; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009274 (gene) of Snake gourd v1 genome

Gene IDTan0009274
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPectin lyase-like superfamily protein
Genome locationLG02:43089149..43090523
RNA-Seq ExpressionTan0009274
SyntenyTan0009274
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927887.1 polygalacturonase-like [Cucurbita moschata]9.5e-11978.09Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        MFRHVDGVTISGGILDGQG GLWACKNSTKACPNGA+                                    GLKI+AS +SPNTDGIHVE SSNVTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS IGTGDDCISIGPGTS+MWIENIVC+PGHGISIGSLGKNLEEAGVQNITVKK  FSHTQNGVRIKTWGK SNGFA NILFQ I+MDNV+NPIIIDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF
        CPNH DCS+QASGV+ISNVTYQDIHGTS TQIAVKFDCSPTNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF

XP_022989658.1 polygalacturonase-like [Cucurbita maxima]2.8e-11576.33Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        MFRHV+GVTI+GGILDGQG GLW CKNSTK CPNGA+                                    GLKI+AS +SPNTDGIHVE SSNVTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS I TGDDCISIGPGT NMWIENIVC+PGHGISIGSLGKNLEEAGV+NITVKK  FSHTQNGVRIKTWG+ SNGFA NILFQ IVMDNV+NPIIIDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF
        CPNH DCSSQASGV+ISNVTYQDIHGTS TQIAVKFDCSPTNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF

XP_023530186.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]3.7e-10769.04Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        +FR VDGVTISGG+ DG+G+GLWACKNSTK CP+GA+                                    GLK+LAS NSPNTDGIHV+LSS+VTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NSKIGTGDDCISIGPGTSN+WIENIVC PGHGISIGSL K+LEEAGVQN+TVKK  FS TQNGVRIK WG+ SNGF +NILFQHIVMDNVQNPI+IDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CP+H  C  QASGV+IS+VTYQDIHGTS TQIAVKFDCSPTNPC  I++ED+KL+Y +Q A ATCSHV G A G VEP++C
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

XP_023531798.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]2.8e-11877.39Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        MFRHVDGVTISGGILDGQG GLWACKNSTKACPNGA+                                    GLKI+AS +SPNTDGIHVE SSNVTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS +GTGDDCISIGPGTS+MWIENIVC+PGHGISIGSLGKNLEEAGV+NITVKK  FSHTQNGVRIKTWGK SNGFA NILFQ I+MDNV+NPIIIDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF
        CPNH DCS+QASGV+ISNVTYQDIHGTS TQIAVKFDCSPTNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF

XP_038888714.1 polygalacturonase-like [Benincasa hispida]3.4e-10869.37Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKA--CPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVT
        +FRH+DGVTISGG LDG+GA LWACKNS+ +  CP GA+                                    GLK+LAS +SPNTDGIHV+LSS+VT
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKA--CPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVT

Query:  ILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQ
        ILNSKIGTGDDCISIGPGTSN+WIENIVC PGHGISIGSL K+L+E GVQNITVK   FS TQNGVRIK WGK SNGFARNILFQHIVMDNVQNPI+IDQ
Subjt:  ILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQ

Query:  NYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF
        NYCP+H  C  +ASGV+I++VTYQDIHGTS T+IA+KFDCSPTNPCV+I+LED++LTYMNQTAQATC++V GI AGLV+PTSCF
Subjt:  NYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF

TrEMBL top hitse value%identityAlignment
A0A5A7VKX0 Polygalacturonase4.4e-10668.66Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTK--ACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVT
        +FRHVDGVT+SGG LDG+GAGLWACKNS+    CP GA+                                    GLK+LAS NSPNTDGIHV++SSNV 
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTK--ACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVT

Query:  ILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQ
        +LNSKIGTGDDCISIGPGTSN+ IENIVC PGHGISIGSL K+++E GVQN+TVK   FS TQNGVRIK WGK SNGFARNILFQHIVMDNVQNPIIIDQ
Subjt:  ILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQ

Query:  NYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF
        NYCP+H  C  +ASGV+I++VTYQDIHGTS T+IAVKFDCSPTNPC  I+LE+++LTYMNQTAQATC++V GIAAGLV+PTSCF
Subjt:  NYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF

A0A6J1EHY1 polygalacturonase-like1.8e-10769.4Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        +FR VDGVTISGGI DG+G+GLWACKNSTK CP+GA+                                    GLK+LAS NSPNTDGIHV+LSS+VTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NSKIGTGDDCISIGPGTSN+WIENIVC PGHGISIGSL K+LEEAGVQN+TVKK  FS TQNGVRIK WG+ SNGF +NILFQHIVMDNVQNPI+IDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CP+H  C  QASGV+IS+VTYQ+IHGTS TQIAVKFDCSPTNPC +I++ED+KL+Y +Q A ATCSHV G A G VEP+SC
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

