| GenBank top hits | e value | %identity | Alignment |
|---|
| GEV76700.1 retrotransposon protein, putative, Ty3-gypsy subclass [Tanacetum cinerariifolium] | 1.6e-24 | 32.46 | Show/hide |
Query: QIGNSGGDRPQC---KECGKRPLGGYTSGRAYASTGRDIYGSDSVVLCTLPLLGHLAFVLFDSQFYAVFYSATFAKVI---------------ASGS-LG
+ GN+G + C K G G GR YA GRD +V+ T L H A +LFD+ F S TF+ +I A G +G
Subjt: QIGNSGGDRPQC---KECGKRPLGGYTSGRAYASTGRDIYGSDSVVLCTLPLLGHLAFVLFDSQFYAVFYSATFAKVI---------------ASGS-LG
Query: VLACILDARCTEISVTSHYKKRIH------ALCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVH
L T+ + KR+ CIDY ELNK+T+KN+YP RIDDLFD+ G V+ KID RS + REEDIPKT
Subjt: VLACILDARCTEISVTSHYKKRIH------ALCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVH
Query: GDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVFIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTR
P FMDLMNR + D FVIVFIDDI+IYS W HV+ + + K+E +
Subjt: GDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVFIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTR
Query: WPRPTTDSE-----------KVVGRMRCKDGKVIAYASRQLK
W P T +E K +G + ++ KVIAYAS+QLK
Subjt: WPRPTTDSE-----------KVVGRMRCKDGKVIAYASRQLK
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| GEW72254.1 putative reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] | 4.2e-25 | 58.72 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPR-SLPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
+CIDY ELNK+T+KN+YP RIDDLFD+ G V+SKID R + REEDIPK + +LW LR+ G +WFD+R FMDLMNR + D FVIV
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPR-SLPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
Query: FIDDILIYS
FIDDILIYS
Subjt: FIDDILIYS
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| KAA0051239.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-24 | 40.74 | Show/hide |
Query: CIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
CIDY ELNKVT+KNKYP SRIDDLFD+ G VFSKID RS + ++ D+PKT P FMDLMNR + DTFVIVF
Subjt: CIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
Query: IDDILIYSG----------------WHVVSESWVSL-IRKVEEVTRWPRPTT--------------------------------------DSEKVVGRMR
IDDILIYS HVVS++ VS+ K+E VT WPRP+T S+K +G +
Subjt: IDDILIYSG----------------WHVVSESWVSL-IRKVEEVTRWPRPTT--------------------------------------DSEKVVGRMR
Query: CKDGKVIAYASRQLKT
+ GKV+AYASRQLK+
Subjt: CKDGKVIAYASRQLKT
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| TYK11149.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.6e-24 | 45.71 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRSLPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
LCIDY ELNKVT+KN YP RIDDLFD+ G VFSKID + ++ ++ D+PKT P FMDLMNR + DTFVIVF
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRSLPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
Query: IDDILIYSGWHVVSESWVSLIRKVEEVTRWPRPTTDSE---------------KVVGRMRCKDGKVIAYASRQLK
IDDILIYS V E + K+E +T WPRP+T SE K +G + + G V+AYASRQLK
Subjt: IDDILIYSGWHVVSESWVSLIRKVEEVTRWPRPTTDSE---------------KVVGRMRCKDGKVIAYASRQLK
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| TYK22669.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.7e-24 | 39.47 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
LCIDY ELNKVT+KN+YP RIDDLFD+ G VFSKID RS + R+ DIPKT P FMDLMNR + D+FVIV
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
Query: FIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTRWPRPTTDSE----------------------
