| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 7.5e-140 | 70.62 | Show/hide |
Query: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
HINL+RI +LVK+GLL++L++ SL CESCLEGKMT RPF+GKGYRA EPLELIH DLCGPMNVKARGG+EYFISFIDDYS YGY+YLM KSE EKFK
Subjt: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
Query: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
E+KTEVENLL K IK LRSDRGGEYMD FQDYMIEHGI QLSAPG PQQNGVS+RRNRTLLDMVRSMMSYA+LP SFWGYA+ETAV ILN V SKSV
Subjt: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
Query: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
E PFELW GRK SL HFR P T K KLEPRS+LC FV YPKETRGG F+DP++NRV VSTN TF EEDH+R+H PRSK+VL+E STRV
Subjt: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
Query: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
D S+ V + ++S Q SQ LRMPRRSGRVV QP RY+GL ETQVV DD EDPL+Y + + K
Subjt: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 7.5e-140 | 70.62 | Show/hide |
Query: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
HINL+RI +LVK+GLL++L++ SL CESCLEGKMT RPF+GKGYRA EPLELIH DLCGPMNVKARGG+EYFISFIDDYS YGY+YLM KSE EKFK
Subjt: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
Query: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
E+KTEVENLL K IK LRSDRGGEYMD FQDYMIEHGI QLSAPG PQQNGVS+RRNRTLLDMVRSMMSYA+LP SFWGYA+ETAV ILN V SKSV
Subjt: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
Query: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
E PFELW GRK SL HFR P T K KLEPRS+LC FV YPKETRGG F+DP++NRV VSTN TF EEDH+R+H PRSK+VL+E STRV
Subjt: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
Query: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
D S+ V + ++S Q SQ LRMPRRSGRVV QP RY+GL ETQVV DD EDPL+Y + + K
Subjt: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa] | 5.7e-140 | 59.96 | Show/hide |
Query: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
++GQ+ EA+VA R FH+GST K + SS K +K K K + AAA K+ K CF+ N+ H KR+ P HINLNRIE
Subjt: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
Query: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
+LVK+G+LSELEENSL +CESCLEGKMT RPF+GKG+RA EPLEL+H DLCGPMNVKARG +EYFI+F DDYS YGY+YLM KSE EKFKE+K EVEN
Subjt: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
Query: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
L KTIKT RSDRGGEYMD +FQ+Y++E I QLSAPG PQQNGVS+RRNRTLLDMVRSM+SYA LP+SFWGYA++TAV ILN V SKSV E P +LW+
Subjt: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
Query: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLN----EMDGTSTRVADGA
GRK SLRHFR +KLEPRSKLCLFV YPK TRGGYFYD KDN+V V TN TF E+DHIR+H PRSKIVLN E+ STRV + +
Subjt: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLN----EMDGTSTRVADGA
Query: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
S T VV SS++ + Q LR PRRSGRV P RYM L ET V D + EDPLT+ + + + K
Subjt: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| TYJ96910.1 gag/pol protein [Cucumis melo var. makuwa] | 7.7e-145 | 57.94 | Show/hide |
Query: TVIFDNLQTFQSLVQTRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFPS----
T + + LQTF+SL++ +GQ+ EA+VA R FH+GST K + SS K +K K + KV+ AAA K+ K F+CN+ H KR+ P
Subjt: TVIFDNLQTFQSLVQTRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFPS----
Query: -----------------------------HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYE
HINLNRIE+LV++GLLSELEEN L VCESCLEGKMT RPF+GKG+RA EPLEL+H DLCGPMNVKARGG+E
Subjt: -----------------------------HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYE
Query: YFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMS
YFI+F DDYS YGY+YLM KSE EKFKE+K EVEN L KTIKT RSDRGGEYMD +FQ+Y++E GI QLSAPG PQQNGVS+RRN+TLLDMV SMMS
Subjt: YFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMS
Query: YARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNV
YA LP+SFWGYA++TAV ILN V SKSV E P +LW+GRK SL HFR P + K KLEPRSKLCLFV Y K +RGGYFYDPKDN+V+VSTN
Subjt: YARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNV
Query: TFFEEDHIRDHLPRSKIVLNEMDG----TSTRVADGASTSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQ
TF EEDHIR+H PRSKIVLNE+ STRV + S TSVV SS++ + Q LR PRRSGRV P RYM L ET V D + EDPLT+ + +
Subjt: TFFEEDHIRDHLPRSKIVLNEMDG----TSTRVADGASTSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQ
Query: TLTK
+ K
Subjt: TLTK
|
|
| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-142 | 60.6 | Show/hide |
Query: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
++GQ+ EA+VA R FH+GST K + SS K +K K K + AAA K+ K CF+ N+ H KR+ P HINLNRIE
Subjt: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
Query: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
+LVK+G+LSELEENSL +CESCLEGKMT RPF+GKG+RA EPLEL+H DLCGPMNVKARG +EYFI+F DDYS YGY+YLM KSE EKFKE+K EVEN
Subjt: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
Query: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
L KTIKT RSDRGGEYMD +FQ+Y++E I QLSAPG PQQNGVS+RRNRTLLDMVRSM+SYA LP+SFWGYA++TAV ILN V SKSV E P +LW+
Subjt: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
Query: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMD----GTSTRVADGA
GRK SLRHFR +KLEPRSKLCLFV YPK TRGGYFYDPKDN+V VSTN TF EEDHIR+H PRSKIVLNE+ STRV +
Subjt: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMD----GTSTRVADGA
Query: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
S T VV SS++ + Q LR PRRSGRV P RYM L ET V D + EDPLT+ + + + K
Subjt: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 3.6e-140 | 70.62 | Show/hide |
Query: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
HINL+RI +LVK+GLL++L++ SL CESCLEGKMT RPF+GKGYRA EPLELIH DLCGPMNVKARGG+EYFISFIDDYS YGY+YLM KSE EKFK
Subjt: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
Query: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
E+KTEVENLL K IK LRSDRGGEYMD FQDYMIEHGI QLSAPG PQQNGVS+RRNRTLLDMVRSMMSYA+LP SFWGYA+ETAV ILN V SKSV
Subjt: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
Query: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
E PFELW GRK SL HFR P T K KLEPRS+LC FV YPKETRGG F+DP++NRV VSTN TF EEDH+R+H PRSK+VL+E STRV
Subjt: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
Query: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
D S+ V + ++S Q SQ LRMPRRSGRVV QP RY+GL ETQVV DD EDPL+Y + + K
Subjt: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| A0A5A7UYX7 Gag/pol protein | 2.8e-140 | 59.96 | Show/hide |
Query: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
++GQ+ EA+VA R FH+GST K + SS K +K K K + AAA K+ K CF+ N+ H KR+ P HINLNRIE
Subjt: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
Query: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
+LVK+G+LSELEENSL +CESCLEGKMT RPF+GKG+RA EPLEL+H DLCGPMNVKARG +EYFI+F DDYS YGY+YLM KSE EKFKE+K EVEN
Subjt: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
Query: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
L KTIKT RSDRGGEYMD +FQ+Y++E I QLSAPG PQQNGVS+RRNRTLLDMVRSM+SYA LP+SFWGYA++TAV ILN V SKSV E P +LW+
Subjt: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
Query: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLN----EMDGTSTRVADGA
GRK SLRHFR +KLEPRSKLCLFV YPK TRGGYFYD KDN+V V TN TF E+DHIR+H PRSKIVLN E+ STRV + +
Subjt: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLN----EMDGTSTRVADGA
Query: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
S T VV SS++ + Q LR PRRSGRV P RYM L ET V D + EDPLT+ + + + K
Subjt: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| A0A5D3BAN6 Gag/pol protein | 3.7e-145 | 57.94 | Show/hide |
Query: TVIFDNLQTFQSLVQTRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFPS----
T + + LQTF+SL++ +GQ+ EA+VA R FH+GST K + SS K +K K + KV+ AAA K+ K F+CN+ H KR+ P
Subjt: TVIFDNLQTFQSLVQTRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFPS----
Query: -----------------------------HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYE
HINLNRIE+LV++GLLSELEEN L VCESCLEGKMT RPF+GKG+RA EPLEL+H DLCGPMNVKARGG+E
Subjt: -----------------------------HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYE
Query: YFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMS
YFI+F DDYS YGY+YLM KSE EKFKE+K EVEN L KTIKT RSDRGGEYMD +FQ+Y++E GI QLSAPG PQQNGVS+RRN+TLLDMV SMMS
Subjt: YFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMS
Query: YARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNV
YA LP+SFWGYA++TAV ILN V SKSV E P +LW+GRK SL HFR P + K KLEPRSKLCLFV Y K +RGGYFYDPKDN+V+VSTN
Subjt: YARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNV
Query: TFFEEDHIRDHLPRSKIVLNEMDG----TSTRVADGASTSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQ
TF EEDHIR+H PRSKIVLNE+ STRV + S TSVV SS++ + Q LR PRRSGRV P RYM L ET V D + EDPLT+ + +
Subjt: TFFEEDHIRDHLPRSKIVLNEMDG----TSTRVADGASTSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQ
Query: TLTK
+ K
Subjt: TLTK
|
|
| A0A5D3BHG7 Gag/pol protein | 6.0e-143 | 60.6 | Show/hide |
Query: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
++GQ+ EA+VA R FH+GST K + SS K +K K K + AAA K+ K CF+ N+ H KR+ P HINLNRIE
Subjt: TRGQEVEASVA--LRPFHKGSTFRIKFVDSSGPKGKKEKLK---EVKVDRAAALKGKEIKDVARKCFYCNEGEHLKRSFP-----------SHINLNRIE
Query: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
+LVK+G+LSELEENSL +CESCLEGKMT RPF+GKG+RA EPLEL+H DLCGPMNVKARG +EYFI+F DDYS YGY+YLM KSE EKFKE+K EVEN
Subjt: KLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFKEFKTEVEN
Query: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
L KTIKT RSDRGGEYMD +FQ+Y++E I QLSAPG PQQNGVS+RRNRTLLDMVRSM+SYA LP+SFWGYA++TAV ILN V SKSV E P +LW+
Subjt: LLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVCERPFELWH
Query: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMD----GTSTRVADGA
GRK SLRHFR +KLEPRSKLCLFV YPK TRGGYFYDPKDN+V VSTN TF EEDHIR+H PRSKIVLNE+ STRV +
Subjt: GRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMD----GTSTRVADGA
Query: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
S T VV SS++ + Q LR PRRSGRV P RYM L ET V D + EDPLT+ + + + K
Subjt: STSTSVVDPSSSSQV-RSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| A0A5D3BUN8 Gag/pol protein | 3.6e-140 | 70.62 | Show/hide |
Query: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
HINL+RI +LVK+GLL++L++ SL CESCLEGKMT RPF+GKGYRA EPLELIH DLCGPMNVKARGG+EYFISFIDDYS YGY+YLM KSE EKFK
Subjt: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
Query: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
E+KTEVENLL K IK LRSDRGGEYMD FQDYMIEHGI QLSAPG PQQNGVS+RRNRTLLDMVRSMMSYA+LP SFWGYA+ETAV ILN V SKSV
Subjt: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
Query: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
E PFELW GRK SL HFR P T K KLEPRS+LC FV YPKETRGG F+DP++NRV VSTN TF EEDH+R+H PRSK+VL+E STRV
Subjt: ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTRV
Query: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
D S+ V + ++S Q SQ LRMPRRSGRVV QP RY+GL ETQVV DD EDPL+Y + + K
Subjt: ADGASTSTSVVDPSSSSQVR-SQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECEDPLTYVRQWQTLTK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.9e-35 | 27.05 | Show/hide |
Query: INLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRAN--EPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKF
+ + R LL+ L E S +CE CL GK PF + + PL ++H D+CGP+ YF+ F+D ++ Y YL+ KS+ F F
Subjt: INLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRAN--EPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKF
Query: KEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSV
++F + E + L D G EY+ E + + ++ GI++ L+ P PQ NGVS+R RT+ + R+M+S A+L SFWG A+ TA ++N + S+++
