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Tan0008868 (gene) of Snake gourd v1 genome

Gene IDTan0008868
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionselenoprotein K
Genome locationLG11:11208526..11211279
RNA-Seq ExpressionTan0008868
SyntenyTan0008868
Gene Ontology termsGO:0006816 - calcium ion transport (biological process)
GO:0032469 - endoplasmic reticulum calcium ion homeostasis (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024491 - Selenoprotein SelK/SelG


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140863.1 selenoprotein K isoform X1 [Cucumis sativus]2.2e-50100Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

XP_008445670.1 PREDICTED: selenoprotein K [Cucumis melo]3.8e-5098.02Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

XP_022938384.1 selenoprotein K-like [Cucurbita moschata]7.2e-4998.04Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPY-GGRPRGPPRGLDNVRGIDHSSLPACGSC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPY GGRPRGPPRGLDNVRGIDHSSLPACGSC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPY-GGRPRGPPRGLDNVRGIDHSSLPACGSC

Query:  CG
        CG
Subjt:  CG

XP_022964558.1 selenoprotein K-like [Cucurbita moschata]2.9e-5099.01Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

XP_022993311.1 selenoprotein K-like [Cucurbita maxima]1.5e-4998.02Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A0A0KDW6 Uncharacterized protein1.1e-50100Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

A0A1S3BE45 selenoprotein K1.9e-5098.02Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

A0A6J1HI52 selenoprotein K-like1.4e-5099.01Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

A0A6J1JQF6 selenoprotein K1.4e-5099.01Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

A0A6J1JVZ4 selenoprotein K-like7.1e-5098.02Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC
        MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCC
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCC

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
Q2EN82 Selenoprotein K7.4e-0434.83Show/hide
Query:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG
        M Y+  G     RS   WRL  ITDFFW I   + +FF TL   +  +    G  S  ++D       G GP G  PR   R ++++RG
Subjt:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG

Q32PE3 Selenoprotein K1.9e-0434.83Show/hide
Query:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG
        M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    GS S  ++D       G GP G  PR     +++++G
Subjt:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG

Q4R8M1 Selenoprotein K1.1e-0435.96Show/hide
Query:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG
        M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    G+ S  ++D       G GP G  PR   R ++++RG
Subjt:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG

Q6S9C4 Selenoprotein K8.7e-0535.71Show/hide
Query:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLF--SMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLP
        M Y+  G V   RS   WRL  ITDFFW I   + +FF TL    ++K   YR  S S +  DG GP           P  PPR +  +  +   S P
Subjt:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLF--SMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLP

Q9Y6D0 Selenoprotein K1.1e-0435.96Show/hide
Query:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG
        M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    G+ S  ++D       G GP G  PR   R ++++RG
Subjt:  MAYVERGVVKSQRSF--WRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRG

Arabidopsis top hitse value%identityAlignment
AT4G08230.1 glycine-rich protein6.1e-3063.72Show/hide
Query:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------
        MAYVE GVVK++R  WRL+TI DFF +I+N+I VFF T+FSMEKS+AYRKGS   KKW      GGG GG   G  GGR  GPPR GLDNVRG+      
Subjt:  MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------

Query:  DHSSLPACGSCCG
        DH+SLPACGSCCG
Subjt:  DHSSLPACGSCCG

AT4G08230.2 glycine-rich protein2.3e-1362.5Show/hide
Query:  MEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG
        MEKS+AYRKGS   KKW      GGG GG   G  GGR  GPPR GLDNVRG+      DH+SLPACGSCCG
Subjt:  MEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTTGAACGAGGCGTTGTGAAATCCCAGAGATCATTTTGGCGTCTGAAAACCATAACTGATTTCTTTTGGGCCATTGTAAACGTTATCGGTGTGTTTTTTAC
CACCTTGTTCTCGATGGAAAAATCAGAGGCTTATAGAAAAGGATCTGGCTCTGGCAAGAAATGGGACGGTGGTGGCCCTGGAGGTCCCGGGTCGGGGCCTTATGGTGGTC
GTCCACGTGGTCCTCCTCGTGGTCTCGATAACGTTCGAGGGATCGATCATAGTTCATTACCTGCCTGTGGCTCGTGCTGCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTTTAAGAGATATCTTAAAATATGACGTAGCTCTAACCAATCAAAATTCCCGCAAATCATCATAAAAAAGGAAGGCGGAAATTTCCAGATGATCCTAAACCCAAG
AGAACGGTAGTTCGACCTTCAGCTTTTAGAATATCGCTTTTCTTTCTCTTCGACTCCGAGAAGGATCTCCAAGCTCTCCCATGGCGTACGTTGAACGAGGCGTTGTGAAA
TCCCAGAGATCATTTTGGCGTCTGAAAACCATAACTGATTTCTTTTGGGCCATTGTAAACGTTATCGGTGTGTTTTTTACCACCTTGTTCTCGATGGAAAAATCAGAGGC
TTATAGAAAAGGATCTGGCTCTGGCAAGAAATGGGACGGTGGTGGCCCTGGAGGTCCCGGGTCGGGGCCTTATGGTGGTCGTCCACGTGGTCCTCCTCGTGGTCTCGATA
ACGTTCGAGGGATCGATCATAGTTCATTACCTGCCTGTGGCTCGTGCTGCGGCTAAGTTTTTGGCTGCTTCCATGGTGCATTTACACAAAGCTGTCTAGAAAATGTTATT
TCAATTTAAAATCGTGGGACGTCTTGTACATGTTGATGGAATATTATCTTATTATCTGCGAATATAAATTAGTTTCTCAACTCTGTATTTAAATCCTAATTTGTTAAATA
CGAAAGTGTATTTGGTTGGTAAATTTTAAATTTCTAATAAATAATATAAATT
Protein sequenceShow/hide protein sequence
MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG