CuGenDBv2

Gene ID	Tan0009363
Organism	Trichosanthes anguina (Snake gourd v1)
Description	COX assembly mitochondrial protein
Genome location	LG11:2708302..2711263
RNA-Seq Expression	Tan0009363
Synteny	Tan0009363
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]

7.3e-37

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKA+KECD YAS+YAECA+G+TLSVVFKCRNQAKELNNCLH YTND VLEEMKREYALQ +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

XP_004141503.1 uncharacterized protein DDB_G0275933 [Cucumis sativus]

1.9e-37

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKALKECD YAS+YAECA+G+TLSVVFKCRNQAKELNNCLH YTND++L+EMKREYALQQ+GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]

1.9e-37

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKALKECD YAS+YAECA+G+TLSV+FKCRNQAKELNNCLHLYTND+VL+EMKREYALQ +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

XP_022993759.1 uncharacterized protein DDB_G0275933 [Cucurbita maxima]

7.3e-37

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKA+KECD YAS+YAECA+G+TLSVVFKCRNQAKELNNCLH YTND VLEEMKREYALQ +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

XP_038889684.1 uncharacterized protein DDB_G0275933 [Benincasa hispida]

2.8e-36

86.52

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKALKECD +AS+YAECA+G+TLSVVFKCR QAKELNNCLHLYTN++VLEEMKREYALQ +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX6 COX assembly mitochondrial protein

9.3e-38

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKALKECD YAS+YAECA+G+TLSVVFKCRNQAKELNNCLH YTND++L+EMKREYALQQ+GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

A0A1S3CA82 COX assembly mitochondrial protein

9.3e-38

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKALKECD YAS+YAECA+G+TLSV+FKCRNQAKELNNCLHLYTND+VL+EMKREYALQ +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

A0A6J1BW91 COX assembly mitochondrial protein

2.5e-35

86.36

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGK
        MGY+Q+ARENHVKKKVEEALRSKMKQKALKECD YASRYAECA+G+TLSVV+KCR+QAKELN+CLH YTND VLEEMKR+YALQQ+GK
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGK

A0A6J1FIP8 COX assembly mitochondrial protein

2.3e-36

86.52

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKA+KECD YAS+YAECA+G+TLSVVFKCRNQAKELNNCLH YTND VLEEMKREYA Q +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

A0A6J1K100 COX assembly mitochondrial protein

3.5e-37

87.64

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Query:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP
        MGY+Q+ARENHVKKKVEEALRSKMKQKA+KECD YAS+YAECA+G+TLSVVFKCRNQAKELNNCLH YTND VLEEMKREYALQ +GKP
Subjt:  MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

SwissProt top hits

e value

%identity

Alignment

Q552P9 Uncharacterized protein DDB_G0275933

2.2e-07

40.91

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Query:  VEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREY
        V+  LR K+K ++LKEC  + + +A+C+  K +SVV++CR   + + NCL  YT    L  MKRE+
Subjt:  VEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like

5.4e-30

70.93

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Query:  YLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGK
        Y++ ARENHVKKKVEEALRSKMK KAL ECD Y S+YA+CA G+T SVV+ CR QA+ELN CLH +TND VLEEMKR Y +Q+ GK
Subjt:  YLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGK

Sequences

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CDS sequence

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ATGGGTTACTTACAGGATGCTAGAGAGAATCACGTGAAGAAGAAAGTAGAGGAAGCTTTGCGAAGCAAAATGAAGCAGAAGGCGTTGAAGGAGTGCGATCTGTACGCTTC
GAGATATGCTGAATGCGCCCACGGCAAAACATTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCTATACACTAACGACGCCGTGT
TGGAAGAGATGAAGCGGGAGTACGCACTGCAACAAAATGGGAAGCCGTGA

mRNA sequence

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TTACGATTAGGGTTTAGATTCCAACAAATTTTTAAAAGAAACAAAGAGAAACAGCTAAAAACTGTGGACTGAAATTGGTACCACCGGAGTTGGCTTCGAACGTTCTGCTT
CCAAAGAAACCAAAGGGCATTTGACTGCAAATTTCTGTGCTTCTATTGCTTTCTGAGATGGGTTACTTACAGGATGCTAGAGAGAATCACGTGAAGAAGAAAGTAGAGGA
AGCTTTGCGAAGCAAAATGAAGCAGAAGGCGTTGAAGGAGTGCGATCTGTACGCTTCGAGATATGCTGAATGCGCCCACGGCAAAACATTATCCGTCGTTTTCAAGTGTC
GCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCTATACACTAACGACGCCGTGTTGGAAGAGATGAAGCGGGAGTACGCACTGCAACAAAATGGGAAGCCGTGAGGA
AGAGTATAACACATCATTCAATGAGAGAACTAAAGAGTACTGTTATGGATCATTCTCAGGTGCACTTTCAGGTGATGTTGTTCGTCACTTGAAGTTGAGGCTTATTGATA
TTAGTAAGAACTGAATGAAAGCTGAGGCTTTTTGGATTTTCGATGTGGATAAGCAAAGGAATTCTGGTTTTTTGCATAAGAATGGTCTTTGATCTCTTTATGTATAAATT
TCAGAGCCATTATTCTTTGTGATATCTATAATCTTTACCTTTTGCAGGCAAATCTTTACCGGGAATGAGTTGCCTTCGAGAATATAATTCTAGCCAAATACTAAGGGTTT
GTTTGGTATGCAATCCGGATTTTGTTTTATGTTTTCGGATTCACTGAATTCAGTGAATATGTGTTTGGCAGATGTGTTTTCGGATTCTGG

Protein sequence

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MGYLQDARENHVKKKVEEALRSKMKQKALKECDLYASRYAECAHGKTLSVVFKCRNQAKELNNCLHLYTNDAVLEEMKREYALQQNGKP

Tan0009363 (gene) of Snake gourd v1 genome