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Tan0008825 (gene) of Snake gourd v1 genome

Gene IDTan0008825
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG01:74702895..74703137
RNA-Seq ExpressionTan0008825
SyntenyTan0008825
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]8.3e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN RM EG SV EHVLNMMVHFNV E+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]6.4e-2473.42Show/hide
Query:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        +T KEIM SLQ+MFGQPS   R++ALK+VYN RMKEG+SV EHVLN+MVHFNV E NG+VIDE SQ SFI+ESLPK+FL
Subjt:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]4.9e-2474.68Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSF
        M+TAKEIM SLQA+FGQPSSS  +DA+K+VYN RMKEG +V EHVL+MMVHFN+TEVN  V++E SQV FIMESLPKSF
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSF

XP_038880476.1 uncharacterized protein LOC120072136 [Benincasa hispida]1.3e-2474.68Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSF
        M+ AKEIM SLQA+FGQPSSS  +DA+KYVYNFRMKEGT+V EHVL+MMVHFN+ EVNG V++E +Q  FIMESLPKSF
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSF

XP_038895766.1 uncharacterized protein LOC120083930 [Benincasa hispida]3.7e-2476.92Show/hide
Query:  TAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        TAKEIM SL+ MF QPS S+R+DA+KYVYN RMKEGTSV EHVLNMMVHFNVTE+N  +ID+ SQVSFI+ESL KSFL
Subjt:  TAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN RM EG SV EHVLNMMVHFNV E+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

A0A5A7TU93 Gag/pol protein4.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN RM EG SV EHVLNMMVHFNV E+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

A0A5A7V4M1 Gag/pol protein4.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN RM EG SV EHVLNMMVHFNV E+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

A0A5D3CPJ6 Gag/pol protein4.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN RM EG SV EHVLNMMVHFNV E+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

A0A6J1DWL0 uncharacterized protein LOC1110247343.1e-2473.42Show/hide
Query:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL
        +T KEIM SLQ+MFGQPS   R++ALK+VYN RMKEG+SV EHVLN+MVHFNV E NG+VIDE SQ SFI+ESLPK+FL
Subjt:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCGTCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTTCCGAATGAAGGA
GGGAACTTCTGTTAGCGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGACAGAAGTAAACGGGGTTGTCATAGATGAGAACAGTCAGGTCAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCGTCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTTCCGAATGAAGGA
GGGAACTTCTGTTAGCGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGACAGAAGTAAACGGGGTTGTCATAGATGAGAACAGTCAGGTCAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGTAG
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNFRMKEGTSVSEHVLNMMVHFNVTEVNGVVIDENSQVSFIMESLPKSFL