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Tan0008881 (gene) of Snake gourd v1 genome

Gene IDTan0008881
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box/WD repeat-containing protein 4
Genome locationLG04:83108845..83109575
RNA-Seq ExpressionTan0008881
SyntenyTan0008881
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650936.1 hypothetical protein Csa_001741 [Cucumis sativus]3.0e-2796.92Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCST
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVWLRVLDC+LCST
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCST
KAG6581581.1 hypothetical protein SDJN03_21583, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2796.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVW RVLDCVLCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
XP_011651782.1 uncharacterized protein LOC105434940 [Cucumis sativus]7.8e-2896.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVWLRVLDC+LCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
XP_022934952.1 uncharacterized protein LOC111441965 [Cucurbita moschata]1.7e-2796.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVW RVLDCVLCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
XP_038905300.1 uncharacterized protein LOC120091370 [Benincasa hispida]1.0e-2795.45Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLY+PPLRSFNLFVETMEEI RESRTYTNRVYPRARHVWLRVLDC+LCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
TrEMBL top hitse value%identityAlignment
A0A0A0LD25 Uncharacterized protein3.8e-2896.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVWLRVLDC+LCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
A0A1S4E3E9 uncharacterized protein LOC1079918653.8e-2896.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVWLRVLDC+LCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
A0A6J1DEC8 uncharacterized protein LOC1110202773.2e-2795.45Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFT+AFSAVPLTLYVPPLRS NLFVETMEEI RESRTYTNRVYPRARHVWLRVLDCVLCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
A0A6J1F484 uncharacterized protein LOC1114419658.5e-2896.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVW RVLDCVLCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
A0A6J1J7E0 uncharacterized protein LOC1114819238.5e-2896.97Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEI RESRTYTNRVYPRARHVW RVLDCVLCSTR
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein1.0e-1760.61Show/hide
Query:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR
        MLQ FFT+AFSA PLTLY+PP+R   +FVETMEE+  E R Y+ R++PRAR  W R+LDC   S+R
Subjt:  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAGTTCTTCTTTACGGTGGCTTTTTCGGCAGTTCCTTTGACTCTTTACGTTCCGCCGCTCCGCAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATATTTCG
GGAGTCGAGAACGTACACCAATCGGGTGTATCCGCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTGTTCTTTGCAGCACCAGGTAG
mRNA sequenceShow/hide mRNA sequence
CGGAAAATTTTCCCTGTGGACCCCAGCTACCCGCTCACTACCAGTCTTCCATCTCCATTTGCATCAACTCTATTCTGCAACCTTCCAGACCTCTCTCTCTCATCTCTTTC
TCTCTCCTCCAAAAATACAGACCACAAAATCCAGAGTTTCGAACCCTAGAGCTACAATTTCCTTTGAATTTTACCGGTGATTGTAAGATTCCTTCATCTCTGTGAGCGAT
GTTGCAGTTCTTCTTTACGGTGGCTTTTTCGGCAGTTCCTTTGACTCTTTACGTTCCGCCGCTCCGCAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATATTTCGGG
AGTCGAGAACGTACACCAATCGGGTGTATCCGCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTGTTCTTTGCAGCACCAGGTAGATGATTTTTTTTTTTTTCATC
TCTAGATTTCGAAGTTCAGGACGCTGATCTCTCTGTATATATTCTTCGATTCTCTTGTTTCTGTCTTTCGTTTGATAAGATTTGGATGAGTGTGGTTATGGTGCTGATTT
AGTCGTTGCGGAATTCTGTTGTAAATTGGTGAATACGACATGTAAGAGGATGCGTTTCAAGTTAATTTCAGAAGAATAAAGAGATGATGTTCATGTTAATATGTGCATAG
TGATGTTCTGTTTCTCACGTTCCATTCAATTTTATTCTGTGCAGCACCGTATATATTCTTCGATTCTCTTG
Protein sequenceShow/hide protein sequence
MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEIFRESRTYTNRVYPRARHVWLRVLDCVLCSTR