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Tan0009062 (gene) of Snake gourd v1 genome

Gene IDTan0009062
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlow-molecular-weight cysteine-rich 12
Genome locationLG11:13486963..13506469
RNA-Seq ExpressionTan0009062
SyntenyTan0009062
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]6.4e-1153.23Show/hide
Query:  LMVPQGANAA-KCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCGK
        ++VPQGA A  +C DKLYD GC   DC  KC EK+ D++ QC+   P    +ACYCFYNCG+
Subjt:  LMVPQGANAA-KCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCGK

KGN52438.1 hypothetical protein Csa_008032 [Cucumis sativus]1.4e-1356.79Show/hide
Query:  MAKFSCSLFFLLVLLFSVA-LTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPG-STSDCVAAPPIPFTFACYCFYNFA
        M++ S S FF++ LL SVA + +P+VA+A  C DKLY VGC+A+ECKQ+C  KYP  S+S C++ PPIPF  AC CFYN A
Subjt:  MAKFSCSLFFLLVLLFSVA-LTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPG-STSDCVAAPPIPFTFACYCFYNFA

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]9.1e-1858.97Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFA
        MAKFSCSLFF+   L S A  +P    A KC  KLY GCL ++C QKC +KYP S+S+CVA PPIPF ++CYCFY+ A
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFA

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]3.5e-0948.33Show/hide
Query:  LMVPQGANAAKCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCG
        + +PQGA AA+C D LY+ GC   DC  KC EK+ +++ QC+   P    +ACYCFY CG
Subjt:  LMVPQGANAAKCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCG

XP_025015224.1 putative defensin-like protein 165 [Ricinus communis]6.6e-1633.33Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFALMVPQGANAAKCSDKLYDVGC
        MA  S + F ++ L  + A  VP      +C ++LY  GC  E+CK+KC +++      C+    +   +ACYCF+N A +VP+     +C ++LY  GC
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFALMVPQGANAAKCSDKLYDVGC

Query:  LPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNC
          +DC+ KC +++ D    C+    I   + CYCF+NC
Subjt:  LPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNC

TrEMBL top hitse value%identityAlignment
A0A0A0KS76 Uncharacterized protein6.6e-1456.79Show/hide
Query:  MAKFSCSLFFLLVLLFSVA-LTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPG-STSDCVAAPPIPFTFACYCFYNFA
        M++ S S FF++ LL SVA + +P+VA+A  C DKLY VGC+A+ECKQ+C  KYP  S+S C++ PPIPF  AC CFYN A
Subjt:  MAKFSCSLFFLLVLLFSVA-LTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPG-STSDCVAAPPIPFTFACYCFYNFA

A0A0A0KU45 Uncharacterized protein4.4e-1858.97Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFA
        MAKFSCSLFF+   L S A  +P    A KC  KLY GCL ++C QKC +KYP S+S+CVA PPIPF ++CYCFY+ A
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFA

A0A0A0LVZ5 Uncharacterized protein1.7e-0948.33Show/hide
Query:  LMVPQGANAAKCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCG
        + +PQGA AA+C D LY+ GC   DC  KC EK+ +++ QC+   P    +ACYCFY CG
Subjt:  LMVPQGANAAKCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCG

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat3.1e-1153.23Show/hide
Query:  LMVPQGANAA-KCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCGK
        ++VPQGA A  +C DKLYD GC   DC  KC EK+ D++ QC+   P    +ACYCFYNCG+
Subjt:  LMVPQGANAA-KCSDKLYDVGCLPQDCQLKCLEKYSDSTFQCVAATPIPLTFACYCFYNCGK

A0A6J1EAA9 putative defensin-like protein 1291.4e-0849.35Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        MAKF C L FLL++L SVAL +P  A A+ C ++LY  GC A  C+++C EKY  ST +CV  P  P   AC CF++
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLY-VGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN

SwissProt top hitse value%identityAlignment
P82727 Putative defensin-like protein 1657.1e-0536.11Show/hide
Query:  SLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        S F LLV+LFSV   +P+     +C  +L  G  C+  +C++ C ++  G  S C+  PP    + C CFYN
Subjt:  SLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN

Q9M0F3 Putative defensin-like protein 1574.6e-0438.46Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        MAK SCS FF+L+L+FSV   V +     +CT  ++ G  C   +C Q C  +Y G    C+A+ P   +  C C YN
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN

Arabidopsis top hitse value%identityAlignment
AT4G29280.1 low-molecular-weight cysteine-rich 223.3e-0538.46Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        MAK SCS FF+L+L+FSV   V +     +CT  ++ G  C   +C Q C  +Y G    C+A+ P   +  C C YN
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN

AT4G29290.1 low-molecular-weight cysteine-rich 262.1e-0435.9Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        MAK SCS FF+L+L+FS AL +    +  +C   +  G  C   +C+  C   Y G    C   P +P    C C YN
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN

AT4G29305.1 low-molecular-weight cysteine-rich 253.6e-0435.9Show/hide
Query:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKC--TDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        MAK SCS F +L+L+FS  L V R A+  +C  T      C   +C+  C   Y G    C   P +     C C YN
Subjt:  MAKFSCSLFFLLVLLFSVALTVPRVADAAKC--TDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN

AT5G48905.1 low-molecular-weight cysteine-rich 125.0e-0636.11Show/hide
Query:  SLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN
        S F LLV+LFSV   +P+     +C  +L  G  C+  +C++ C ++  G  S C+  PP    + C CFYN
Subjt:  SLFFLLVLLFSVALTVPRVADAAKCTDKLYVG--CLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGTTTTCTTGCTCCCTATTTTTCCTCCTTGTTCTCCTTTTCTCAGTTGCATTGACGGTACCTCGAGTCGCGGATGCAGCAAAATGTACGGACAAATTGTATGT
AGGATGCCTAGCTGAAGAATGTAAGCAAAAGTGTCTAGAGAAGTATCCTGGTTCAACATCTGACTGTGTAGCAGCCCCTCCAATTCCTTTTACCTTTGCTTGCTATTGCT
TCTACAATTTTGCGTTGATGGTACCTCAAGGTGCGAATGCAGCAAAATGTTCGGACAAGTTGTATGATGTAGGATGCTTACCTCAAGACTGTCAACTAAAGTGTCTAGAG
AAGTATTCTGATTCAACATTTCAATGCGTAGCAGCCACTCCAATTCCTTTGACCTTTGCTTGCTATTGCTTCTACAATTGTGGTAAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGTTTTCTTGCTCCCTATTTTTCCTCCTTGTTCTCCTTTTCTCAGTTGCATTGACGGTACCTCGAGTCGCGGATGCAGCAAAATGTACGGACAAATTGTATGT
AGGATGCCTAGCTGAAGAATGTAAGCAAAAGTGTCTAGAGAAGTATCCTGGTTCAACATCTGACTGTGTAGCAGCCCCTCCAATTCCTTTTACCTTTGCTTGCTATTGCT
TCTACAATTTTGCGTTGATGGTACCTCAAGGTGCGAATGCAGCAAAATGTTCGGACAAGTTGTATGATGTAGGATGCTTACCTCAAGACTGTCAACTAAAGTGTCTAGAG
AAGTATTCTGATTCAACATTTCAATGCGTAGCAGCCACTCCAATTCCTTTGACCTTTGCTTGCTATTGCTTCTACAATTGTGGTAAAATCTAA
Protein sequenceShow/hide protein sequence
MAKFSCSLFFLLVLLFSVALTVPRVADAAKCTDKLYVGCLAEECKQKCLEKYPGSTSDCVAAPPIPFTFACYCFYNFALMVPQGANAAKCSDKLYDVGCLPQDCQLKCLE
KYSDSTFQCVAATPIPLTFACYCFYNCGKI