; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009192 (gene) of Snake gourd v1 genome

Gene IDTan0009192
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationLG08:1954076..1956757
RNA-Seq ExpressionTan0009192
SyntenyTan0009192
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586405.1 hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5289.9Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CGAHNYASR +CYRCNAYKS DIGALPGWKSGDWICNR  C
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC

XP_022937997.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]7.5e-5289.9Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CGAHNYASRS+CYRCNAYKS DI ALPGWKSGDWICNR  C
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC

XP_022966014.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]2.3e-5391.92Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEV LAGDW+C+CGAHNYASRS+CYRCNAYKS DIGALPGWKSGDWICNR  C
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC

XP_023538268.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]6.8e-5390.91Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CGAHNYASRS+CYRCNAYKS DIGALPGWKSGDWICNR  C
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC

XP_038890693.1 zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]3.2e-5082.35Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE---YNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+ Y+   ++KT+ +LAGDW+CNCGAHNYASRSTCYRCNAYK++D+GALPGWKSGDWIC R 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE---YNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRW

Query:  SC
         C
Subjt:  SC

TrEMBL top hitse value%identityAlignment
A0A0A0LIX1 Uncharacterized protein8.4e-4981.31Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN-----KTEVLLAGDWHCNCGAHNYASRSTCYRC--NAYKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY +YN      T+ +LAGDW+CNCGAHNYASRS+CY+C  NAYKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN-----KTEVLLAGDWHCNCGAHNYASRSTCYRC--NAYKSVDIGALPGWKSGDW

Query:  ICNRWSC
        IC+R  C
Subjt:  ICNRWSC

A0A1S3C6B6 uncharacterized RNA-binding protein C17H9.04c1.1e-4881.31Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN-----KTEVLLAGDWHCNCGAHNYASRSTCYRC--NAYKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN      T+ +LAGDW+CNCGAHNYASRS+CYRC  NAYKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN-----KTEVLLAGDWHCNCGAHNYASRSTCYRC--NAYKSVDIGALPGWKSGDW

Query:  ICNRWSC
        IC+R  C
Subjt:  ICNRWSC

A0A6J1CPG4 uncharacterized RNA-binding protein C17H9.04c-like9.9e-5085.58Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKT--EVLLAGDWHCNCGAHNYASRSTCYRC--NAYKSVD-IGALPGWKSGDWICN
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT  + LLAGDW+CNCGAHNYASRS CYRC  NA+K+VD IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKT--EVLLAGDWHCNCGAHNYASRSTCYRC--NAYKSVD-IGALPGWKSGDWICN

Query:  RWSC
        R  C
Subjt:  RWSC

A0A6J1FCS1 zinc finger Ran-binding domain-containing protein 2-like3.6e-5289.9Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CGAHNYASRS+CYRCNAYKS DI ALPGWKSGDWICNR  C
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC

A0A6J1HSH3 zinc finger Ran-binding domain-containing protein 2-like1.1e-5391.92Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEV LAGDW+C+CGAHNYASRS+CYRCNAYKS DIGALPGWKSGDWICNR  C
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17975.1 zinc finger (Ran-binding) family protein1.9e-0827.52Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPK----------------------YGGPDP------------TTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRC
        GDW+C  C + N+  RE C++CG  K                        GP+              T + +  +   +GDW C CG HNY+SR  C +C
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPK----------------------YGGPDP------------TTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRC

Query:  NAYKSVDIG
        N    + +G
Subjt:  NAYKSVDIG

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein5.6e-3754.31Show/hide
Query:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHC---NCGAHNYASRSTCYRCN----------------AYKSVDIGA
        M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY YN+TEV +AGDW+C   NCG+HNYASR++CYRC                 AY +     
Subjt:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHC---NCGAHNYASRSTCYRCN----------------AYKSVDIGA

Query:  LPGWKSGDWICNRWSC
         PGWK+GDW+C R  C
Subjt:  LPGWKSGDWICNRWSC

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein3.6e-2034.33Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNKTEVLLAGDWHC---NCGAHNYASRSTCYRCNAYK--------------
        GDW C  C H+NF++R++CQRCG             +  +GG   + + +     +  GDW+C   NCG HN+ASRSTC++C  +K              
Subjt:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNKTEVLLAGDWHC---NCGAHNYASRSTCYRCNAYK--------------

Query:  ----SVDI--------GALPGWKSGDWICNRWSC
              DI        G    WKSGDWIC R  C
Subjt:  ----SVDI--------GALPGWKSGDWICNRWSC

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein2.4e-1932.86Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNKTEVLLAGDWHCN---CGAHNYASRSTCYRCNAYK---------------
        GDW C +C H+NF++R++CQRC  P+ GG            P  +++ +N    +  GDW+CN   CG HN+A+RS+C++C A K               
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNKTEVLLAGDWHCN---CGAHNYASRSTCYRCNAYK---------------

Query:  SVDIGALPG------------------WKSGDWICNRWSC
         +++G   G                  WKSGDWIC R  C
Subjt:  SVDIGALPG------------------WKSGDWICNRWSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGAATTGGTCAGGAGGTGATTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCAAAATATGGTGGCCC
TGACCCAACAACATACGAATACAACAAAACAGAAGTACTCTTAGCAGGAGATTGGCATTGCAATTGTGGAGCACATAATTATGCCAGTCGATCAACTTGTTATAGATGTA
ATGCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGGGATTGGATCTGCAATAGGTGGAGCTGTTTGAAACTAAGGAAACGGATTTTTGAAGAACTC
TTAAGGGGTGCTAATATTTGGCCAACTTACAAGCTTCTAGCATCTGATGCCCTCCAATTTGCTTCTTTTTTTTCTTTCTTTTTTGGATTGGGACTCTAA
mRNA sequenceShow/hide mRNA sequence
CAAAACCTTTCATTCACCAAATTTCATTTCCAAATTCAAAATTCAACAAAACCCTTCACAAGCCCAAACCAACTAAATTTCAAGGGCGACACGATGAATATGAATTGGTC
AGGAGGTGATTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCAAAATATGGTGGCCCTGACCCAACAACATACG
AATACAACAAAACAGAAGTACTCTTAGCAGGAGATTGGCATTGCAATTGTGGAGCACATAATTATGCCAGTCGATCAACTTGTTATAGATGTAATGCATATAAGAGTGTC
GATATTGGTGCCTTGCCTGGTTGGAAATCTGGGGATTGGATCTGCAATAGGTGGAGCTGTTTGAAACTAAGGAAACGGATTTTTGAAGAACTCTTAAGGGGTGCTAATAT
TTGGCCAACTTACAAGCTTCTAGCATCTGATGCCCTCCAATTTGCTTCTTTTTTTTCTTTCTTTTTTGGATTGGGACTCTAATGCATTGAAAAAACCCAAAAAATCCCTT
TCTTAATCTCACTTTTGTACTAATTAATTAGAATTACATTTTTGTTGTCTCTCTCTCTCTTTCTACTATTGAATTTCAA
Protein sequenceShow/hide protein sequence
MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRWSCLKLRKRIFEEL
LRGANIWPTYKLLASDALQFASFFSFFFGLGL