; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009151 (gene) of Snake gourd v1 genome

Gene IDTan0009151
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionhomeobox protein knotted-1-like 1
Genome locationLG10:130879..132596
RNA-Seq ExpressionTan0009151
SyntenyTan0009151
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005540 - KNOX1
IPR005541 - KNOX2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596993.1 Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4774.15Show/hide
Query:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA
        M+S N+  ++    +L++   EE+ G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIGE LDRGYLA DL+E ++N+IRCLNTLNQSELDRFME+YC+A
Subjt:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA

Query:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA
        LSKLKEAMEESQLKSMAFINSM+SQLRELT TGAAAKKPT +SSS A
Subjt:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA

KAG7028461.1 Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]6.7e-4874.83Show/hide
Query:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA
        M+S N+  ++    +L++   EE+ G +GE+LRRRISSHPLYGLL+ETHLNCLKVGGIGE LDRGYLA DL+E ++N+IRCLNTLNQSELDRFME+YC+A
Subjt:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA

Query:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA
        LSKLKEAMEESQLKSMAFINSM+SQLRELT TGAAAKKPT +SSS A
Subjt:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA

XP_022137557.1 protein KNATM [Momordica charantia]1.3e-5180.14Show/hide
Query:  MESE-NNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALS
        MES+ +N  E  Q+   + EE+ G EGEILRRRISSHPLYGLLVETHLNCLKVGGIG+ +DRGYLATD+I+QQDN IRCLNTLNQSELDRFMETYCFALS
Subjt:  MESE-NNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALS

Query:  KLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDAN
        KLKEAMEESQ+KSMAFINSMHSQLRE+  T AAA KPTTSSSSD N
Subjt:  KLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDAN

XP_022945492.1 homeobox protein KNOX3 [Cucurbita moschata]2.6e-4774.15Show/hide
Query:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA
        M+S N+  ++    +L++   EE+ G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIGE LDRGYLA DL+E ++N+IRCLNTLNQSELDRFME+YC+A
Subjt:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA

Query:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA
        LSKLKEAMEESQLKSMAFINSM+SQLRELT TGAAAKKPT +SSS A
Subjt:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA

XP_038896017.1 homeobox protein knotted-1-like 2 [Benincasa hispida]5.2e-4876.97Show/hide
Query:  MESENNCNEERQEHEL-----EVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYC
        MESEN C EERQE EL     E EEE G EGE+LR +IS+HPLY LLVETHLNCLKVGGI         ATDLI+QQDNKIRC N LNQSELDRFMETYC
Subjt:  MESENNCNEERQEHEL-----EVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYC

Query:  FALSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAA--AKKPTTSSSSDAN
        FALSKLKEAMEESQLKSMAFINSMH QLR+LT TGAA  AKKPTTSSS+D N
Subjt:  FALSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAA--AKKPTTSSSSDAN

TrEMBL top hitse value%identityAlignment
A0A1J7GST9 Uncharacterized protein7.8e-2657.14Show/hide
Query:  SENNCNEERQEHELEVEEEAGRE-GEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKL
        +E N   + ++ ELE E+E  +E  EIL+RRISSHPLYGLLVETHL CLKVG I  L     L  D  E Q  K + L   +Q+ELD FME YC AL +L
Subjt:  SENNCNEERQEHELEVEEEAGRE-GEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKL

Query:  KEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSS
        KEA+EE Q KSMAFIN+MHSQLRELT+    A    TSSS
Subjt:  KEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSS

A0A4P1RQY4 Uncharacterized protein2.3e-2558.39Show/hide
Query:  NEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEE
        +E+ +E ELE EEE+    EIL+RRISSHPLYGLLVETHL CLKVG I  L     +     + Q  K + L   +QSELD FME YC ALS+LKEAMEE
Subjt:  NEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEE

Query:  SQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA
         Q KSM FIN+MHSQLRELT+    A  PT S   DA
Subjt:  SQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA

A0A6J1C8K6 protein KNATM6.3e-5280.14Show/hide
Query:  MESE-NNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALS
        MES+ +N  E  Q+   + EE+ G EGEILRRRISSHPLYGLLVETHLNCLKVGGIG+ +DRGYLATD+I+QQDN IRCLNTLNQSELDRFMETYCFALS
Subjt:  MESE-NNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALS

Query:  KLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDAN
        KLKEAMEESQ+KSMAFINSMHSQLRE+  T AAA KPTTSSSSD N
Subjt:  KLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDAN

A0A6J1G133 homeobox protein KNOX31.2e-4774.15Show/hide
Query:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA
        M+S N+  ++    +L++   EE+ G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIGE LDRGYLA DL+E ++N+IRCLNTLNQSELDRFME+YC+A
Subjt:  MESENNCNEERQEHELEV---EEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFA

