; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0008901 (gene) of Snake gourd v1 genome

Gene IDTan0008901
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog isoform X1
Genome locationLG03:68552273..68562303
RNA-Seq ExpressionTan0008901
SyntenyTan0008901
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595172.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.7e-6986.42Show/hide
Query:  IGRYICH---LMLTNILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDG
        IG ++ H   L L  +LT VLDL W+VP GV GTW++L +SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDG
Subjt:  IGRYICH---LMLTNILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDG

Query:  GGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GGWIGAAKFLTG STVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

KAG6604338.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.0e-7191.03Show/hide
Query:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
        RYICHL LTN    VLDLH VV   V GTW+DL+SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
Subjt:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA

Query:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        AKFLTG STVGSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022926166.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]2.0e-7090.38Show/hide
Query:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
        RYICHL LTN    VLDLH VV   V GTW+DL+SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
Subjt:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA

Query:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        AKFLTG STVGSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022972744.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]9.7e-7087.58Show/hide
Query:  GRYICH---LMLTNILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGG
        G ++ H   L L  +LT VLDL WVVP GV GTW+DL +SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGG
Subjt:  GRYICH---LMLTNILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGG

Query:  GWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GWIGAAKFLTG STVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022979005.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]1.4e-6886.54Show/hide
Query:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
        RYICHL LTN    VLDLH  V   + GTW+DL+SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGA
Subjt:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA

Query:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        AKFLTG STVG+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Subjt:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein2.3e-6196.83Show/hide
Query:  LDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAM
        +DL+ AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTG STVGSLAIPIILRHAHMIDTGAM
Subjt:  LDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1EE43 vacuolar protein sorting-associated protein 55 homolog isoform X19.5e-7190.38Show/hide
Query:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
        RYICHL LTN    VLDLH VV   V GTW+DL+SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
Subjt:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA

Query:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        AKFLTG STVGSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X13.4e-6891.84Show/hide
Query:  ILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVST
        +LT VLDL W+VP GV GTW++L +SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTG ST
Subjt:  ILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X14.7e-7087.58Show/hide
Query:  GRYICH---LMLTNILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGG
        G ++ H   L L  +LT VLDL WVVP GV GTW+DL +SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGG
Subjt:  GRYICH---LMLTNILTIVLDLHWVVPHGVPGTWLDL-MSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGG

Query:  GWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GWIGAAKFLTG STVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1IRY1 vacuolar protein sorting-associated protein 55 homolog isoform X16.8e-6986.54Show/hide
Query:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA
        RYICHL LTN    VLDLH  V   + GTW+DL+SAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGA
Subjt:  RYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGA

Query:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        AKFLTG STVG+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Subjt:  AKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 551.5e-0426.55Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEF
        +  L+   +   LL IL+CAL++N++PL   L+++L P+P   F  G+   T   +S         A FLTG+     +A+P++  H  +I   +  +  
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEF

Query:  VSFFIFVCTVLCF
        +   I   +++ F
Subjt:  VSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog1.1e-2652.85Show/hide
Query:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA
        VPG   T LD+    +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTG S VGS+AIP IL+HA
Subjt:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA

Query:  HMIDTGAMFIEFVSFFIFVCTVL
         +I  GA+ ++  S+ +F+  +L
Subjt:  HMIDTGAMFIEFVSFFIFVCTVL

Q9UUH1 Vacuolar protein sorting-associated protein 553.3e-0424.37Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVS
        + GL+ + +   +L IL+CAL+ NW+PLL  + ++L P+P L     ST    +  +    +   +F  G +     A+PI+  +  +I T A  +  V 
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDD
          I    +  + +  ++ +
Subjt:  FFIFVCTVLCFHRVSLEDD

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein7.5e-2852.85Show/hide
Query:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA
        VPG   T LD+    +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTG S VGS+AIP IL+HA
Subjt:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA

Query:  HMIDTGAMFIEFVSFFIFVCTVL
         +I  GA+ ++  S+ +F+  +L
Subjt:  HMIDTGAMFIEFVSFFIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein7.5e-2852.85Show/hide
Query:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA
        VPG   T LD+    +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTG S VGS+AIP IL+HA
Subjt:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA

Query:  HMIDTGAMFIEFVSFFIFVCTVL
         +I  GA+ ++  S+ +F+  +L
Subjt:  HMIDTGAMFIEFVSFFIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein7.5e-2852.85Show/hide
Query:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA
        VPG   T LD+    +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTG S VGS+AIP IL+HA
Subjt:  VPG---TWLDLMSAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHA

Query:  HMIDTGAMFIEFVSFFIFVCTVL
         +I  GA+ ++  S+ +F+  +L
Subjt:  HMIDTGAMFIEFVSFFIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein8.0e-5486.73Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTG STVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein8.0e-5486.73Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTG STVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATCCTCCCCTCCAAGTTCTATATCGGGAGCACCAGTTAACAAAGAACATTGGCAGCAAAGAACGAGAACTGACAGACCAACCCACTGATAGCCAAAGCTGCTT
AAAAAGCTCAAATCTTGCCTTCTTCGTCGCGATTGGGGGCGAGAATCATCCATCACTGCTGCAGGAACTTCTAGCTTGTCATAATGACGATGACATTGGAAGATATATCT
GCCACTTAATGTTAACCAATATTCTAACAATTGTTCTTGATCTTCATTGGGTGGTGCCTCATGGTGTTCCTGGAACATGGTTGGATCTCATGTCTGCAGTGTTAGCTGGG
CTTGCATTTATGTTTTCATCTAGCATCTTGCTACAGATTCTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCC
TTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTTTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACCGGAGTTTCAACTGTGGGAAGTTTAG
CAATTCCTATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATTTTTGTTTGCACTGTGTTGTGCTTCCACCGTGTT
AGCCTTGAAGATGATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATCCTCCCCTCCAAGTTCTATATCGGGAGCACCAGTTAACAAAGAACATTGGCAGCAAAGAACGAGAACTGACAGACCAACCCACTGATAGCCAAAGCTGCTT
AAAAAGCTCAAATCTTGCCTTCTTCGTCGCGATTGGGGGCGAGAATCATCCATCACTGCTGCAGGAACTTCTAGCTTGTCATAATGACGATGACATTGGAAGATATATCT
GCCACTTAATGTTAACCAATATTCTAACAATTGTTCTTGATCTTCATTGGGTGGTGCCTCATGGTGTTCCTGGAACATGGTTGGATCTCATGTCTGCAGTGTTAGCTGGG
CTTGCATTTATGTTTTCATCTAGCATCTTGCTACAGATTCTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCC
TTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTTTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACCGGAGTTTCAACTGTGGGAAGTTTAG
CAATTCCTATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATTTTTGTTTGCACTGTGTTGTGCTTCCACCGTGTT
AGCCTTGAAGATGATTGGTGA
Protein sequenceShow/hide protein sequence
MFNPPLQVLYREHQLTKNIGSKERELTDQPTDSQSCLKSSNLAFFVAIGGENHPSLLQELLACHNDDDIGRYICHLMLTNILTIVLDLHWVVPHGVPGTWLDLMSAVLAG
LAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGVSTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRV
SLEDDW