Subjt: KEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSV
Query: CE---RPFELWHGRKTSLRHFR-FGDVRPMCWCQTRRKR-KLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMD
+ P+E+WH +K L+H R FG + + K+ K + +S +FV Y E G +D + + IV+ +V E + + + + V + D
Subjt: CE---RPFELWHGRKTSLRHFR-FGDVRPMCWCQTRRKR-KLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMD
Query: GTSTRVADGASTSTSVVD---PSSSSQVRSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECED
+ + + S ++ P+ S + + + + P + +T+ EC++
Subjt: GTSTRVADGASTSTSVVD---PSSSSQVRSQELRMPRRSGRVVRQPERYMGLAETQVVTVDDECED
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-51 | 33.52 | Show/hide |
Query: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
H++ ++ L K L+S + ++ C+ CL GK F R L+L++ D+CGPM +++ GG +YF++FIDD S ++Y++ K + F+ F+
Subjt: HINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEKSETFEKFK
Query: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
+F VE G+ +K LRSD GGEY EF++Y HGI + + PG PQ NGV++R NRT+++ VRSM+ A+LP SFWG A++TA ++N S +
Subjt: EFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILNTVLSKSVC
Query: -ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTR
E P +W ++ S H + R ++ KL+ +S C+F+ Y E G +DP +VI S +V F E +R S+ V N G
Subjt: -ERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFEEDHIRDHLPRSKIVLNEMDGTSTR
Query: VADGASTSTSVVDPSSSSQVRSQELRMPRRSGRVVRQPERY-MGLAETQVVTVDDECEDPL
STS + S++ S++ P G V+ Q E+ G+ E + T +E PL
Subjt: VADGASTSTSVVDPSSSSQVRSQELRMPRRSGRVVRQPERY-MGLAETQVVTVDDECEDPL
|
|
| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 4.0e-19 | 27.75 | Show/hide |
Query: HINLNRIEKLVKSGLLSELEEN-------SLLVCESCLEGKMT----IRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLM
H N I+K +K ++ L+E+ S C CL GK T I+ K + EP + +H D+ GP++ + YFISF D+ + + ++Y +
Subjt: HINLNRIEKLVKSGLLSELEEN-------SLLVCESCLEGKMT----IRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLM
Query: HEKSE--TFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETA
H++ E F ++N + ++ DRG EY + + GIT + + +GV++R NRTLL+ R+++ + LP+ W A+E +
Subjt: HEKSE--TFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETA
Query: VCILNTVLS
I N+++S
Subjt: VCILNTVLS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-29 | 27.11 | Show/hide |
Query: HLKRSFPSHINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEK
H + P+ LN + +L+ + L C CL K PFS + PLE I+ D+ + + Y Y++ F+D ++ Y ++Y + +K
Subjt: HLKRSFPSHINLNRIEKLVKSGLLSELEENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGYIYLMHEK
Query: SETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILN
S+ E F FK +EN I T SD GGE++ +Y +HGI+ S P P+ NG+S+R++R +++ +++S+A +P ++W YA AV ++N
Subjt: SETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAMETAVCILN
Query: TVLSKSV-CERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFE
+ + + E PF+ G + R W + + KL+ +S+ C+F+ Y + +R+ +S +V F E
Subjt: TVLSKSV-CERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFE
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-30 | 28.18 | Show/hide |
Query: CNEGEHLK-RSFPSHINLNRIEKLVKSGLLSELE-ENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGY
C++ H S H +L + ++ + L L + LL C C K PFS +++PLE I+ D+ + + Y Y++ F+D ++ Y +
Subjt: CNEGEHLK-RSFPSHINLNRIEKLVKSGLLSELE-ENSLLVCESCLEGKMTIRPFSGKGYRANEPLELIHYDLCGPMNVKARGGYEYFISFIDDYSSYGY
Query: IYLMHEKSETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAME
+Y + +KS+ + F FK+ VEN I TL SD GGE++ +DY+ +HGI+ S P P+ NG+S+R++R +++M +++S+A +P ++W YA
Subjt: IYLMHEKSETFEKFKEFKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHGITFQLSAPGMPQQNGVSKRRNRTLLDMVRSMMSYARLPDSFWGYAME
Query: TAVCILNTVLSKSV-CERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFE
AV ++N + + + + PF+ G+ + + W + + KLE +SK C F+ Y R+ S +V F E
Subjt: TAVCILNTVLSKSV-CERPFELWHGRKTSLRHFRFGDVRPMCWCQTRRKRKLEPRSKLCLFVSYPKETRGGYFYDPKDNRVIVSTNVTFFE
|
|