Query:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA
        LSKLKEAMEESQLKSMAFINSM+SQLRELT TGAAAKKPT +SSS A
Subjt:  LSKLKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA

A0A6J1IFV6 homeobox protein KNOX3-like2.1e-4774.31Show/hide
Query:  MESENNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSK
        M+S N+  ++  + + E E++    GE+LRRRISSHPLYGLL++THLNCLKVGGIGE LDRGYLA DL+E ++N+IRCLNTLNQSELDRFME+YC+ALSK
Subjt:  MESENNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSK

Query:  LKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA
        LKEAMEESQLKSMAFINSM+SQLRELT TGAAAKKPT +SSS A
Subjt:  LKEAMEESQLKSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDA

SwissProt top hitse value%identityAlignment
O65034 Homeobox protein knotted-1-like 122.1e-0732.74Show/hide
Query:  EEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSM
        E +  E E ++ +I +HP Y  L+  +L+C KVG   E+L+R    T    + D +    +     ELD+FME YC  L+K +E +     ++M F+  +
Subjt:  EEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSM

Query:  HSQLRELTVTGAA
         SQL   T+ G A
Subjt:  HSQLRELTVTGAA

O80416 Homeobox protein knotted-1-like 122.1e-0732.74Show/hide
Query:  EEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSM
        E +  E E ++ +I +HP Y  L+  +L+C KVG   E+L+R    T    + D +    +     ELD+FME YC  L+K +E +     ++M F+  +
Subjt:  EEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSM

Query:  HSQLRELTVTGAA
         SQL   T+ G A
Subjt:  HSQLRELTVTGAA

P24345 Homeotic protein knotted-12.1e-0731.36Show/hide
Query:  EILRRRISSHPLYGLLVETHLNCLKVGGIGELLDR-GYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLRE
        E ++ +I SHP Y  L+  +L C KVG   E+  R   +A ++  +Q   +  L    + ELD+FME Y   L K +E +     ++M F+  + SQL  
Subjt:  EILRRRISSHPLYGLLVETHLNCLKVGGIGELLDR-GYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLRE

Query:  LTVTGAAAKKPTTSSSSD
        L+++G + +   +S SS+
Subjt:  LTVTGAAAKKPTTSSSSD

P46609 Homeobox protein knotted-1-like 61.4e-0832.2Show/hide
Query:  EILRRRISSHPLYGLLVETHLNCLKVGGIGELLDR-GYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLRE
        E ++ +I SHP Y  L+  +L+C KVG   E+  R   +A DL  +Q   +  L    + ELD+FME Y   L K +E +     ++M F+  + +QL  
Subjt:  EILRRRISSHPLYGLLVETHLNCLKVGGIGELLDR-GYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLRE

Query:  LTVTGAAAKKPTTSSSSD
        L+++G + +   +S SS+
Subjt:  LTVTGAAAKKPTTSSSSD

P46640 Homeobox protein knotted-1-like 22.1e-0732.11Show/hide
Query:  ILRRRISSHPLYGLLVETHLNCLKVGG---IGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLR
        +++ +I+SHPLY  L++T+++C KVG    I  +L+       + ++    + C       ELD FMETYC  L K K  +     ++  FIN +  QL+
Subjt:  ILRRRISSHPLYGLLVETHLNCLKVGG---IGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLR

Query:  ELTVTGAAA
         L    A+A
Subjt:  ELTVTGAAA

Arabidopsis top hitse value%identityAlignment
AT1G14760.1 KNOX Arabidopsis thaliana meinox1.2e-0741.41Show/hide
Query:  ESENNCNEE-RQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKV-GGIGELLDRGYLATDL-IEQQDNKIRCLNTLNQSELDRFMETYCFA
        + EN+  E  +QE    ++EEA  E EIL++RISSHPLYGLL+ +HLNCLKV  G  +  +    A DL + +        +    SELD+FM  + F+
Subjt:  ESENNCNEE-RQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKV-GGIGELLDRGYLATDL-IEQQDNKIRCLNTLNQSELDRFMETYCFA

AT1G14760.2 KNOX Arabidopsis thaliana meinox2.8e-1540.46Show/hide
Query:  ESENNCNEE-RQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKV-GGIGELLDRGYLATDL-IEQQDNKIRCLNTLNQSELDRFMETYCFAL
        + EN+  E  +QE    ++EEA  E EIL++RISSHPLYGLL+ +HLNCLKV  G  +  +    A DL + +        +    SELD+FME YC  L
Subjt:  ESENNCNEE-RQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKV-GGIGELLDRGYLATDL-IEQQDNKIRCLNTLNQSELDRFMETYCFAL

