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Tan0008970 (gene) of Snake gourd v1 genome

Gene IDTan0008970
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontranslocator protein homolog
Genome locationLG01:25223013..25223524
RNA-Seq ExpressionTan0008970
SyntenyTan0008970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3763.31Show/hide
Query:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH
        SS PFK+RPESKYTKAKR LRSLAVS AIPLTLTI VIFLFGRSS HFPN+NR I++A   LLH +      L+ L         GFH GSNALPLYIAH
Subjt:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH

Query:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        LSL+VVWNPLVLVI A  LAFLFC+LD                   DLIKPCL WTAYL A+TYV I L
Subjt:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]1.0e-3763.31Show/hide
Query:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH
        SS PFK+RPESKYTKAKR LRSLAVS AIPLTLTI VIFLFGRSS HFPN+NR I++A   LLH +      L+ L         GFH GSNALPLYIAH
Subjt:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH

Query:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        LSL+VVWNPLVLVI A  LAFLFC+LD                   DLIKPCL WTAYL A+TYV I L
Subjt:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]1.6e-3863.31Show/hide
Query:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH
        SS PFK+RPESKYTKAKR LRSLAVS AIPLTLTI VIFLFGRSS HFPN+NR I++A   LLH +      L+ L         GFH GSNALPLYIAH
Subjt:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH

Query:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        LSL+VVWNPLVLVI A  LAFLFC+LD+                  DLIKPCL WTAYL A+TYV I L
Subjt:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]4.7e-3863.31Show/hide
Query:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH
        SS PFK+RPESKYTKAKR LRSLAVS AIPLTLTI VIFLFGRSS HFPN+NR I++A   LLH +      L+ L         GFH GSNALPLYIAH
Subjt:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH

Query:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        LSL+VVWNPLVLVI A  LAFLFC+LD                   DLIKPCL WTAYL A+TYV I L
Subjt:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

XP_038878873.1 translocator protein homolog [Benincasa hispida]4.7e-3861.4Show/hide
Query:  SPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPNR--PHRLVRL---------GFHGGSNALPLYI
        S S+ PFK+RPESKYTKAKR LRSLAVS AIPL+LTI VIFLFGRS+ HFPN+NR I++    LLH +      L+ L         GFHGGSNALPLYI
Subjt:  SPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPNR--PHRLVRL---------GFHGGSNALPLYI

Query:  AHLSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        AHLSL+VVWNPLVLVI +  LAFLFC+LD+                  DLIKPCL WTAYLSA+TYV I L
Subjt:  AHLSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

TrEMBL top hitse value%identityAlignment
A0A0A0L583 Uncharacterized protein4.7e-3656.42Show/hide
Query:  MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMALLHPNRPHRLVRL--------------------GFHGG
        MPS S+ PFK+RPESKYTKAKR LRSLAVS AIP++LTI  IFLFGRSS H+PN+NR I++       P  L++L                    GFHGG
Subjt:  MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMALLHPNRPHRLVRL--------------------GFHGG

Query:  SNALPLYIAHLSLNVVWNPLVLVICAFFLAFLFCILD------------------YDLIKPCLTWTAYLSALTYVLIVL
        SNALPLYIAHLSL+VVWNPLVLVI +  +AFLFC+LD                   DL+KPCL WTAYLSA+TYV I L
Subjt:  SNALPLYIAHLSLNVVWNPLVLVICAFFLAFLFCILD------------------YDLIKPCLTWTAYLSALTYVLIVL

A0A1S4DTF2 translocator protein homolog1.2e-3659.54Show/hide
Query:  MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLI-----FMALLHPNRPHRLVRL---------GFHGGSNALPL
        MPS S+ PFK+RPESKYTKAKR LRSLAVS AIP++LTI VIFLFGRSS HFPN+NR I     ++  L       LV L         GFHGGSNALPL
Subjt:  MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLI-----FMALLHPNRPHRLVRL---------GFHGGSNALPL

Query:  YIAHLSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        YIAHLSL+VVW+PLVLVI +  +AFLFC+LD+                  DL+KPCL WTAYLSA+TYV I L
Subjt:  YIAHLSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