FIDDILIYS W HVVS VS+ + K+E VT WPRP+T SE
Subjt: FIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTRWPRPTTDSE----------------------
Query: -----KVVGRMRCKDGKVIAYASRQLKT
K +G M + G+V+AYASRQLK+
Subjt: -----KVVGRMRCKDGKVIAYASRQLKT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T6T6 Pol protein | 1.7e-24 | 41.28 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
LCIDY ELNKVT+KN+YP RIDDLFD+ G VFSKID RS + R+ DIPKT FMDLMNR + DTFVIV
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
Query: FIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTRWPRPTTDSE-----------------KVVGR
FIDDILIYS W HVVS VS+ K+E VT WPRP+T SE K +G
Subjt: FIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTRWPRPTTDSE-----------------KVVGR
Query: MRCKDGKVIAYASRQLKT
+ + GKV+AYASRQLK+
Subjt: MRCKDGKVIAYASRQLKT
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| A0A5A7UCL9 Ty3-gypsy retrotransposon protein | 1.7e-24 | 40.74 | Show/hide |
Query: CIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
CIDY ELNKVT+KNKYP SRIDDLFD+ G VFSKID RS + ++ D+PKT P FMDLMNR + DTFVIVF
Subjt: CIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
Query: IDDILIYSG----------------WHVVSESWVSL-IRKVEEVTRWPRPTT--------------------------------------DSEKVVGRMR
IDDILIYS HVVS++ VS+ K+E VT WPRP+T S+K +G +
Subjt: IDDILIYSG----------------WHVVSESWVSL-IRKVEEVTRWPRPTT--------------------------------------DSEKVVGRMR
Query: CKDGKVIAYASRQLKT
+ GKV+AYASRQLK+
Subjt: CKDGKVIAYASRQLKT
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| A0A5D3CLQ9 Ty3-gypsy retrotransposon protein | 7.7e-25 | 45.71 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRSLPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
LCIDY ELNKVT+KN YP RIDDLFD+ G VFSKID + ++ ++ D+PKT P FMDLMNR + DTFVIVF
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRSLPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIVF
Query: IDDILIYSGWHVVSESWVSLIRKVEEVTRWPRPTTDSE---------------KVVGRMRCKDGKVIAYASRQLK
IDDILIYS V E + K+E +T WPRP+T SE K +G + + G V+AYASRQLK
Subjt: IDDILIYSGWHVVSESWVSLIRKVEEVTRWPRPTTDSE---------------KVVGRMRCKDGKVIAYASRQLK
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| A0A5D3D066 Reverse transcriptase | 2.3e-24 | 46.45 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
LCIDY +LNKVTI+NKYP RIDDLFD+ G +FSKID RS ++ RE +I KT P FMDLMNR D FVIV
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
Query: FIDDILIYSG---------WHVVSESWVSL-IRKVEEVTRWPRPT--TDSEKVVGRMRCK----------DGKVIAYASRQLK
FIDDIL+YS HVVS VS+ +KVE V W RPT T++ K +C+ DG VIAYASRQLK
Subjt: FIDDILIYSG---------WHVVSESWVSL-IRKVEEVTRWPRPT--TDSEKVVGRMRCK----------DGKVIAYASRQLK
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| A0A5D3D4K2 Pol protein | 1.7e-24 | 41.28 | Show/hide |
Query: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
LCIDY ELNKVT+KN+YP RIDDLFD+ G VFSKID RS + R+ DIPKT FMDLMNR + DTFVIV
Subjt: LCIDYEELNKVTIKNKYP-SRIDDLFDRFTGEHVFSKIDPRS-LPSIEDREEDIPKTKIEITLWALRVHGDVVWFDQRPCAFMDLMNRFIQGVFDTFVIV
Query: FIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTRWPRPTTDSE-----------------KVVGR
FIDDILIYS W HVVS VS+ K+E VT WPRP+T SE K +G
Subjt: FIDDILIYSG------------------------------W--------HVVSESWVSL-IRKVEEVTRWPRPTTDSE-----------------KVVGR
Query: MRCKDGKVIAYASRQLKT
+ + GKV+AYASRQLK+
Subjt: MRCKDGKVIAYASRQLKT
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