Query:  SKLKEAMEESQLKSMAFINSMHSQLRELTVT
         +LKEAME+   ++  F++++++QL ++ ++
Subjt:  SKLKEAMEESQLKSMAFINSMHSQLRELTVT

AT1G14760.3 KNOX Arabidopsis thaliana meinox5.0e-0932.56Show/hide
Query:  ESENNCNEE-RQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSK
        + EN+  E  +QE    ++EEA  E EIL++RISSHPLYGLL+ +HLNCLK                                        E YC  L +
Subjt:  ESENNCNEE-RQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSK

Query:  LKEAMEESQLKSMAFINSMHSQLRELTVT
        LKEAME+   ++  F++++++QL ++ ++
Subjt:  LKEAMEESQLKSMAFINSMHSQLRELTVT

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 21.5e-0832.11Show/hide
Query:  ILRRRISSHPLYGLLVETHLNCLKVGG---IGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLR
        +++ +I+SHPLY  L++T+++C KVG    I  +L+       + ++    + C       ELD FMETYC  L K K  +     ++  FIN +  QL+
Subjt:  ILRRRISSHPLYGLLVETHLNCLKVGG---IGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLR

Query:  ELTVTGAAA
         L    A+A
Subjt:  ELTVTGAAA

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana1.9e-0833.33Show/hide
Query:  EILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIE--QQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLR
        E ++ +I +HP Y  L++ +L+C K+G   +++DR   A    E  QQ +      +    ELD+FME YC  L K +E +     ++M FI  + SQL 
Subjt:  EILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIE--QQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINSMHSQLR

Query:  EL
         L
Subjt:  EL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTGAGAACAATTGTAATGAAGAACGACAAGAACACGAACTAGAAGTGGAAGAAGAAGCTGGCAGGGAAGGAGAAATCCTGCGCAGGAGAATTTCCAGCCATCC
CTTGTACGGGCTGTTAGTCGAGACTCACCTCAACTGTTTGAAGGTTGGAGGTATAGGTGAATTATTGGACAGAGGTTACTTAGCTACGGATTTGATCGAACAGCAAGATA
ACAAGATCAGATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGTTTCATGGAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCGATGGAGGAATCTCAGTTA
AAATCAATGGCATTCATAAACAGCATGCACTCGCAATTAAGGGAGCTCACGGTCACCGGTGCAGCAGCCAAGAAACCCACCACCTCATCTTCTAGTGACGCAAACTGA
mRNA sequenceShow/hide mRNA sequence
AGGAGAGGGAGCAGAAAGGGCACACCCACTGGCATCCATTACTACTGTTCTGACTCACAATGCGGAAACCCTGATTATATTTTCTGAAAGAACGAGGCTGAATTCGGGGT
GTATTAAGAAGCTCAAATGGAGTCTGAGAACAATTGTAATGAAGAACGACAAGAACACGAACTAGAAGTGGAAGAAGAAGCTGGCAGGGAAGGAGAAATCCTGCGCAGGA
GAATTTCCAGCCATCCCTTGTACGGGCTGTTAGTCGAGACTCACCTCAACTGTTTGAAGGTTGGAGGTATAGGTGAATTATTGGACAGAGGTTACTTAGCTACGGATTTG
ATCGAACAGCAAGATAACAAGATCAGATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGTTTCATGGAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCGAT
GGAGGAATCTCAGTTAAAATCAATGGCATTCATAAACAGCATGCACTCGCAATTAAGGGAGCTCACGGTCACCGGTGCAGCAGCCAAGAAACCCACCACCTCATCTTCTA
GTGACGCAAACTGAAGCCAAGCAAGTAGAATATAATATATAATGGATATAATTTGTTCTCTAACCCCTACTTTTCTACGGAGTACGGACCAAGGTCTCTAACACGGATAT
GTAAGAACAGCTGTAATACTAGTAGCTTGTGTTTTTGACATTAACTAGGGTAATCGTCTTGATCGCTGCGAATCTATATTAACGGTTGGAGATAATAATATTGATCTATA
GGAGGGACTCACGCAAAATTATTGATTCTAGTCCCGAATAAAACTTGCGTGCTATTTTTTTTTTGCACCCAAGCCAATATTT
Protein sequenceShow/hide protein sequence
MESENNCNEERQEHELEVEEEAGREGEILRRRISSHPLYGLLVETHLNCLKVGGIGELLDRGYLATDLIEQQDNKIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQL
KSMAFINSMHSQLRELTVTGAAAKKPTTSSSSDAN