CuGenDBv2

Gene ID	Tan0009187
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Trigger_N domain-containing protein
Genome location	LG06:22359671..22364114
RNA-Seq Expression	Tan0009187
Synteny	Tan0009187
Gene Ontology terms	GO:0000413 - protein peptidyl-prolyl isomerization (biological process) GO:0015031 - protein transport (biological process) GO:0043335 - protein unfolding (biological process) GO:0051083 - 'de novo' cotranslational protein folding (biological process) GO:0061077 - chaperone-mediated protein folding (biological process) GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005215 - Trigger factor IPR008881 - Trigger factor, ribosome-binding, bacterial IPR036611 - Trigger factor ribosome-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460020.1 PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]

5.5e-105

88.21

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Query:  ASATATVTNIA-SEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV
        A+ATATVTNIA SEF RPIF+K  V G   NALVCLNFGGVEF NVQDGLCRRSSFSYS H +GSRFLS+PTSIASSGLEAA+TDYKGNAITLKNAK+ V
Subjt:  ASATATVTNIA-SEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV

Query:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV
        ESE+ENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKD KVNTTQT 
Subjt:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV

Query:  DELKVLFSPGKEFGFNAILELESAAEVEN
        DELKVLF+PGKEFGFNAILELESA++ E+
Subjt:  DELKVLFSPGKEFGFNAILELESAAEVEN

XP_011656737.1 uncharacterized protein LOC101212225 [Cucumis sativus]

1.5e-105

87.72

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Query:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE
        A+ATATVTNIASEF RPIF+K PV G   NALVCLNFGGVEF NV+DGLCRRSSFSYS H +GSRFLS+PTSIASSGLEAAITDYKGN ITLKNAK+ VE
Subjt:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE

Query:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD
        SE+ENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNSTM DYAKKENINVKDKKV+TTQT D
Subjt:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD

Query:  ELKVLFSPGKEFGFNAILELESAAEVEN
        ELKVLF+PGKEFGFNAILELESA++ E+
Subjt:  ELKVLFSPGKEFGFNAILELESAAEVEN

XP_022960370.1 uncharacterized protein LOC111461115 [Cucurbita moschata]

4.9e-101

87.72

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Query:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV
        MASATATV NIASEFRRP+F+K PVNG  RNALVCLNFGGVEF NVQD LC RSS SYSP ++GSRFLSRPT+IASSGLEAAITDYKG AITLKNAKI V
Subjt:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV

Query:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV
        ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAP MPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM DYAKKENI VKDK VNTTQT 
Subjt:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV

Query:  DELKVLFSPGKEFGFNAILELESAAEVE
        DELK LF PGKEFGFNAILELE   E E
Subjt:  DELKVLFSPGKEFGFNAILELESAAEVE

XP_023513631.1 uncharacterized protein LOC111778179 isoform X1 [Cucurbita pepo subsp. pepo]

1.1e-100

87.28

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Query:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV
        MASATATV NIA EFRRP+F+K PVNG  RNALVCLNFGGVEF NVQD LC RSS SYSP ++GSRFLSRPT+IASSGLEAAITDYKG AITLKNAKI V
Subjt:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV

Query:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV
        ESEDE+ IQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKE+I VKDK VNTTQT 
Subjt:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV

Query:  DELKVLFSPGKEFGFNAILELESAAEVE
        DELKVLF PGKEFGFNAILELE   E E
Subjt:  DELKVLFSPGKEFGFNAILELESAAEVE

XP_038906537.1 uncharacterized protein LOC120092511 [Benincasa hispida]

1.2e-107

89.91

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Query:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE
        A+ATAT TNIASEFR PIF++ PV G  RN LVCLNFGGVEF NVQDGLCRRSSFSYS H +GSRFLS+PTSIASSGLEAAITDYKGNAITLKNAK+ VE
Subjt:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE

Query:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD
        SE+ENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRV KFVIQEILNSTMADYAKKENINVKDKKVNTTQT D
Subjt:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD

Query:  ELKVLFSPGKEFGFNAILELESAAEVEN
        ELKVLFSPGKEFGFNAILELESA++ EN
Subjt:  ELKVLFSPGKEFGFNAILELESAAEVEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K988 Trigger_N domain-containing protein

7.1e-106

87.72

Show/hide

Query:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE
        A+ATATVTNIASEF RPIF+K PV G   NALVCLNFGGVEF NV+DGLCRRSSFSYS H +GSRFLS+PTSIASSGLEAAITDYKGN ITLKNAK+ VE
Subjt:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE

Query:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD
        SE+ENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNSTM DYAKKENINVKDKKV+TTQT D
Subjt:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD

