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Tan0009110 (gene) of Snake gourd v1 genome

Gene IDTan0009110
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RNF126-like
Genome locationLG01:97685749..97686279
RNA-Seq ExpressionTan0009110
SyntenyTan0009110
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605228.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]5.1e-5063.64Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQF+ELRLGHSSHLISRSS QILQ+SPSTP+  +LFP  LRDLE PPFL +++V+HFL+SF++PIA  D I+++I+ FA  LAA N+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SP   NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

XP_022947933.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita moschata]7.4e-4963.03Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQ LELRLG+S+HLISRSS QILQ++P+TP+  ALFP  LRDL+ PPFLS+ YV+ FL+SF++PIA  D I+E+I+ FA  LAAGN+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SPA  NGAPASAIERL+ Q+FDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

XP_023006824.1 RING-H2 finger protein ATL16-like [Cucurbita maxima]1.1e-4962.42Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQF+ELRLGHSSHLISRSS QILQ+SPSTP+  +LFP  LRDLE PPFL +++V+HFL+SF++P+A  D I+++I+ FA  L A N+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SP   NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

XP_023006826.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita maxima]1.1e-4964.24Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        +Q LELRLGHS+HLISRSS QILQ++PSTPI  ALFP  LRDL+ PPFLS+ YV+ FL+SF++PIA  D I+E+I+ FA  LAAGN+D NFHI V +D  
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SPA  NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

XP_023533113.1 RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo]6.0e-5166.06Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQF+ELRLGHSSHLISRSS QILQ++PSTP+  ALFP  LRDL DPPFLS  +V+ FL+SF +PIAV + IF +I+ FA HLAAGN+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SPA  NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

TrEMBL top hitse value%identityAlignment
A0A6J1ES83 uncharacterized protein LOC1114355041.2e-4155.17Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQ+ ELRL +S+  +SRSS+Q+LQ++P T I+ AL PL LRDL+ PPFLSHF V+ FL++FN+  A S AIF+ IA FA  LAAG+LDRNFHI V +D +
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDPE---DSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPVVTCIINHVF
        Q +WVDLD +   + P     APAS +ERL  ++FDGF  EE   DCSVCCDEL  E EV R+P       HVF
Subjt:  QNLWVDLDPE---DSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPVVTCIINHVF

A0A6J1G7Z5 E3 ubiquitin-protein ligase RNF126-like3.6e-4963.03Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQ LELRLG+S+HLISRSS QILQ++P+TP+  ALFP  LRDL+ PPFLS+ YV+ FL+SF++PIA  D I+E+I+ FA  LAAGN+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SPA  NGAPASAIERL+ Q+FDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

A0A6J1G809 probable E3 ubiquitin-protein ligase RHA4A1.0e-4864.24Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQF+ELRLGHSSHLISRSS QILQ++PSTP+  ALFP  LRDL  PPFLS  +V+ FL+SF++PIAV + IF +I+ FA HLAAGN+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SP   NGAPASAIERL+ Q+FDG   EE G +CSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

A0A6J1KYV1 E3 ubiquitin-protein ligase RNF126-like5.5e-5064.24Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        +Q LELRLGHS+HLISRSS QILQ++PSTPI  ALFP  LRDL+ PPFLS+ YV+ FL+SF++PIA  D I+E+I+ FA  LAAGN+D NFHI V +D  
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SPA  NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

A0A6J1L387 RING-H2 finger protein ATL16-like5.5e-5062.42Show/hide
Query:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI
        MQF+ELRLGHSSHLISRSS QILQ+SPSTP+  +LFP  LRDLE PPFL +++V+HFL+SF++P+A  D I+++I+ FA  L A N+D NFHI V +D I
Subjt:  MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFI

Query:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP
        + +WVDLDP    E SP   NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIP
Subjt:  QNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTTCTGGAACTCCGATTGGGGCATTCGAGCCATCTAATCTCACGATCTTCTCACCAAATTCTCCAACGAAGTCCCTCAACTCCAATCGCTACTGCTCTGTTTCC
TTTGTCTCTGCGCGACCTTGAAGACCCACCGTTTCTCTCCCACTTCTACGTCATTCATTTTCTAACTTCCTTTAACCTCCCCATCGCCGTTTCTGATGCAATCTTTGAGA
AGATCGCCTTCTTCGCCCACCACTTGGCTGCCGGAAACCTCGATCGGAACTTCCACATCAACGTCGCTATCGATTTCATTCAAAATCTATGGGTGGACCTGGACCCAGAA
GATTCTCCGGCAGTGACGAATGGGGCGCCCGCGTCGGCCATTGAGAGACTGAAGAACCAGAAATTCGATGGGTTTGGACTCGAAGAAGTGGGAGATGATTGCAGTGTTTG
TTGCGATGAACTTAACGCTGAAAAGGAGGTGACAAGAATCCCTGTGGTCACGTGTATCATAAATCATGTATTCTCACTTGGCTTCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTTCTGGAACTCCGATTGGGGCATTCGAGCCATCTAATCTCACGATCTTCTCACCAAATTCTCCAACGAAGTCCCTCAACTCCAATCGCTACTGCTCTGTTTCC
TTTGTCTCTGCGCGACCTTGAAGACCCACCGTTTCTCTCCCACTTCTACGTCATTCATTTTCTAACTTCCTTTAACCTCCCCATCGCCGTTTCTGATGCAATCTTTGAGA
AGATCGCCTTCTTCGCCCACCACTTGGCTGCCGGAAACCTCGATCGGAACTTCCACATCAACGTCGCTATCGATTTCATTCAAAATCTATGGGTGGACCTGGACCCAGAA
GATTCTCCGGCAGTGACGAATGGGGCGCCCGCGTCGGCCATTGAGAGACTGAAGAACCAGAAATTCGATGGGTTTGGACTCGAAGAAGTGGGAGATGATTGCAGTGTTTG
TTGCGATGAACTTAACGCTGAAAAGGAGGTGACAAGAATCCCTGTGGTCACGTGTATCATAAATCATGTATTCTCACTTGGCTTCAGATGA
Protein sequenceShow/hide protein sequence
MQFLELRLGHSSHLISRSSHQILQRSPSTPIATALFPLSLRDLEDPPFLSHFYVIHFLTSFNLPIAVSDAIFEKIAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDPE
DSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPVVTCIINHVFSLGFR