; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008806 (gene) of Snake gourd v1 genome

Gene IDTan0008806
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationLG04:87526456..87528151
RNA-Seq ExpressionTan0008806
SyntenyTan0008806
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]2.9e-3775.14Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR
        MER LTTLIFVISGFAFS+LSLLVE+QT D AN +LSPP  SPPP   P PSPPPP  PPPPP  PPPPPP    PPP PSPPP S SPPPPP  HR RR
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR

Query:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        SPPP  ASS E KK  P VP  + N NQ S RSLNKGKKVGLFFVGIAAVLQICVV FLVFKRRQLLR KDRY+GFS
Subjt:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]3.4e-3874.58Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR
        MER LTTLIFVI+GFAFS+LSLLVE+QT DGAN     P LSPP P SPPPSP PP PP PPP  PP PPP  +PPPP PSPPP   SPPPPPP HR RR
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR

Query:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        +PPP  ASS E KK  P VP  + N NQGS RSLNKGKKVGLFFVGIAAVLQICVV FLVFKRRQLLR KDRY+GFS
Subjt:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

XP_022948467.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]6.5e-3772.73Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPP--PPPPIFSP---PPPHP---SPPPPSSSPPP-
        MER  +TLIFVISGFAFSILSLLVE+Q +DGA  S SPP   PPPPPSPPP  PPP PPPPPPLSPP  PPPP  SP   PPP P   SPPPP   PPP 
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPP--PPPPIFSP---PPPHP---SPPPPSSSPPP-

Query:  -PPPRHRRRRSPPPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
         P  +HR    PPP PASS  NKKPP V RN+N++N +GS RSLN GKKVGLFFVGIAAVLQICVV FLVFKRRQLLRFKDRYDGFS
Subjt:  -PPPRHRRRRSPPPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

XP_023523257.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]8.5e-3771.5Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPP---PPLSPPPPPPIFSPPPPH---PSPPPPSSSPP----
        MER  +TLIFVISGFAFSILSLLVE+Q +DGA SS SPP   PPPP  PPPSPPPP PPPP   PP SPPPP P F PPPP    P PPP SSSPP    
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPP---PPLSPPPPPPIFSPPPPH---PSPPPPSSSPP----

Query:  PPPP-----RHRRRRSP-PPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        PPPP     +HR    P PP PASS  NKKPP V RN+N++N +GS RSLN GKKVGLFFVGIAAVLQICVV FLVFKRRQLLRFKDRYDGFS
Subjt:  PPPP-----RHRRRRSP-PPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]2.8e-4076.84Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPP-PPRHRRR
        MER LTTLIFVISGFAFS+LSLLVE+QTQDGAN +LSPP  S PPPPSPPP PPP SP PPPP  PPPPPPI SPPPP  SP PP  SPPPP P     R
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPP-PPRHRRR

Query:  RSPPPFPASSQENKKPPRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        R PPPF AS    K PP  P+N NN NQGS RSLNKGKKVGLFFVGIAAVLQICVV FLVFKRRQLLR KDRY+GFS
Subjt:  RSPPPFPASSQENKKPPRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein2.0e-3975.14Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR
        MER LTTLIFVI+GFAFS+LSLLVE+QT DGAN     P LSPP P SPPPSP PP PP PPP  PPPPPP  +PPPP PSPPP   SPPPPPP HR RR
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR

Query:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        +PPP  ASS E KK  P VP  + N NQGS RSLNKGKKVGLFFVGIAAVLQICVV FLVFKRRQLLR KDRY+GFS
Subjt:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

A0A1S3CKG6 leucine-rich repeat extensin-like protein 31.4e-3775.14Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR
        MER LTTLIFVISGFAFS+LSLLVE+QT D AN +LSPP  SPPP   P PSPPPP  PPPPP  PPPPPP    PPP PSPPP S SPPPPP  HR RR
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRR

Query:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        SPPP  ASS E KK  P VP  + N NQ S RSLNKGKKVGLFFVGIAAVLQICVV FLVFKRRQLLR KDRY+GFS
Subjt:  SPPPFPASSQENKKP-PRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