Query:  ELKVLFSPGKEFGFNAILELESAAEVEN
        ELKVLF+PGKEFGFNAILELESA++ E+
Subjt:  ELKVLFSPGKEFGFNAILELESAAEVEN

A0A1S3CBN2 uncharacterized protein LOC103498959

2.7e-105

88.21

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Query:  ASATATVTNIA-SEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV
        A+ATATVTNIA SEF RPIF+K  V G   NALVCLNFGGVEF NVQDGLCRRSSFSYS H +GSRFLS+PTSIASSGLEAA+TDYKGNAITLKNAK+ V
Subjt:  ASATATVTNIA-SEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV

Query:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV
        ESE+ENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKD KVNTTQT 
Subjt:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV

Query:  DELKVLFSPGKEFGFNAILELESAAEVEN
        DELKVLF+PGKEFGFNAILELESA++ E+
Subjt:  DELKVLFSPGKEFGFNAILELESAAEVEN

A0A6J1DRL2 uncharacterized protein LOC111022553

1.2e-100

86.16

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Query:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV
        MASATATVTN+ASE+RR  F K PV G  R+ L C N GGVEF NVQ+GLCRRSSFS SPH +GSRFLSRPTSIASSGLEAAITDYKGNAI LKNAKI V
Subjt:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV

Query:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV
        ESEDEN IQLRVDL+GDETQK+FDQVLTNLARSAPPMPGFR QKGGKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMADYAKKEN+NVKDKKVNTTQT 
Subjt:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV

Query:  DELKVLFSPGKEFGFNAILELESA
        DELK+LF+PGKEFGFNAILELESA
Subjt:  DELKVLFSPGKEFGFNAILELESA

A0A6J1H8V8 uncharacterized protein LOC111461115

2.4e-101

87.72

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Query:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV
        MASATATV NIASEFRRP+F+K PVNG  RNALVCLNFGGVEF NVQD LC RSS SYSP ++GSRFLSRPT+IASSGLEAAITDYKG AITLKNAKI V
Subjt:  MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAV

Query:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV
        ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAP MPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM DYAKKENI VKDK VNTTQT 
Subjt:  ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTV

Query:  DELKVLFSPGKEFGFNAILELESAAEVE
        DELK LF PGKEFGFNAILELE   E E
Subjt:  DELKVLFSPGKEFGFNAILELESAAEVE

A0A6J1KVH6 uncharacterized protein LOC111497577

1.5e-100

85.96

Show/hide

Query:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE
        A+ATATV NIASEFRRP+F+K PVNG  RNAL+C+NFGGVEF NVQD LC RSS SYS  ++GSRFLSRPT+IASSGLEAAITDYKG AITLKNAKI VE
Subjt:  ASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVE

Query:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD
        SEDENKIQLRV+LTGDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENI VKDK VNTTQT D
Subjt:  SEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVD

Query:  ELKVLFSPGKEFGFNAILELESAAEVEN
        ELKVLF PGKEFGFNAILELE   E+++
Subjt:  ELKVLFSPGKEFGFNAILELESAAEVEN

SwissProt top hits

e value

%identity

Alignment

B1XL18 Trigger factor

1.2e-06

24.81

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Query:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        K+  E    +++ L +++  D TQK +D  +  LAR+   +PGFR+ K      VPK  L++ LG +R+   V++++++ ++     +ENI         
Subjt:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQTVDELKVLFSPGKEFGFNAILELESAAEVEN
          + D+L   + PG+   F A +++ +   + +
Subjt:  TQTVDELKVLFSPGKEFGFNAILELESAAEVEN

B2IT89 Trigger factor

4.0e-05

27.78

Show/hide

Query:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        K+  E    ++I L +++T + T++ ++QV+ NLA +A  +PGFRR K      VP+  LL+ LG  R+    ++E++   +    K+E I    +    
Subjt:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQTVDELKVLFSPGKEFGFNAILELE
          + ++L   + PGK     A +++E
Subjt:  TQTVDELKVLFSPGKEFGFNAILELE

Q3M725 Trigger factor

2.5e-07

29.37

Show/hide

Query:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        K+  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFR+ K      VP+  LL+ LGK  +    ++E+L   +    K+E+I    +    
Subjt:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQTVDELKVLFSPGKEFGFNAILELE
          + D+L   + PG+   F A +++E
Subjt:  TQTVDELKVLFSPGKEFGFNAILELE

Q8YQX9 Trigger factor

2.5e-07

29.37

Show/hide

Query:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        K+  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFR+ K      VP+  LL+ LGK  +    ++E+L   +    K+E+I    +    
Subjt:  KIAVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQTVDELKVLFSPGKEFGFNAILELE
          + D+L   + PG+   F A +++E
Subjt:  TQTVDELKVLFSPGKEFGFNAILELE

