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Tan0009077 (gene) of Snake gourd v1 genome

Gene IDTan0009077
OrganismTrichosanthes anguina (Snake gourd v1)
Description39S ribosomal protein L41-A, mitochondrial-like
Genome locationLG01:102977115..102980962
RNA-Seq ExpressionTan0009077
SyntenyTan0009077
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608261.1 39S ribosomal protein L41-A, mitochondrial-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4094.68Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEA  TS+A ESTKS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]5.7e-4092.55Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGLGR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP E  KTS+ASES KS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

XP_022940505.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita moschata]7.5e-4094.68Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQC IE AKTS+A ESTKS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]6.7e-4195.74Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE AKTS+A ESTKS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]4.4e-4093.62Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGLGR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE  KTSD +ES KS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein1.8e-3992.55Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE  KTSD +ES KS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like6.8e-3991.49Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE   TSD +ES KS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial2.8e-4092.55Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGLGR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP E  KTS+ASES KS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

A0A6J1FQT8 39S ribosomal protein L41-A, mitochondrial-like3.6e-4094.68Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQC IE AKTS+A ESTKS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like3.3e-4195.74Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE AKTS+A ESTKS
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial4.6e-0851.92Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6DJI4 39S ribosomal protein L41-A, mitochondrial2.1e-0844.59Show/hide
Query:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial3.5e-0844.59Show/hide
Query:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial2.3e-0747.62Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKT
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FKLKPYVS    E+ +T
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKT

Q9CQN7 39S ribosomal protein L41, mitochondrial4.6e-0850Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L272.0e-3574.19Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTK
        M LGL+ G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDLT FKLKPYVSQCP++  KT++++E++K
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTK

AT5G39800.1 Mitochondrial ribosomal protein L271.8e-3677.78Show/hide
Query:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTK
        GL++G+GRS RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCPI+   T++++E++K
Subjt:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTK

AT5G40080.1 Mitochondrial ribosomal protein L274.1e-3676.67Show/hide
Query:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTK
        GL++G+GRS RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCP++   T++++E++K
Subjt:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGACTGATATTGGGACTCGGAAGATCAATGCGGAGGAAACGGACATCATCTCTGGATATTCTTTCGTCGAAACGAGCTCCACGAGATTACTACAAGGGCAA
GAATTGCAAGCCTACTGGTTTTCATACGCGCAAAGGTGGATACGTAGTAGTGCCAGAGAAACTGCCTAACTATGTTGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTT
ATGTATCTCAATGTCCAATAGAAGCTGCTAAGACCAGTGACGCCAGTGAATCAACTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
AGATTGAATACGAGGGAACCGAGTAGCCGAAGAAATTTCAGGTTTCTCGTATTGTTCTTTCCTCTTCGAATTCTTCAGAGTGGAAATGGCGTTGGGACTGATATTGGGAC
TCGGAAGATCAATGCGGAGGAAACGGACATCATCTCTGGATATTCTTTCGTCGAAACGAGCTCCACGAGATTACTACAAGGGCAAGAATTGCAAGCCTACTGGTTTTCAT
ACGCGCAAAGGTGGATACGTAGTAGTGCCAGAGAAACTGCCTAACTATGTTGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCAATAGAAGC
TGCTAAGACCAGTGACGCCAGTGAATCAACTAAATCATAAGCGATGAGGCTTCCGAATTCTCTATGCCATGAAATCAACTCCATGTGTGCTAACTTTTGGTATGGATCGT
CAAGGAACTATCAGAAAATACACGGGAGAACTTAGATGCAAATGCGCATAATTAAGGAGTTTGGGGGATGGACTTTCG
Protein sequenceShow/hide protein sequence
MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEAAKTSDASESTKS