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Tan0009071 (gene) of Snake gourd v1 genome

Gene IDTan0009071
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein
Genome locationLG06:73766644..73768258
RNA-Seq ExpressionTan0009071
SyntenyTan0009071
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060880.1 B3 domain-containing protein [Cucumis melo var. makuwa]8.1e-1584.21Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL
        M+ALNLP+LSQA+LD SPSKSS SKQ+KPRV QKQLVVVRRSSRVAKQP PVYAE L
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL

XP_008444633.1 PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis melo]7.6e-1381.82Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE
        M+ALNLP+LSQA++D SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE

XP_022144182.1 B3 domain-containing protein At5g42700-like [Momordica charantia]3.4e-1382.46Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL
        M+ALNLP+LSQA+LD SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE L
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL

XP_022144315.1 B3 domain-containing protein At5g42700-like [Momordica charantia]7.6e-1382.46Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL
        M+ALNLP+LSQA+LD SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE L
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL

XP_038885690.1 B3 domain-containing protein At5g42700-like [Benincasa hispida]7.6e-1381.82Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE
        M+ALNLP+LSQA++D SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE

TrEMBL top hitse value%identityAlignment
A0A0A0LNH0 TF-B3 domain-containing protein8.2e-1380Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE
        M+ALNLP+LSQA++D SPSKSS SK  KPRV QK+LVVVRRSSRVAKQ APVYAE
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE

A0A1S3BAR2 B3 domain-containing protein At5g42700-like3.7e-1381.82Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE
        M+ALNLP+LSQA++D SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAE

A0A5A7V0M6 B3 domain-containing protein3.9e-1584.21Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL
        M+ALNLP+LSQA+LD SPSKSS SKQ+KPRV QKQLVVVRRSSRVAKQP PVYAE L
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL

A0A6J1CRA6 B3 domain-containing protein At5g42700-like3.7e-1382.46Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL
        M+ALNLP+LSQA+LD SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE L
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL

A0A6J1CSY5 B3 domain-containing protein At5g42700-like1.7e-1382.46Show/hide
Query:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL
        M+ALNLP+LSQA+LD SPSKSS SK  KPRV QKQLVVVRRSSRVAKQ APVYAE L
Subjt:  MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCCTAAATTTGCCCGTGCTTTCTCAAGCGATCCTCGATTATTCTCCTTCCAAATCCTCCCATAGTAAACAGATCAAGCCTCGTGTGGCGCAGAAACAACTGGT
GGTGGTGAGGAGGTCCAGTCGCGTAGCAAAACAACCAGCGCCTGTTTACGCTGAAGATTTAGATGAAGACGGCGATGACCATCTTCATACTCCTTTCTTTCTTTTGGACC
TTTTTACAACATGGGTCTTTTTGCAATTGAATAATGGAAGTTCAGTTGATTCACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCCTAAATTTGCCCGTGCTTTCTCAAGCGATCCTCGATTATTCTCCTTCCAAATCCTCCCATAGTAAACAGATCAAGCCTCGTGTGGCGCAGAAACAACTGGT
GGTGGTGAGGAGGTCCAGTCGCGTAGCAAAACAACCAGCGCCTGTTTACGCTGAAGATTTAGATGAAGACGGCGATGACCATCTTCATACTCCTTTCTTTCTTTTGGACC
TTTTTACAACATGGGTCTTTTTGCAATTGAATAATGGAAGTTCAGTTGATTCACCTTAG
Protein sequenceShow/hide protein sequence
MKALNLPVLSQAILDYSPSKSSHSKQIKPRVAQKQLVVVRRSSRVAKQPAPVYAEDLDEDGDDHLHTPFFLLDLFTTWVFLQLNNGSSVDSP