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Tan0009080 (gene) of Snake gourd v1 genome

Gene IDTan0009080
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:72668359..72669613
RNA-Seq ExpressionTan0009080
SyntenyTan0009080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN48603.1 hypothetical protein Csa_002719 [Cucumis sativus]8.3e-3756.67Show/hide
Query:  SSSQKTHFHFHFHFNFAFPILGFEGCVRERKKEKRNILRLAFCVCVAVVAVKHEAQLIFLMGC-LCLPPSLSFSVSLSSTLAFLSFPFP-FFSFFIFLLL
        SSSQK HF F       FP+    GC   R+++K NILRLAFCVCVAVVAVKHEAQLI LMG  L LP  L F+V LS    +    FP  FSFF     
Subjt:  SSSQKTHFHFHFHFNFAFPILGFEGCVRERKKEKRNILRLAFCVCVAVVAVKHEAQLIFLMGC-LCLPPSLSFSVSLSSTLAFLSFPFP-FFSFFIFLLL

Query:  YSSVFLYSFLFTYGLFSGVELSN---------QVDSGQGILNCEILWIGKDFWFLTRCKGKERKGNRRWCQVLASGGVSSFANYIRFKSVFIVMPHPFDL
               S LF     SGVELSN         + DSG GIL+ E L IG+DFW LT  KGK++        VLASGGVSSFANYIRFKSVFIVM HPFD 
Subjt:  YSSVFLYSFLFTYGLFSGVELSN---------QVDSGQGILNCEILWIGKDFWFLTRCKGKERKGNRRWCQVLASGGVSSFANYIRFKSVFIVMPHPFDL

Query:  LSPGSLGSVT
        LSPGSLGSVT
Subjt:  LSPGSLGSVT
TrEMBL top hitse value%identityAlignment
A0A0A0KGH3 Uncharacterized protein4.0e-3756.67Show/hide
Query:  SSSQKTHFHFHFHFNFAFPILGFEGCVRERKKEKRNILRLAFCVCVAVVAVKHEAQLIFLMGC-LCLPPSLSFSVSLSSTLAFLSFPFP-FFSFFIFLLL
        SSSQK HF F       FP+    GC   R+++K NILRLAFCVCVAVVAVKHEAQLI LMG  L LP  L F+V LS    +    FP  FSFF     
Subjt:  SSSQKTHFHFHFHFNFAFPILGFEGCVRERKKEKRNILRLAFCVCVAVVAVKHEAQLIFLMGC-LCLPPSLSFSVSLSSTLAFLSFPFP-FFSFFIFLLL

Query:  YSSVFLYSFLFTYGLFSGVELSN---------QVDSGQGILNCEILWIGKDFWFLTRCKGKERKGNRRWCQVLASGGVSSFANYIRFKSVFIVMPHPFDL
               S LF     SGVELSN         + DSG GIL+ E L IG+DFW LT  KGK++        VLASGGVSSFANYIRFKSVFIVM HPFD 
Subjt:  YSSVFLYSFLFTYGLFSGVELSN---------QVDSGQGILNCEILWIGKDFWFLTRCKGKERKGNRRWCQVLASGGVSSFANYIRFKSVFIVMPHPFDL

Query:  LSPGSLGSVT
        LSPGSLGSVT
Subjt:  LSPGSLGSVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCAGATCAGCGTGCTATTTTTATTCTTCAAAAGCTAACCCAGTGGGGGCCTCAATTCGTCTCTTCTCTTCTTCTCAAAAAACCCATTTCCATTTCCATTTCCA
TTTCAATTTCGCTTTCCCAATTCTGGGTTTTGAGGGCTGCGTGCGAGAGAGAAAGAAAGAAAAAAGGAACATTCTGAGGTTGGCCTTTTGTGTTTGTGTAGCTGTGGTGG
CTGTCAAACATGAGGCACAGCTCATTTTTTTGATGGGTTGCCTTTGTCTGCCCCCCTCCCTTTCCTTTTCGGTTTCACTTTCTAGTACTCTTGCATTTCTCTCTTTCCCT
TTTCCTTTTTTCTCATTTTTTATCTTCTTACTGTTGTATTCTTCCGTTTTTCTCTATTCTTTTCTTTTTACTTACGGGCTCTTTTCAGGTGTTGAGCTTTCAAATCAAGT
AGACAGTGGACAAGGAATTTTGAATTGTGAGATTCTGTGGATTGGGAAGGATTTTTGGTTTTTGACCCGTTGCAAAGGAAAGGAAAGGAAAGGGAATAGACGGTGGTGTC
AGGTATTAGCAAGTGGGGGTGTCTCCAGCTTTGCGAATTACATACGTTTTAAGAGTGTTTTCATAGTAATGCCACACCCATTCGACCTTCTATCCCCGGGGTCCTTGGGA
AGTGTTACTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCAGATCAGCGTGCTATTTTTATTCTTCAAAAGCTAACCCAGTGGGGGCCTCAATTCGTCTCTTCTCTTCTTCTCAAAAAACCCATTTCCATTTCCATTTCCA
TTTCAATTTCGCTTTCCCAATTCTGGGTTTTGAGGGCTGCGTGCGAGAGAGAAAGAAAGAAAAAAGGAACATTCTGAGGTTGGCCTTTTGTGTTTGTGTAGCTGTGGTGG
CTGTCAAACATGAGGCACAGCTCATTTTTTTGATGGGTTGCCTTTGTCTGCCCCCCTCCCTTTCCTTTTCGGTTTCACTTTCTAGTACTCTTGCATTTCTCTCTTTCCCT
TTTCCTTTTTTCTCATTTTTTATCTTCTTACTGTTGTATTCTTCCGTTTTTCTCTATTCTTTTCTTTTTACTTACGGGCTCTTTTCAGGTGTTGAGCTTTCAAATCAAGT
AGACAGTGGACAAGGAATTTTGAATTGTGAGATTCTGTGGATTGGGAAGGATTTTTGGTTTTTGACCCGTTGCAAAGGAAAGGAAAGGAAAGGGAATAGACGGTGGTGTC
AGGTATTAGCAAGTGGGGGTGTCTCCAGCTTTGCGAATTACATACGTTTTAAGAGTGTTTTCATAGTAATGCCACACCCATTCGACCTTCTATCCCCGGGGTCCTTGGGA
AGTGTTACTCATTGA
Protein sequenceShow/hide protein sequence
MAVRSACYFYSSKANPVGASIRLFSSSQKTHFHFHFHFNFAFPILGFEGCVRERKKEKRNILRLAFCVCVAVVAVKHEAQLIFLMGCLCLPPSLSFSVSLSSTLAFLSFP
FPFFSFFIFLLLYSSVFLYSFLFTYGLFSGVELSNQVDSGQGILNCEILWIGKDFWFLTRCKGKERKGNRRWCQVLASGGVSSFANYIRFKSVFIVMPHPFDLLSPGSLG
SVTH