A0A6J1EIF8 polygalacturonase-like4.6e-11978.09Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        MFRHVDGVTISGGILDGQG GLWACKNSTKACPNGA+                                    GLKI+AS +SPNTDGIHVE SSNVTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS IGTGDDCISIGPGTS+MWIENIVC+PGHGISIGSLGKNLEEAGVQNITVKK  FSHTQNGVRIKTWGK SNGFA NILFQ I+MDNV+NPIIIDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF
        CPNH DCS+QASGV+ISNVTYQDIHGTS TQIAVKFDCSPTNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF

A0A6J1EJA0 polygalacturonase-like1.5e-10668.68Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        +FR VDGVTISGGI DG+G+GLWACKNSTK CP+GA+                                    GLK+LAS NSPNTDGIHV+LSS+V IL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NSKIGTGDDCISIGPGTSN+WIENIVC PGHGISIGSL K+L+EAGVQN+TVKK  FS TQNGVRIK WG+ SNGF +NILFQHIVMDNVQNPI+IDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CP+H DC  +ASGV+IS+VTYQDIHGTS TQIAVKFDCSPTNPC  I++ED+KL+Y +Q A ATCSH  G A G VEP+SC
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

A0A6J1JQZ3 polygalacturonase-like1.4e-11576.33Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        MFRHV+GVTI+GGILDGQG GLW CKNSTK CPNGA+                                    GLKI+AS +SPNTDGIHVE SSNVTIL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS I TGDDCISIGPGT NMWIENIVC+PGHGISIGSLGKNLEEAGV+NITVKK  FSHTQNGVRIKTWG+ SNGFA NILFQ IVMDNV+NPIIIDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF
        CPNH DCSSQASGV+ISNVTYQDIHGTS TQIAVKFDCSPTNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438609.0e-7251.25Show/hide
Query:  FRHVDGVTISGGILDGQGAGLWACKNS-TKACPNGA------------------------------------SGLKILASRNSPNTDGIHVELSSNVTIL
        F  V  V+I GGILD QG  LW CKN+    CP GA                                     G+K+ A  NSPNTDGIHVE S +V I 
Subjt:  FRHVDGVTISGGILDGQGAGLWACKNS-TKACPNGA------------------------------------SGLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS+IGTGDDCISIGPG++N++I+ I C PGHGISIGSLG+  EE GV N+TV    F  T NGVRIKTWGK SN FARNI+FQHI M  V+NPIIIDQ+Y
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        C  H  C  Q SGV++SNV Y+DIHGTS T++AV  DCS   PC  I ++D+ L  +++ AQA+C +  G A  +V  T C
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

P35336 Polygalacturonase6.3e-4949.52Show/hide
Query:  ASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGK
        AS L + A  NSPNTDGIHV  + N+ I +  IGTGDDCISI  G+  + + +I C PGHGISIGSLG    EA V ++ V       T NGVRIKTW +
Subjt:  ASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGK

Query:  SSNGFARNILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYM-NQTAQATCSHVEG
          +G A NI FQ++ M NV+NPIIIDQNYC     C  Q+S V++ NV YQ+I GT  + +A+ FDCS   PC  I LED+ L       A+A C++VE 
Subjt:  SSNGFARNILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYM-NQTAQATCSHVEG

Query:  IAAGLVEP
           G+V P
Subjt:  IAAGLVEP

P48979 Polygalacturonase1.2e-9559.79Show/hide
Query:  FRHVDGVTISGGILDGQGAGLWACKN-STKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        F HV+GVTISGGILDGQG  LWACK    ++CP+GA+                                    G+++  S NSPNTDGIHV++SS VTIL
Subjt:  FRHVDGVTISGGILDGQGAGLWACKN-STKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NSKI TGDDC+SIGPGTSN+WIE + C PGHGISIGSLGK  EEAGVQN+TVK  +FS TQNG+RIK+WG+ S GFARNILFQH  M NV+NPI+IDQ+Y
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CP++  C  Q SGV+IS+VTY+DIHGTS T++AVKFDCSP +PC +I+LED+KLTY NQ A+++CSH +G   G+V+PTSC
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

P49063 Exopolygalacturonase clone GBGA4832.2e-4947.09Show/hide
Query:  CKNSTKACPNGASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHT
        CKN T       S + I A   S NTDGIH+  S+ V ++ +KI TGDDC+SIG GT N+ +EN+ C PGHGISIGSLG+   E  V+ +TV+K    +T
Subjt:  CKNSTKACPNGASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHT

