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Tan0008875 (gene) of Snake gourd v1 genome

Gene IDTan0008875
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:77907924..77908589
RNA-Seq ExpressionTan0008875
SyntenyTan0008875
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052718.1 hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]2.3e-1482.69Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT
        M G RSD I GA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSP+TRRT
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT

KAG2689810.1 hypothetical protein I3760_09G156900 [Carya illinoinensis]3.4e-1077.08Show/hide
Query:  GSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTR
        G+RS  ING ++S R SGRPIPKRGQVKLGI+VGLAHSVASIFSP  R
Subjt:  GSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTR

KAG8490863.1 hypothetical protein CXB51_014741 [Gossypium anomalum]5.8e-1064.71Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRR
        MGG+R++ IN  + SPR++GRPIP+RG+VK+ I+VG+AHSVASIFS S+RR
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRR

KGN49191.1 hypothetical protein Csa_004352 [Cucumis sativus]6.2e-1275Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT
        M  SR+  I  A YSPR+S RP PKRGQVKLGIMVGLAH+VASIFSP+TRRT
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT

XP_022977341.1 uncharacterized protein LOC111477692 [Cucurbita maxima]1.3e-1796Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTR
        MGGSRSDDI+GATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSP+TR
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTR

TrEMBL top hitse value%identityAlignment
A0A0A0KN78 Uncharacterized protein3.0e-1275Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT
        M  SR+  I  A YSPR+S RP PKRGQVKLGIMVGLAH+VASIFSP+TRRT
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT

A0A5A7UBX7 Uncharacterized protein1.1e-1482.69Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT
        M G RSD I GA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSP+TRRT
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT

A0A5D2UXY7 Uncharacterized protein3.7e-1064.71Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRR
        M G+R + ING  YSPR +GRPIP+RGQVK+ I++G+AHS ASIFS S+RR
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRR

A0A5J5VQ30 Uncharacterized protein3.7e-1064.71Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRR
        M G+R + ING  YSPR +GRPIP+RGQVK+ I++G+AHS ASIFS S+RR
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRR

A0A6J1IJM3 uncharacterized protein LOC1114776926.3e-1896Show/hide
Query:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTR
        MGGSRSDDI+GATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSP+TR
Subjt:  MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGTTCCAGAAGCGACGACATCAACGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGAGGGGACAGGTCAAATTGGGGATCATGGTGGGTCT
CGCTCACTCCGTTGCTTCCATTTTCTCGCCCTCAACTCGCCGGACCTAG
mRNA sequenceShow/hide mRNA sequence
TTTTGGTATTGTGTTTTTATAAACATGGAATCTTACAGTTACAGAGTGTGGTGGTGGGACTGGGACAAAGCAGAGCAGCGCTGCGCTGTCATGGCGCATAACCCACCGTC
TTTGTCTCAAATCGCCATGTGAACTAATCTTTATTTATTTATTTTTAAATGTCAATAATTCTCTTCCCTCTTGCTTTATTCTGTCCCCTTTCTTCTCTCTATATAAATTT
CTAATTTCCATCAAACTCCACATTAAACTTTCACAGCTTTATAAATTATAATCAATCCTCCCGCCGGCATAATTTCTCAGTGAAGTGAAGCGGAGCGGCAATTTCAGTCA
GAGATGGGCGGTTCCAGAAGCGACGACATCAACGGCGCCACGTACTCTCCCAGGAGTTCTGGCCGTCCGATTCCGAAGAGGGGACAGGTCAAATTGGGGATCATGGTGGG
TCTCGCTCACTCCGTTGCTTCCATTTTCTCGCCCTCAACTCGCCGGACCTAGATTCCACCGGATTGAACCGGCCCGTTTTCTTTTTCTTTTTACGCTTTCATGTTATAGC
TTATAATGGAAGAGAAAGGGCAAGCAGAGCTGTTTTTAGTTTTTGGTTTCTGTTGTAAAAAGGAGAGTTTTTTTTTTCTTTTTTCAATTAATGGAAAATGGAGATTTTGT
TGTTCT
Protein sequenceShow/hide protein sequence
MGGSRSDDINGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPSTRRT