CuGenDBv2

Gene ID	Tan0009052
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Photosystem I iron-sulfur center
Genome location	Contig00124:47512..48027
RNA-Seq Expression	Tan0009052
Synteny	Tan0009052
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR017491 - Photosystem I protein PsaC IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

YP_001122848.1 photosystem I subunit VII [Phaseolus vulgaris]

6.7e-42

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009138437.1 photosystem I subunit VII [Lathyrus davidii]

1.5e-41

98.77

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        M+HSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009141471.1 photosystem I subunit VII [Lathyrus tingitanus]

8.7e-42

98.77

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009236328.1 photosystem I subunit VII [Gynostemma pentaphyllum]

1.9e-41

98.77

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCK KQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009334710.1 photosystem I subunit VII [Camassia scilloides]

1.5e-41

98.77

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGL+Y
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

TrEMBL top hits

e value

%identity

Alignment

A0A218KGA0 Photosystem I iron-sulfur center

3.2e-42

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A0A410HFC6 Photosystem I iron-sulfur center

3.2e-42

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A0A6M8P9Q0 Photosystem I iron-sulfur center

3.2e-42

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

D5MAH2 Photosystem I iron-sulfur center

3.2e-42

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

G3ETV0 Photosystem I iron-sulfur center

3.2e-42

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

SwissProt top hits

e value

%identity

Alignment

A4GGE7 Photosystem I iron-sulfur center

8.7e-45

100

Show/hide

Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A4QJG7 Photosystem I iron-sulfur center

5.7e-44

98.77

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A4QJQ1 Photosystem I iron-sulfur center

5.7e-44

98.77

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

P10793 Photosystem I iron-sulfur center

8.7e-45

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

P42046 Photosystem I iron-sulfur center

8.7e-45

100

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Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

Arabidopsis top hits

e value

%identity

Alignment

ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding

4.0e-45

98.77

Show/hide

Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

ATCG01090.1 NADPH dehydrogenases

5.9e-04

27.78

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Query:  YDTCIGCTQCVRACPTDVLEMIPW----GGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAYSWLSATQMPSDI
        +D CI C  CVR CP D L ++ W       K + +  +     C+ C  C   CPT+ LS+       T     L Y+ ++  ++P  +
Subjt:  YDTCIGCTQCVRACPTDVLEMIPW----GGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAYSWLSATQMPSDI

Sequences

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CDS sequence

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ATGTCACATTCAGTAAAGATTTATGATACATGTATAGGGTGTACTCAATGTGTCCGAGCTTGCCCCACAGATGTATTAGAAATGATACCTTGGGGCGGATGTAAAGCTAA
GCAAATAGCTTCGGCTCCAAGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCTGCCTGTCCGACGGATTTCTTGAGTGTTCGCGTTTATTTATGGCATGAAACAA
CTCGAAGCATGGGTCTAGCTTATTCTTGGCTAAGCGCCACTCAAATGCCTAGTGACATAAAGAAGGGCACTTCGAATACCTTTGAGAAATCGGGGCCATACAGCCACTTC
ACCACTTTGAAAAGCCTACTTAGCTTTAGCAGGCGAGCGGAGTCAAGTCAAGCTAACGCTTCCCTATCCCGATGA

mRNA sequence

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Protein sequence

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MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAYSWLSATQMPSDIKKGTSNTFEKSGPYSHF
TTLKSLLSFSRRAESSQANASLSR

Tan0009052 (gene) of Snake gourd v1 genome