Query:  QNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQ-
         NGVRIKTW  S  G A NILF+ I MDNV  P++IDQ YCP  +  +   S V++S+VT + I GTS T++AVK  CS   PC  I L DI L +  + 
Subjt:  QNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQ-

Query:  -TAQATCSHVEGIAAGLVEPTSC
          A + CS+++ I +G + P +C
Subjt:  -TAQATCSHVEGIAAGLVEPTSC

Q6H9K0 Exopolygalacturonase (Fragment)4.7e-5242.4Show/hide
Query:  FRHVDGVTISG-GILDGQGAGLWACKNSTK--ACPNGASGLK------------------------------------ILASRNSPNTDGIHVELSSNVT
        F  +DG+T+SG G LDGQG   WA  N  K   C + A  L+                                    + A   S NTDGIHV +S  VT
Subjt:  FRHVDGVTISG-GILDGQGAGLWACKNSTK--ACPNGASGLK------------------------------------ILASRNSPNTDGIHVELSSNVT

Query:  ILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQ
        I N+KI TGDDCISIGPG+ N+ I  + C PGHGISIGSLG+   E  V+ ITVK  +FS T NGVR+KTW  S  G A ++ FQ + M+NVQNP+I+DQ
Subjt:  ILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQ

Query:  NYCPNHNDCSSQA-SGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQ--TAQATCSHVEGIAAGLVEP
         YCP +  CS QA S +++SN+ + +I GTS  ++AV   CS   PC  +++ +I L+Y      A +TCS+V+   +G   P
Subjt:  NYCPNHNDCSSQA-SGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQ--TAQATCSHVEGIAAGLVEP

Arabidopsis top hitse value%identityAlignment
AT2G43860.1 Pectin lyase-like superfamily protein6.4e-7351.25Show/hide
Query:  FRHVDGVTISGGILDGQGAGLWACKNS-TKACPNGA------------------------------------SGLKILASRNSPNTDGIHVELSSNVTIL
        F  V  V+I GGILD QG  LW CKN+    CP GA                                     G+K+ A  NSPNTDGIHVE S +V I 
Subjt:  FRHVDGVTISGGILDGQGAGLWACKNS-TKACPNGA------------------------------------SGLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NS+IGTGDDCISIGPG++N++I+ I C PGHGISIGSLG+  EE GV N+TV    F  T NGVRIKTWGK SN FARNI+FQHI M  V+NPIIIDQ+Y
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        C  H  C  Q SGV++SNV Y+DIHGTS T++AV  DCS   PC  I ++D+ L  +++ AQA+C +  G A  +V  T C
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

AT2G43870.1 Pectin lyase-like superfamily protein7.1e-8854.87Show/hide
Query:  FRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTILN
        F+H+DG+T+ GG+LD +GA LW CK S K CP+GA+                                    G+K+LA+ NSPNTDGIHV+ SS+V+I N
Subjt:  FRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTILN

Query:  SKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNYC
        +KI TGDDC+SIGPGT+ +WIEN+ C PGHGISIGSLGK+  E+GVQN+TVK  +F+ T NGVRIK+W + S+GFA+NI FQH VM+NV+NPIIIDQNYC
Subjt:  SKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNYC

Query:  PNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEP
        P+H DC  Q SG++IS+V + DIHGTS T++ VK DCS   PC  IRLED+KLTY N+ A + C+H  GI AG  +P
Subjt:  PNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEP

AT2G43880.1 Pectin lyase-like superfamily protein9.3e-7246.62Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGA-------------SGLKILASRN-----------------------SPNTDGIHVELSSNVTIL
        +F  V+ +++ GG +D +GAG W+C+     CP GA             SGL    S+N                       SPNTDGIHV+ SS VTI 
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGA-------------SGLKILASRN-----------------------SPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
           I TGDDCI++  G+ N+WIE + C PGHGISIGSLG    E GVQN+TV  + F+ TQNGVRIKTW + S GF  N++F++++M+NV+NP+IIDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CPN   C  Q+SGV+IS VT+ +I GTS T IA+K DCS +N C  +RL+DIKLTYM +++ + C +  G A+G++ P +C
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

