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Tan0009212 (gene) of Snake gourd v1 genome

Gene IDTan0009212
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:30354676..30355089
RNA-Seq ExpressionTan0009212
SyntenyTan0009212
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]1.7e-3755.47Show/hide
Query:  MDSSSTLALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDF
        M SS  L  S+ L+L   L+  ++ ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F W++G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]1.9e-3655.73Show/hide
Query:  LALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR
        L  S+ L+L   L+  ++ ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F W++G  H F IYDF RD   
Subjt:  LALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.9e-2450.36Show/hide
Query:  MDSSSTLALSVLLMLFTC-LNGFEKSISLLPETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHN---F
        M SS TLALS LL+LF+C L   + SI + P TTV  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F
Subjt:  MDSSSTLALSVLLMLFTC-LNGFEKSISLLPETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHN---F

Query:  AIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
         I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  AIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]7.3e-3655.91Show/hide
Query:  VLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDC
        + L+L   L+  ++ ISLLPETTV  +N++ GP+L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTTLF C F W++G  H F IYDF RD   CT+C
Subjt:  VLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.6e-3557.02Show/hide
Query:  TCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYR
        T  +G  + ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F W++G  H F IYDF RD   CT+CRW +Y 
Subjt:  TCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTGTYNVCFPWN
         GPCL H + + T   CFPWN
Subjt:  DGPCLLHPKDTGTYNVCFPWN

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog7.9e-3657.02Show/hide
Query:  TCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYR
        T  +G  + ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F W++G  H F IYDF RD   CT+CRW +Y 
Subjt:  TCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTGTYNVCFPWN
         GPCL H + + T   CFPWN
Subjt:  DGPCLLHPKDTGTYNVCFPWN

A0A5A7TWM4 Putative mitochondrial protein1.4e-2450.36Show/hide
Query:  MDSSSTLALSVLLMLFTC-LNGFEKSISLLPETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHN---F
        M SS TLALS LL+LF+C L   + SI + P TTV  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F
Subjt:  MDSSSTLALSVLLMLFTC-LNGFEKSISLLPETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHN---F

Query:  AIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
         I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  AIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

A0A5A7TXE8 S-protein homolog3.5e-3655.91Show/hide
Query:  VLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDC
        + L+L   L+  ++ ISLLPETTV  +N++ GP+L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTTLF C F W++G  H F IYDF RD   CT+C
Subjt:  VLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F817 S-protein homolog8.4e-3855.47Show/hide
Query:  MDSSSTLALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDF
        M SS  L  S+ L+L   L+  ++ ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F W++G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F818 S-protein homolog9.3e-3755.73Show/hide
Query:  LALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR
        L  S+ L+L   L+  ++ ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F W++G  H F IYDF RD   
Subjt:  LALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.6e-1741.18Show/hide
Query:  SLLPETTVTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG
        S+ P +  T  IN  +G  L++  HC+SKD+DLG   L P  S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+G
Subjt:  SLLPETTVTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG

Query:  PCLLHPKDTGTYNVCFPWN
        PC  +  +T  +++C+PWN
Subjt:  PCLLHPKDTGTYNVCFPWN

F4JZG1 S-protein homolog 42.7e-1743.36Show/hide
Query:  ETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ VT  N+L  G  L +HC+S D+DLG+ +L P  S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
         D   +N+C+ WN
Subjt:  KDTGTYNVCFPWN

O23020 S-protein homolog 56.7e-2448.57Show/hide
Query:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

P0DN93 S-protein homolog 299.6e-1536.94Show/hide
Query:  TVTTINKLVGP--VLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTY
        TV T+   + P   L++ CRSKD+DLG H+L    ++ + FRP+ + TTLF+C F+W       F  Y   RD   C  C W I  D  C+     +G +
Subjt:  TVTTINKLVGP--VLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTY

Query:  NV----CFPWN
        N     C+PWN
Subjt:  NV----CFPWN

Q9FMQ4 S-protein homolog 33.8e-1944Show/hide
Query:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        G  L++HC+S D+DLG+ +L P  S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.7e-2548.57Show/hide
Query:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family2.7e-2043.36Show/hide
Query:  PETTVTTINKLVGPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHP
        P TTV   N L G + L  HC+SK++DLG   +    ++SF FRP+V+G TLF C F+W +   H F IY   RD       C  C W+I +DGPC L+ 
Subjt:  PETTVTTINKLVGPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
        K++  ++VC PWN
Subjt:  KDTGTYNVCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family1.1e-1841.18Show/hide
Query:  SLLPETTVTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG
        S+ P +  T  IN  +G  L++  HC+SKD+DLG   L P  S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+G
Subjt:  SLLPETTVTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG

Query:  PCLLHPKDTGTYNVCFPWN
        PC  +  +T  +++C+PWN
Subjt:  PCLLHPKDTGTYNVCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family2.7e-2044Show/hide
Query:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        G  L++HC+S D+DLG+ +L P  S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

AT5G12070.1 Plant self-incompatibility protein S1 family1.9e-1843.36Show/hide
Query:  ETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ VT  N+L  G  L +HC+S D+DLG+ +L P  S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWLEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
         D   +N+C+ WN
Subjt:  KDTGTYNVCFPWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCGTCAACACTAGCACTTTCCGTCTTGCTAATGTTATTTACATGTCTAAATGGTTTTGAAAAATCAATCTCACTTCTGCCAGAAACTACAGTGACAACTAT
TAATAAACTGGTCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGCTTTGTATGGCTGGAAGGTGGGGCCCACAACTTTGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCGTCAACACTAGCACTTTCCGTCTTGCTAATGTTATTTACATGTCTAAATGGTTTTGAAAAATCAATCTCACTTCTGCCAGAAACTACAGTGACAACTAT
TAATAAACTGGTCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGCTTTGTATGGCTGGAAGGTGGGGCCCACAACTTTGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLLMLFTCLNGFEKSISLLPETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWLEGGAHNFAIYDFHRDANRCTDC
RWEIYRDGPCLLHPKDTGTYNVCFPWN