A0A5D3CWC4 Translocator protein-like protein1.2e-3659.54Show/hide
Query:  MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLI-----FMALLHPNRPHRLVRL---------GFHGGSNALPL
        MPS S+ PFK+RPESKYTKAKR LRSLAVS AIP++LTI VIFLFGRSS HFPN+NR I     ++  L       LV L         GFHGGSNALPL
Subjt:  MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLI-----FMALLHPNRPHRLVRL---------GFHGGSNALPL

Query:  YIAHLSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        YIAHLSL+VVW+PLVLVI +  +AFLFC+LD+                  DL+KPCL WTAYLSA+TYV I L
Subjt:  YIAHLSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

A0A6J1FZS9 translocator protein homolog5.1e-3863.31Show/hide
Query:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH
        SS PFK+RPESKYTKAKR LRSLAVS AIPLTLTI VIFLFGRSS HFPN+NR I++A   LLH +      L+ L         GFH GSNALPLYIAH
Subjt:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH

Query:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        LSL+VVWNPLVLVI A  LAFLFC+LD                   DLIKPCL WTAYL A+TYV I L
Subjt:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

A0A6J1ICB9 translocator protein homolog7.8e-3963.31Show/hide
Query:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH
        SS PFK+RPESKYTKAKR LRSLAVS AIPLTLTI VIFLFGRSS HFPN+NR I++A   LLH +      L+ L         GFH GSNALPLYIAH
Subjt:  SSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMA---LLHPN--RPHRLVRL---------GFHGGSNALPLYIAH

Query:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL
        LSL+VVWNPLVLVI A  LAFLFC+LD+                  DLIKPCL WTAYL A+TYV I L
Subjt:  LSLNVVWNPLVLVICAFFLAFLFCILDY------------------DLIKPCLTWTAYLSALTYVLIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTCCTTCCTCTTCACCCTTCAAAACTAGACCAGAATCCAAATACACCAAGGCCAAGAGAGTGCTCCGATCCCTCGCTGTCTCCGCCGCCATTCCTCTCACCCT
CACAATCGTCGTCATCTTCCTCTTCGGTCGCTCCTCTCACCATTTCCCCAATCAGAATCGTCTGATTTTTATGGCGCTCCTCCATCCTAATCGACCTCATCGCCTGGTTC
GTTTGGGCTTCCACGGCGGCTCCAATGCCCTTCCCCTCTACATCGCGCATCTTTCCCTCAACGTCGTTTGGAATCCTCTAGTGCTCGTGATTTGTGCCTTCTTCCTTGCG
TTTTTGTTCTGCATTTTGGATTATGATCTAATTAAGCCATGTTTGACTTGGACTGCGTATCTCTCTGCTCTTACTTATGTGCTTATTGTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTCCTTCCTCTTCACCCTTCAAAACTAGACCAGAATCCAAATACACCAAGGCCAAGAGAGTGCTCCGATCCCTCGCTGTCTCCGCCGCCATTCCTCTCACCCT
CACAATCGTCGTCATCTTCCTCTTCGGTCGCTCCTCTCACCATTTCCCCAATCAGAATCGTCTGATTTTTATGGCGCTCCTCCATCCTAATCGACCTCATCGCCTGGTTC
GTTTGGGCTTCCACGGCGGCTCCAATGCCCTTCCCCTCTACATCGCGCATCTTTCCCTCAACGTCGTTTGGAATCCTCTAGTGCTCGTGATTTGTGCCTTCTTCCTTGCG
TTTTTGTTCTGCATTTTGGATTATGATCTAATTAAGCCATGTTTGACTTGGACTGCGTATCTCTCTGCTCTTACTTATGTGCTTATTGTTCTTTGA
Protein sequenceShow/hide protein sequence
MPSPSSSPFKTRPESKYTKAKRVLRSLAVSAAIPLTLTIVVIFLFGRSSHHFPNQNRLIFMALLHPNRPHRLVRLGFHGGSNALPLYIAHLSLNVVWNPLVLVICAFFLA
FLFCILDYDLIKPCLTWTAYLSALTYVLIVL