AT2G43890.1 Pectin lyase-like superfamily protein4.0e-7549.11Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGA-------------SGL-----------------------KILASRNSPNTDGIHVELSSNVTIL
        +F  V+ ++I GG LD +GA  WAC+ S K+CP GA             SGL                       K++A   SPNTDG+HV+ S+ VT+ 
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGA-------------SGL-----------------------KILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        +    TGDDCISIGPGT N+++  + C PGHGISIGSLG++  EAGV+NIT+  + FS + NGVRIKTW + S GF RN+LFQ+++M NVQNPII+DQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CP++  C  Q SGV+IS V Y++I GTS TQ A+ FDCS +NPC  IRL DIKLT+  ++A +TC +++G+ AG+V P  C
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC

AT3G59850.1 Pectin lyase-like superfamily protein4.9e-8954.45Show/hide
Query:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL
        +F+H+DG+++ GG+LD QGA LW+CK S K CP+GA+                                    G+K+ A  NSPNTDGIHV+ SS V+IL
Subjt:  MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------------------GLKILASRNSPNTDGIHVELSSNVTIL

Query:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY
        NSKI TGDDC+SIGPGT+ +WIEN+ C PGHGISIGSLGK   E GVQNITVK  +F+ T+NGVRIK+W + SNGFA+NI FQH VM+NVQNPI+IDQNY
Subjt:  NSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNY

Query:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC
        CP + +C +Q SG++IS+V + DIHGTS T++ VK DCS   PC  IR++D+KLTY N+ A   CSH  G  AG   P SC
Subjt:  CPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGACACGTTGATGGAGTTACCATATCAGGTGGAATTCTTGATGGTCAAGGAGCTGGTTTATGGGCTTGTAAAAACTCAACCAAAGCTTGTCCGAATGGAGCTTC
GGGACTTAAAATCTTAGCCTCTAGAAATAGCCCCAACACGGATGGTATTCATGTAGAACTATCATCTAATGTTACCATACTAAATTCTAAGATAGGCACCGGGGATGATT
GTATATCCATTGGTCCTGGTACCTCCAATATGTGGATTGAGAATATTGTTTGTAGGCCTGGTCACGGAATAAGCATTGGAAGTCTAGGAAAGAACCTTGAAGAGGCTGGA
GTGCAAAATATAACTGTGAAAAAAACTTCATTTTCACACACTCAAAATGGGGTAAGAATCAAAACATGGGGCAAGTCAAGCAATGGATTTGCTAGGAACATTCTCTTCCA
ACATATTGTAATGGACAATGTTCAAAATCCAATTATTATCGATCAAAATTATTGTCCAAACCACAATGATTGTTCGAGCCAGGCTTCTGGAGTCAGAATTAGTAATGTGA
CATATCAAGACATTCATGGAACATCAGTCACCCAAATTGCAGTCAAATTCGATTGCAGTCCAACAAATCCATGTGTTCAAATAAGATTGGAGGACATAAAGCTTACTTAT
ATGAATCAAACAGCCCAAGCGACATGTAGCCATGTAGAAGGAATTGCTGCTGGTCTCGTTGAGCCCACTAGTTGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGACACGTTGATGGAGTTACCATATCAGGTGGAATTCTTGATGGTCAAGGAGCTGGTTTATGGGCTTGTAAAAACTCAACCAAAGCTTGTCCGAATGGAGCTTC
GGGACTTAAAATCTTAGCCTCTAGAAATAGCCCCAACACGGATGGTATTCATGTAGAACTATCATCTAATGTTACCATACTAAATTCTAAGATAGGCACCGGGGATGATT
GTATATCCATTGGTCCTGGTACCTCCAATATGTGGATTGAGAATATTGTTTGTAGGCCTGGTCACGGAATAAGCATTGGAAGTCTAGGAAAGAACCTTGAAGAGGCTGGA
GTGCAAAATATAACTGTGAAAAAAACTTCATTTTCACACACTCAAAATGGGGTAAGAATCAAAACATGGGGCAAGTCAAGCAATGGATTTGCTAGGAACATTCTCTTCCA
ACATATTGTAATGGACAATGTTCAAAATCCAATTATTATCGATCAAAATTATTGTCCAAACCACAATGATTGTTCGAGCCAGGCTTCTGGAGTCAGAATTAGTAATGTGA
CATATCAAGACATTCATGGAACATCAGTCACCCAAATTGCAGTCAAATTCGATTGCAGTCCAACAAATCCATGTGTTCAAATAAGATTGGAGGACATAAAGCTTACTTAT
ATGAATCAAACAGCCCAAGCGACATGTAGCCATGTAGAAGGAATTGCTGCTGGTCTCGTTGAGCCCACTAGTTGCTTCTAA
Protein sequenceShow/hide protein sequence
MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAG
VQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTY
MNQTAQATCSHVEGIAAGLVEPTSCF