A0A6J1DGD7 proline-rich receptor-like protein kinase PERK92.1e-2560.99Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSL--SPPFLSPPPPPSPP-PSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHR
        MER LTT IFVISGFAFSILSLLVE Q QD  NS +  SPP L  PPP SP  P P PPSPP P PLSPPPP P+                  PPPPR R
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSL--SPPFLSPPPPPSPP-PSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHR

Query:  RRRSPPPFPASSQENKKPP--RVPRNSNNNNQGSNRS-LNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
        R  SPPP  ASS  N+ P      + +N  NQ   RS LNKGK+VGLFFVGIAAVLQ+CVV FLVFKRRQLLRFK++Y+ FS
Subjt:  RRRSPPPFPASSQENKKPP--RVPRNSNNNNQGSNRS-LNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

A0A6J1G9A4 leucine-rich repeat extensin-like protein 33.1e-3772.73Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPP--PPPPIFSP---PPPHP---SPPPPSSSPPP-
        MER  +TLIFVISGFAFSILSLLVE+Q +DGA  S SPP   PPPPPSPPP  PPP PPPPPPLSPP  PPPP  SP   PPP P   SPPPP   PPP 
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPP--PPPPIFSP---PPPHP---SPPPPSSSPPP-

Query:  -PPPRHRRRRSPPPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS
         P  +HR    PPP PASS  NKKPP V RN+N++N +GS RSLN GKKVGLFFVGIAAVLQICVV FLVFKRRQLLRFKDRYDGFS
Subjt:  -PPPRHRRRRSPPPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS

A0A6J1KAI1 leucine-rich repeat extensin-like protein 31.6e-3667.66Show/hide
Query:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSP-PPPPSPPPSPPPPSPPPPPPLSPP-------------------PPPPIFSPPPP--
        MER L+T IFVISGFAFSILSLLVE+Q +DGA SS SPP   P PPPPSPPP PPP SPP  PPLSPP                   PPPPIF PPPP  
Subjt:  MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSP-PPPPSPPPSPPPPSPPPPPPLSPP-------------------PPPPIFSPPPP--

Query:  HPSPPPPSSSPPPPPP--RHRRRRSPPPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGF
         PS PPP   PPP PP  +HR    PPP PASS  NKKPP V RN+N++N +GS RSLN GKKVGLFFVGIAAVLQICVV FLVFKRRQLLRFKD+YDGF
Subjt:  HPSPPPPSSSPPPPPP--RHRRRRSPPPFPASSQENKKPPRVPRNSNNNN-QGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGF

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54215.1 proline-rich family protein1.4e-0846.89Show/hide
Query:  IFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPP---------LSPPPPP------PIFSPPPPHPSPPPPSSSPPPPP
        +F+++ F F+I   L+  Q+QD      SPP   PPPPP PPP PPPP PPPPPP         + PPPPP      P+ SPPPP    PPP S PPP P
Subjt:  IFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPP---------LSPPPPP------PIFSPPPPHPSPPPPSSSPPPPP

