; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009136 (gene) of Snake gourd v1 genome

Gene IDTan0009136
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptiontRNA-specific 2-thiouridylase
Genome locationLG08:7370838..7371164
RNA-Seq ExpressionTan0009136
SyntenyTan0009136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB57573.1 hypothetical protein L484_022680 [Morus notabilis]2.4e-1049.54Show/hide
Query:  MSCMEIAGVR-GCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRI----REIVNRMKIEDVCPNIIFSTQWGL
        M   +I GVR  CR   YE+L N   +V K  R W+KK   + +KG RL R  K   L LKV  +++ + RI     EIVNRM I+ V PNIIF+TQWGL
Subjt:  MSCMEIAGVR-GCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRI----REIVNRMKIEDVCPNIIFSTQWGL

Query:  PVLSYSSSK
        PVLS+SS K
Subjt:  PVLSYSSSK

KAA0056096.1 hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa]3.7e-2770.64Show/hide
Query:  MSCMEIAGVRGCRWH-QYEKLYNGG---NRVV---KRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFST
        M  +EIAG+ G RW   YEKL + G   NRVV    RRRRW+KK+LKRGMKGFRLYR T+L  +  LKVSFL+ LSRRIREIVNRMK +EDVCPNIIFST
Subjt:  MSCMEIAGVRGCRWH-QYEKLYNGG---NRVV---KRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFST

Query:  QWGLPVLSY
        QWGLPVLSY
Subjt:  QWGLPVLSY

KAF3454760.1 hypothetical protein FNV43_RR05208 [Rhamnella rubrinervis]6.4e-1150Show/hide
Query:  EIAGVRGCRWHQYEKLYNG--GNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRI----REIVNRMKIEDVCPNIIFSTQWGLPVL
        EI G  G   H+YEKL +     +  +    W+KK+  R +KG RL RP K   L LKV  +++LS RI     E+VNRMKI+ VCPNI FSTQWGLPVL
Subjt:  EIAGVRGCRWHQYEKLYNG--GNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRI----REIVNRMKIEDVCPNIIFSTQWGLPVL

Query:  SYSSSK
        S+ S K
Subjt:  SYSSSK

KAG6599155.1 Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3169.16Show/hide
Query:  MSCMEIAGVRGCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLSY
        M  +E AG+ G RW+QYEKL+   N VVK RRRWMKK LKRG KGFRLYR T+  +  LKVSFL+L+SRRIREIVNRMK+EDVC N+IF TQWGLP LSY
Subjt:  MSCMEIAGVRGCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLSY

Query:  SSSKYLL
        +SS  LL
Subjt:  SSSKYLL

KGN61039.1 hypothetical protein Csa_021124 [Cucumis sativus]2.6e-2872.38Show/hide
Query:  MSCMEIAGVRGCRWH-QYEKLYNGGNR--VVKRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFSTQWGL
        MS +EIAG+ G RW   YEKL +GG+   VV RRRRW+KK+LKRGMKGFRLYR T+L  +  LKVSFL+ LSRRIREIV+RMK +EDVCPNIIFSTQWGL
Subjt:  MSCMEIAGVRGCRWH-QYEKLYNGGNR--VVKRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFSTQWGL

Query:  PVLSY
        PVLSY
Subjt:  PVLSY

TrEMBL top hitse value%identityAlignment
A0A0A0LJ29 Uncharacterized protein1.3e-2872.38Show/hide
Query:  MSCMEIAGVRGCRWH-QYEKLYNGGNR--VVKRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFSTQWGL
        MS +EIAG+ G RW   YEKL +GG+   VV RRRRW+KK+LKRGMKGFRLYR T+L  +  LKVSFL+ LSRRIREIV+RMK +EDVCPNIIFSTQWGL
Subjt:  MSCMEIAGVRGCRWH-QYEKLYNGGNR--VVKRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFSTQWGL

Query:  PVLSY
        PVLSY
Subjt:  PVLSY

A0A2C9VF51 Uncharacterized protein2.9e-0950Show/hide
Query:  HQYEKLYNGGNRVVK-RRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFL-ILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLSYSSSK
        ++YEKL +   ++ K RRR W+KK L  G+KG RL R  KL    L V  L   ++R   +I++R+KIED+ PNIIFSTQ GLPVLS+ S K
Subjt:  HQYEKLYNGGNRVVK-RRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFL-ILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLSYSSSK

A0A5D3BCS3 Uncharacterized protein1.8e-2770.64Show/hide
Query:  MSCMEIAGVRGCRWH-QYEKLYNGG---NRVV---KRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFST
        M  +EIAG+ G RW   YEKL + G   NRVV    RRRRW+KK+LKRGMKGFRLYR T+L  +  LKVSFL+ LSRRIREIVNRMK +EDVCPNIIFST
Subjt:  MSCMEIAGVRGCRWH-QYEKLYNGG---NRVV---KRRRRWMKKILKRGMKGFRLYRPTKL-PTLNLKVSFLILLSRRIREIVNRMK-IEDVCPNIIFST

Query:  QWGLPVLSY
        QWGLPVLSY
Subjt:  QWGLPVLSY

A0A6A1UJJ6 Uncharacterized protein1.7e-0943.69Show/hide
Query:  MSCMEIAGVRGCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFL-ILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLS
        M   ++ G R  +W +Y+KL N   +V + RRRW++K+  R +KG RL RP KL      +  L I ++R   +I NRM  + VCP IIF  QWGLPVLS
Subjt:  MSCMEIAGVRGCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFL-ILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLS

Query:  YSS
        ++S
Subjt:  YSS

W9R5R9 Uncharacterized protein1.2e-1049.54Show/hide
Query:  MSCMEIAGVR-GCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRI----REIVNRMKIEDVCPNIIFSTQWGL
        M   +I GVR  CR   YE+L N   +V K  R W+KK   + +KG RL R  K   L LKV  +++ + RI     EIVNRM I+ V PNIIF+TQWGL
Subjt:  MSCMEIAGVR-GCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRI----REIVNRMKIEDVCPNIIFSTQWGL

Query:  PVLSYSSSK
        PVLS+SS K
Subjt:  PVLSYSSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTATGGAGATTGCTGGCGTTAGAGGATGTCGGTGGCATCAATATGAGAAGCTATACAATGGTGGTAATAGAGTGGTCAAGCGTAGACGTCGATGGATGAAGAA
AATATTGAAGAGAGGAATGAAAGGTTTTCGGTTGTATCGTCCTACAAAATTACCTACACTTAATTTGAAGGTATCCTTTTTAATCTTGTTGTCGAGAAGAATTAGAGAGA
TTGTTAATAGAATGAAGATTGAAGATGTATGTCCTAATATCATCTTCTCCACTCAATGGGGACTTCCTGTTTTATCTTATTCATCTTCCAAGTATTTGTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTATGGAGATTGCTGGCGTTAGAGGATGTCGGTGGCATCAATATGAGAAGCTATACAATGGTGGTAATAGAGTGGTCAAGCGTAGACGTCGATGGATGAAGAA
AATATTGAAGAGAGGAATGAAAGGTTTTCGGTTGTATCGTCCTACAAAATTACCTACACTTAATTTGAAGGTATCCTTTTTAATCTTGTTGTCGAGAAGAATTAGAGAGA
TTGTTAATAGAATGAAGATTGAAGATGTATGTCCTAATATCATCTTCTCCACTCAATGGGGACTTCCTGTTTTATCTTATTCATCTTCCAAGTATTTGTTGCCTTGA
Protein sequenceShow/hide protein sequence
MSCMEIAGVRGCRWHQYEKLYNGGNRVVKRRRRWMKKILKRGMKGFRLYRPTKLPTLNLKVSFLILLSRRIREIVNRMKIEDVCPNIIFSTQWGLPVLSYSSSKYLLP