Arabidopsis top hits

e value

%identity

Alignment

AT2G30695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

1.6e-25

42.06

Show/hide

Query:  VESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQT
        VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFRR KGGKT N+PK  LLE+LG  +V K VI++++NS + DY K+E++ V  K++   Q+
Subjt:  VESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQT

Query:  VDELKVLFSPGKEFGFNAILELESAA
         ++L+  F PG+ F F+A ++L+ A+
Subjt:  VDELKVLFSPGKEFGFNAILELESAA

AT2G30695.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

1.6e-25

42.06

Show/hide

Query:  VESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQT
        VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFRR KGGKT N+PK  LLE+LG  +V K VI++++NS + DY K+E++ V  K++   Q+
Subjt:  VESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQT

Query:  VDELKVLFSPGKEFGFNAILELESAA
         ++L+  F PG+ F F+A ++L+ A+
Subjt:  VDELKVLFSPGKEFGFNAILELESAA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTCCGCAACCGCAACGGTAACCAACATCGCCTCAGAATTCCGCCGCCCAATATTCTCCAAAGCTCCTGTTAATGGCTGCCTCCGCAATGCTCTGGTTTGTCTGAA
CTTTGGAGGCGTTGAATTTGGTAATGTACAAGATGGGCTGTGTAGGAGGTCGTCGTTTTCTTATAGTCCGCATATAATGGGTTCCAGATTTTTGTCCAGACCGACGTCTA
TAGCTAGTTCGGGTTTGGAGGCAGCCATCACAGATTACAAAGGGAATGCAATAACCTTAAAAAATGCTAAAATAGCTGTAGAATCTGAAGATGAAAACAAGATACAACTA
AGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAAGTTTTGACCAATTTGGCCCGCTCAGCACCGCCAATGCCAGGATTTCGTAGGCAAAAAGGAGGGAA
AACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGATAGGGTCACAAAGTTTGTCATACAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGA
AGGAAAATATAAATGTGAAGGACAAGAAGGTTAACACAACACAAACAGTAGATGAACTGAAAGTGTTGTTTAGTCCAGGAAAAGAGTTTGGTTTCAATGCTATACTTGAG
CTTGAATCTGCTGCAGAGGTTGAAAATTGA

mRNA sequence

Show/hide mRNA sequence

CTTGGATAAGTCTCCACTCTGTAAGAACAGAAGAGAGAAACTTCAAGCTGAAGCGCGCTTGAAGAAATGGCGTCCGCAACCGCAACGGTAACCAACATCGCCTCAGAATT
CCGCCGCCCAATATTCTCCAAAGCTCCTGTTAATGGCTGCCTCCGCAATGCTCTGGTTTGTCTGAACTTTGGAGGCGTTGAATTTGGTAATGTACAAGATGGGCTGTGTA
GGAGGTCGTCGTTTTCTTATAGTCCGCATATAATGGGTTCCAGATTTTTGTCCAGACCGACGTCTATAGCTAGTTCGGGTTTGGAGGCAGCCATCACAGATTACAAAGGG
AATGCAATAACCTTAAAAAATGCTAAAATAGCTGTAGAATCTGAAGATGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCA
AGTTTTGACCAATTTGGCCCGCTCAGCACCGCCAATGCCAGGATTTCGTAGGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTA
AGGATAGGGTCACAAAGTTTGTCATACAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGAAGGAAAATATAAATGTGAAGGACAAGAAGGTTAACACAACACAA
ACAGTAGATGAACTGAAAGTGTTGTTTAGTCCAGGAAAAGAGTTTGGTTTCAATGCTATACTTGAGCTTGAATCTGCTGCAGAGGTTGAAAATTGAGCCAAACAGATCCC
ATTTTCCAATCATTCTTTCTTGGCCCTCTTTCAAAGTTTTGGAAATTTTACTTAAATTGATGTACAGTTGAATACCAATTCTAATTGCTTGTTTCATATAATTTTATTTT
ATTGAAGGACAAAATAAATCATCTAATTTTTTTTGTACATGTGAAATGAATAGTTGCGGTTGAGCAGATTGATTGTTTA

Protein sequence

Show/hide protein sequence

MASATATVTNIASEFRRPIFSKAPVNGCLRNALVCLNFGGVEFGNVQDGLCRRSSFSYSPHIMGSRFLSRPTSIASSGLEAAITDYKGNAITLKNAKIAVESEDENKIQL
RVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQTVDELKVLFSPGKEFGFNAILE
LESAAEVEN

Tan0009187 (gene) of Snake gourd v1 genome