Query:  PRHRRRRSPPPFPASSQENKKPPRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKD
        P+    R  PP          PPR P     +       LNKGK VGL FVG+ A+LQ+ VV FLVFKR+QLL  KD
Subjt:  PRHRRRRSPPPFPASSQENKKPPRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGCTATTGACTACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTATTTTGTCGCTTCTTGTTGAGGCTCAGACTCAAGATGGAGCCAATTCTTCTCTCTC
GCCGCCGTTTTTGTCGCCGCCTCCGCCTCCATCTCCTCCACCGTCTCCACCGCCTCCATCTCCGCCACCGCCACCTCCGCTATCGCCACCGCCACCACCCCCAATCTTCT
CACCGCCTCCACCACATCCATCTCCGCCTCCGCCCTCATCTTCCCCACCGCCTCCTCCGCCGCGTCACCGTCGTCGTCGTAGTCCGCCGCCCTTTCCTGCATCCTCCCAA
GAGAATAAAAAACCACCACGAGTGCCTCGGAATAGCAACAATAATAATCAAGGGTCGAATAGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGC
CGCAGTACTTCAAATCTGTGTGGTGGCATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGATTCAAGGACCGATATGATGGTTTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
AATCAATCGCCCTAAAATAGCTTCAACTGTTGAAGTCCGCGTAAGCTCTCTCTTCCCCACCTTCAACCCATTTTATTTTGCCTCCTTTTCTTTCTCATTCCTTCTCAGAA
GGTGAGAACAAACAAAGAAGATCATCACTGTGACTCAGTCAATCGCACATTGGACTTAATTGCCTCTTTTCCCTTCTCTCTCAACCACCAATTTCCCCTTCTTATGCTCT
TCTTCTTTTTCCCATTTCAATCCCACACTTTGAGGAACCCCCAGATTCCAGGCCTTCCCAATGGCCCTCTGCAGATGATTTTATCTGTTTCTTAATCCTTTCTTCTGCAG
ATTTTTATTTGGGGTTCGTTTTTATGTTCGGAATTTGGGGCACATTGTTCGTAATTTGAATCCGGGTTCTGATTTTTTTGGGTGTCAAACCCTAGCGGGTTGAATCTGGC
TGCGAATCTTTGTGGGTGTTGAGGATTTTTGGGTTTCGATGTTTGGAGGGGGGATTTGAGCGGTTGGGAACGAACCCCTTTTGGCGAACGGCAAGAAATTTGCGTGTTGT
TTTGAATTTGGGAGTTTTGGGTAAAACCCAGATGCGAGGGAGGTCTGGAAATTTGAATTTGTATCCTGATTTTCTTTGATTAATTGCTCTTCTATGCAATGGAACGGCTA
TTGACTACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTATTTTGTCGCTTCTTGTTGAGGCTCAGACTCAAGATGGAGCCAATTCTTCTCTCTCGCCGCCGTTTTT
GTCGCCGCCTCCGCCTCCATCTCCTCCACCGTCTCCACCGCCTCCATCTCCGCCACCGCCACCTCCGCTATCGCCACCGCCACCACCCCCAATCTTCTCACCGCCTCCAC
CACATCCATCTCCGCCTCCGCCCTCATCTTCCCCACCGCCTCCTCCGCCGCGTCACCGTCGTCGTCGTAGTCCGCCGCCCTTTCCTGCATCCTCCCAAGAGAATAAAAAA
CCACCACGAGTGCCTCGGAATAGCAACAATAATAATCAAGGGTCGAATAGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTACTTCA
AATCTGTGTGGTGGCATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGATTCAAGGACCGATATGATGGTTTTTCTTGAATCAATTGGCATCTGTTTTCTTCGTCTTACA
ACAGAGCCGAGGACTTTAGAAGTATTCTTGAGGATATTACGGCTATTGAGCTAACAGAATTGAATCACCTGCTAAAAAAAAAGCCAACAATTGGATAAATTTTCGAGTCT
TTTGGTTGGGAAGATGCAAAAAACTTGTTCTTTAGAGGCTGCACAAAAGAAGATGAAACGGAGCAGGCAGCAGGCCGATAAATGGGGGGCTAGCATCTTCTCTTAGGCTT
TCCTCAGGTGTTGTGTAAAAATGGGTACATGATATGATTGGTTGAGTTTTTTCTTGTGATTTTTGAATTCTTGTTCATTCTTTTGTCCAATTCTGATTATACAGTTTATT
AATTCAAAGCAGAAGAAAGCGTCTTGATATACCCCCCAATCTTTGTTGTTGAATTCTTTTTCTGCTAACCTCTGTTCCTTATGGCTGTAAAAGATTGTCTTTGTCTAATA
TCACAAACTAATTATGAGCTGAATCTCTACTTTCTCCTTGCTCGAG
Protein sequenceShow/hide protein sequence
MERLLTTLIFVISGFAFSILSLLVEAQTQDGANSSLSPPFLSPPPPPSPPPSPPPPSPPPPPPLSPPPPPPIFSPPPPHPSPPPPSSSPPPPPPRHRRRRSPPPFPASSQ
ENKKPPRVPRNSNNNNQGSNRSLNKGKKVGLFFVGIAAVLQICVVAFLVFKRRQLLRFKDRYDGFS