; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009236 (gene) of Snake gourd v1 genome

Gene IDTan0009236
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLocalized to the inner membrane of the chloroplast
Genome locationLG01:116645474..116649883
RNA-Seq ExpressionTan0009236
SyntenyTan0009236
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608647.1 hypothetical protein SDJN03_01989, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7791.76Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+A+SNSL+LTK PQLQLS+GSNLKTADKR GSVSPT  L NPGW+GKAKLSTFRRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

XP_022941515.1 uncharacterized protein LOC111446794 [Cucurbita moschata]2.5e-7892.35Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+A+SNSL+LTK PQLQLS+GSNLKTADKR GSVSPT LL NPGW+GKAKLSTFRRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

XP_022981122.1 uncharacterized protein LOC111480366 [Cucurbita maxima]4.3e-7892.35Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+A+SNSLVLTK PQLQLS+GSNLKTADKR GSVSPT LL NPGW+GKAKLSTFRRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

XP_023521457.1 uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]3.3e-7891.76Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+A+SNSL+LTK PQLQLS+GSNLKTADKR GSVSPT LL NPGW+GKAKLSTFRRPLSVQAAYSDGGRSS+AGIF+GGFVLGGL+VGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

XP_038900139.1 uncharacterized protein LOC120087268 [Benincasa hispida]6.6e-7994.12Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        MTA+SNSLVLTKNPQLQLS GSNLKTA+K LGSVSPTSLL  PGW+GK KLSTFRRPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTED PNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

TrEMBL top hitse value%identityAlignment
A0A1S3BV81 uncharacterized protein LOC1034938442.3e-7791.18Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        MTA+SNSLVLTKNPQLQL+ GSNLKT DKRLGS+SPTSL+ +PGW+GKAKLSTFRRPLSVQAAYSDGGRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        A+AGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR ED PNGVAVNSDEVE AI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

A0A6J1FC82 uncharacterized protein LOC1114427782.3e-7791.76Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M A+SNSLV TKNPQLQLSSGSNLKTADK LGSVSPTSLL NPGW+GKAKLST RRPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+D PNGVAVNSDE+EPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

A0A6J1FTW3 uncharacterized protein LOC1114467941.2e-7892.35Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+A+SNSL+LTK PQLQLS+GSNLKTADKR GSVSPT LL NPGW+GKAKLSTFRRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

A0A6J1IGB6 uncharacterized protein LOC1114744365.7e-7690.59Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M A+SNSLV TKNPQL LSSGSNLKTADK LGSVSPTSLL NPGW+GKAKLST RRPLSVQAAYSD GRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+D PNGVAVNSDE+EPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

A0A6J1IT36 uncharacterized protein LOC1114803662.1e-7892.35Show/hide
Query:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+A+SNSLVLTK PQLQLS+GSNLKTADKR GSVSPT LL NPGW+GKAKLSTFRRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.9.6e-4462.65Show/hide
Query:  SNSLVLTKNP-QLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFR--RPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKA
        S SL L KN  QL  SSG +L   + R  SVS     F      K  +S  R  R L++Q+AY D   S + G+F+GGF+LGGLIVG LGCVYAPQISKA
Subjt:  SNSLVLTKNP-QLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFR--RPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKA

Query:  LAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVE
        +AGADRKDLMRKLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VS+QL++ED+PNG A+++DE+E
Subjt:  LAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVE

AT3G02900.1 unknown protein2.8e-1136.7Show/hide
Query:  LSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPN
        LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VS++L+   S +
Subjt:  LSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPN

Query:  GVAVNSDEV
            +S  V
Subjt:  GVAVNSDEV

AT3G02900.2 unknown protein2.8e-1136.7Show/hide
Query:  LSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPN
        LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VS++L+   S +
Subjt:  LSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPN

Query:  GVAVNSDEV
            +S  V
Subjt:  GVAVNSDEV

AT5G16660.1 unknown protein2.1e-1442.62Show/hide
Query:  KLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ
        K S   R  SV A Y DG RS ++G F+ GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +KI QLNSAID VS++
Subjt:  KLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ

Query:  LRTED---SPNGVAVNSD-EVE
        LR  +   S   V V +D EVE
Subjt:  LRTED---SPNGVAVNSD-EVE

AT5G16660.2 unknown protein3.3e-1241.8Show/hide
Query:  KLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ
        K S   R  SV A   DG RS ++G F+ GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +KI QLNSAID VS++
Subjt:  KLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ

Query:  LRTED---SPNGVAVNSD-EVE
        LR  +   S   V V +D EVE
Subjt:  LRTED---SPNGVAVNSD-EVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCCATGTCCAATTCATTGGTTTTAACGAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACGTCTTGGGAGCGTGTCTCCTAC
CAGCTTGTTATTCAATCCTGGTTGGTTGGGAAAGGCGAAGCTTTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCGTATAGTGATGGTGGACGGTCAAGCAATGCAG
GCATTTTTATGGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAGCGGACCGAAAGGATTTG
ATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTC
TGCTCAGCTACGCACAGAGGATTCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTTGAACCTGCCATTTGA
mRNA sequenceShow/hide mRNA sequence
AATCTGTTTTCGCCTCTCAACCGTCTCTTCTCCACATTCACATTTTTACAAACCACACTCTCTCGACTCTCGACTCTCGACTCTCTCTCTTCTGTTCATCTTTGGGACTC
AACGATGACTGCCATGTCCAATTCATTGGTTTTAACGAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACGTCTTGGGAGCGTGTCTC
CTACCAGCTTGTTATTCAATCCTGGTTGGTTGGGAAAGGCGAAGCTTTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCGTATAGTGATGGTGGACGGTCAAGCAAT
GCAGGCATTTTTATGGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAGCGGACCGAAAGGA
TTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGG
TTTCTGCTCAGCTACGCACAGAGGATTCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTTGAACCTGCCATTTGAAAGTATCGTTACATTGGTCTTTACCGCCCACGA
CTTCGCGACTCATAATAATAGTTAATTTTCTAGCTATTATCTTTGATTTTCTCTGTCTTAAAACATTTGGATCCGAGCTTTGATGTGCATTACACATCATCGCATAATGT
GTTGCTATGATCGCTCAAATGCTCCTTATAAAGTTGAATAGATTTGTAGAAGAGCATTCTTCTGTTTCCTATTTTGTATTTGAAACAGGCCTTTTATTTCATCATCTCTT
CGGCCTTTTA
Protein sequenceShow/hide protein sequence
MTAMSNSLVLTKNPQLQLSSGSNLKTADKRLGSVSPTSLLFNPGWLGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDL
MRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDSPNGVAVNSDEVEPAI