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Tan0009179 (gene) of Snake gourd v1 genome

Gene IDTan0009179
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFiber protein fb11
Genome locationLG06:38846761..38852398
RNA-Seq ExpressionTan0009179
SyntenyTan0009179
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459762.1 PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo]9.5e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASC+IGGIGL LPA VRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_022958795.1 uncharacterized protein LOC111459960 [Cucurbita moschata]1.2e-2295.24Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLIGGIGL LPAVVRPILDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_022959928.1 uncharacterized protein LOC111460833 [Cucurbita moschata]2.1e-2293.65Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASC+IGGIGL LPAVVRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_023006679.1 uncharacterized protein LOC111499335 [Cucurbita maxima]1.6e-2293.65Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLIGG+GL LPAVVRPILDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_038875998.1 uncharacterized protein LOC120068338 [Benincasa hispida]5.6e-2396.83Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASCLIGGIGL LPA VRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
TrEMBL top hitse value%identityAlignment
A0A1S3CAX6 uncharacterized protein LOC1034987994.6e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASC+IGGIGL LPA VRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1H4H1 uncharacterized protein LOC1114599606.0e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLIGGIGL LPAVVRPILDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1H9H3 uncharacterized protein LOC1114608331.0e-2293.65Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASC+IGGIGL LPAVVRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1L2U6 uncharacterized protein LOC1114993357.8e-2393.65Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLIGG+GL LPAVVRPILDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
E5GCM8 Fiber protein fb114.6e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASC+IGGIGL LPA VRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein5.0e-2280.95Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKL+MFV QEPVVAASCLIGG+GL LPAVVRPILDS EASKQV  P L+DV+A +TGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTTGTTCAAGAGCCTGTGGTGGCCGCATCTTGTTTAATCGGTGGAATTGGTCTCCTCCTTCCAGCCGTTGTAAGACCAAT
TCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTTGTTCAAGAGCCTGTGGTGGCCGCATCTTGTTTAATCGGTGGAATTGGTCTCCTCCTTCCAGCCGTTGTAAGACCAAT
TCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAA
Protein sequenceShow/hide protein sequence
MPVMEKLKMFVVQEPVVAASCLIGGIGLLLPAVVRPILDSYEASKQVPQPVLSDVVASMTGKK