; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008816 (gene) of Snake gourd v1 genome

Gene IDTan0008816
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRAB6-interacting golgin
Genome locationLG08:69525227..69527718
RNA-Seq ExpressionTan0008816
SyntenyTan0008816
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137876.1 GRB10-interacting GYF protein 2 [Cucumis sativus]5.1e-7699.4Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_008442808.1 PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]2.3e-76100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022144720.1 uncharacterized protein LOC111014340 [Momordica charantia]9.4e-7094.01Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQ E  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYK+AL+AFN+KNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022945279.1 uncharacterized protein LOC111449572 [Cucurbita moschata]2.2e-7497.6Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_038903091.1 GRB10-interacting GYF protein 2-like [Benincasa hispida]4.4e-7598.8Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

TrEMBL top hitse value%identityAlignment
A0A0A0LGI7 RAB6-interacting golgin2.5e-7699.4Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A1S3B6L6 RAB6-interacting golgin1.1e-76100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A5D3DPH8 RAB6-interacting golgin1.1e-76100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1G0J9 RAB6-interacting golgin1.0e-7497.6Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1KYK3 RAB6-interacting golgin1.0e-7497.6Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

SwissProt top hitse value%identityAlignment
B1H222 RAB6-interacting golgin9.3e-0430.33Show/hide
Query:  RAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLM
        R  EE+ +RKK  + + +  +  R + ET +L  I++EL+AL D +  ++  +R RID  + E         + E EY  A      K + K QL   L 
Subjt:  RAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLM

Query:  ELVSESERLRLKKLEELSKNID
         ++ ++E  + +KLEEL + +D
Subjt:  ELVSESERLRLKKLEELSKNID

Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)3.1e-5571.43Show/hide
Query:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA
        QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLME   LV ESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI

AT2G36410.2 Family of unknown function (DUF662)7.5e-5772.73Show/hide
Query:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA
        QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT2G36410.3 Family of unknown function (DUF662)1.1e-5572.12Show/hide
Query:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA
        QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKK  EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G09980.1 Family of unknown function (DUF662)3.2e-6083.22Show/hide
Query:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKE
        +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA IREELE LADPMRKEVA VRK+ID+VNKELKPLGHT QKKE
Subjt:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKE

Query:  KEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        +EYKEALEAFN+KN+EKVQLIT+LMELV ESE++R+KKLEELSKNID+I
Subjt:  KEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G52920.2 Family of unknown function (DUF662)3.5e-5475.47Show/hide
Query:  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKEL
        Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGRVEEET+RLA IREELE +ADPMRKEV  VRK+ID+VNKEL
Subjt:  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKEL

Query:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT
        KPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LRLKKL+ELS++IDT
Subjt:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCAGAACAAGCTCAACAACAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTC
GGCTCTTTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCC
TCGCTTGTATCCGTGAGGAACTCGAGGCGCTTGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGATGCAGTAAACAAGGAATTAAAGCCTCTGGGA
CATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGA
AAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATCCGGTAA
mRNA sequenceShow/hide mRNA sequence
GCTAAGCTGGGTTGGCACTTTCGAAAGCAATTCTAGTTTTATAAGCACTTGCAGTTGCAGTACCCACACAGCTGAAAAAAAATTGAAATACAGCACAAACCCCATAATCA
TTTCAAAAGCAAAAGCAAAAGAAGAGAGAGAAAAACAAAAACCCAAAAGCCAAAACCAAAAACAGAGAGAGAGAGAGAGAAAGCAACAAACCCAGAAAGAAAGGAAGAAG
AAGAAGAAGAAGAAGAACAACAACAACAACAACAGAGAAACTGAAGGAAATTCAAAGAAGAAGAAAAAGGGTTTTGTGGTTAAGAAGATGCAGCCAGAACAAGCTCAACA
ACAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTTTCCACTTTCAGAGCCA
AAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTCGCTTGTATCCGTGAGGAACTC
GAGGCGCTTGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGATGCAGTAAACAAGGAATTAAAGCCTCTGGGACATACCTGTCAAAAGAAGGAAAA
AGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGA
AGCTGGAGGAGCTGAGTAAGAACATAGATACGATCCGGTAAATGAATTGATTGATTGATTGATTGATTGGAGCGACCGATGACAAAGTGATAACCCCCTGTTTATTAGGC
TTTGGTGTGTGATGTATTTAGTATAAAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTGTGTTTGGGTGTATTTTTATAATTTGTCTTTGT
TTGTTTATTTTTCCTCTAGAGAAGTTACTCAAAAACATTTAACTGATTTTAGGAAGGGAAATGCCCTATAAACAGGTTTGTAACTCATCTCAGCCTTTGATTTTTTTTTT
CCTTTTTCTTTTTCCCCTCCCCTCTTCTCTCCTCAATTTCATTCTCCCTCTCTCTAGAATGAGGGAAAAATCAAATTAGTTGAAGTTTAAATACATGTAATGTTGAAATG
TTTCTAAACCCAAGAGTTAATTGACTTGTTTGAATTACCTTA
Protein sequenceShow/hide protein sequence
MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLG
HTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR