CuGenDBv2

Gene ID	Tan0009060
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Fiber protein Fb15
Genome location	LG09:68812985..68815680
RNA-Seq Expression	Tan0009060
Synteny	Tan0009060
Gene Ontology terms	GO:0009299 - mRNA transcription (biological process) GO:0009416 - response to light stimulus (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]

1.9e-40

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKKAV+R LDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_004146334.1 uncharacterized protein LOC101202935 [Cucumis sativus]

1.9e-40

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKKAV+R LDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_022135438.1 uncharacterized protein LOC111007393 [Momordica charantia]

3.2e-40

92.22

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPG+VKPMLSID  KKAV+RGLDNYNAKYIQTGSIDPL HVCFGGM+FSYLVALPEERRHL HQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_022974229.1 uncharacterized protein LOC111472849 [Cucurbita maxima]

8.4e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELPGYVKPMLSID AKKAVQRGLDNYNAKYIQTGSIDPL HVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_038879762.1 uncharacterized protein LOC120071511 [Benincasa hispida]

4.0e-43

97.78

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELP YVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXD4 Uncharacterized protein

9.1e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKKAV+R LDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A1S3BWJ6 uncharacterized protein LOC103494239

1.6e-40

92.22

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKK VQR LDNY+AKYIQT SIDPL+HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A5D3DYB3 Uncharacterized protein

1.6e-40

92.22

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKK VQR LDNY+AKYIQT SIDPL+HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1C4T8 uncharacterized protein LOC111007393

1.6e-40

92.22

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPG+VKPMLSID  KKAV+RGLDNYNAKYIQTGSIDPL HVCFGGM+FSYLVALPEERRHL HQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1IH01 uncharacterized protein LOC111472849

4.1e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELPGYVKPMLSID AKKAVQRGLDNYNAKYIQTGSIDPL HVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30010.1 unknown protein

6.2e-34

68.89

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MA+++ +SEI+G KV ELPGY+K   S+++ K +V+RGLDNYN KYIQT S+DP+ H+CF GM FSYLVALP ERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

Sequences

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CDS sequence

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mRNA sequence

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ATGGCAATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAGGTTAAGGAGCTGCCCGGCTACGTGAAGCCGATGCTCTCCATTGATTCTGCGAAGAAGGCAGTGCAGAG
AGGTCTCGACAATTACAACGCCAAGTATATCCAGACCGGCTCGATTGACCCTCTGTACCATGTCTGCTTTGGAGGTATGATCTTTTCCTACCTCGTTGCTCTCCCTGAGG
AACGGCGCCACCTTGAACATCAGCAACACGCCAAAGAGCATGGTGGCCACTGATTGAGTTCTCCTTCTTTTGAGAATTTAATGGACGGTGTATATGGTACATGTGAGTAT
CAAATGAGGTCTAGCCTTGCAGTTTTGAGTTTGTCTGTATTTACTTTTTCCCTATAAATTAGGACATTTCAGTGCTCTTAATGATTTATTATAGCTGTTGCCTGTTGAAA
GAAACATGTCTTCGGATATGCATAATTACCGTAATAAGAGCCTCACGAAAAATGTTGGTACTCATACTGTACTAGTAAGTCCATTTTATTTCCTTAGAATAAAGTTTTGT
TCTTTCTGTTGCTGTCTTTTTTTTCCTTTCAATACGTTGAGATCAGTTGTCTTTTGTTCCCTGGCCCCTTAGAAGGCCTAGGGGAGAGGCGATAGTAGAGTGATTGAAAG
AGCATGATAAGAAGTATCTAAATGATATTTAAGGGAACGAAATATCCATGTTAGGTGTTCATAGTATCCCTTACCTTGCCAGAATTTAAACCTCCTCTCATTGCATTCTG
TGCAAATAACTGCAGATCATAGATAATCTAATGGAATACGGTTCTGGGCTTGTATTGACCAATCCGCTTACTTTTTAGTTGGGTCTAGTTGACTCAATGCACTGTGACAA
CCTCTTCTGGACTGTAAAACACAAGATATATGTTTTTAGTTTTAGATAGCATAATTGTTTGTGCAGATTTTGAATCTTGCATATAACTTATGCATAGAATTGTATAGTAA
AGTCTCTTTCGATGCTGGAGATTTAGGCTTGCACATATTTCTAAATCTAACTCCTTCCCTTTCTTTATACATTTTCTTTATTTTTGCAGGGTCAATGCGCCTCAAAGGTG

Protein sequence

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MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

Tan0009060 (gene) of Snake gourd v1 genome