; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009415 (gene) of Snake gourd v1 genome

Gene IDTan0009415
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription initiation factor TFIID subunit 11 isoform X3
Genome locationLG11:13908148..13909343
RNA-Seq ExpressionTan0009415
SyntenyTan0009415
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579085.1 hypothetical protein SDJN03_23533, partial [Cucurbita argyrosperma subsp. sororia]3.0e-7587.05Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSST-AAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGE
        +K+GSGN+DEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS+ AAA RNPRPSQP   S SSSRPP IENLVVDGESQS+LG+
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSST-AAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGE

Query:  DLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEAD----GDDDDESNSSDEDFDDRRKERRKKKA
        DLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPS+EDDE D     DDD+E +SSDED DDR+KERRKKKA
Subjt:  DLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEAD----GDDDDESNSSDEDFDDRRKERRKKKA

KAG7016610.1 hypothetical protein SDJN02_21720, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-7789.47Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSST-AAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGE
        +K+GSGN+DEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS+ AAA RNPRPSQP   S SSSRPP IENLVVDGESQS+LG+
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSST-AAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGE

Query:  DLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA
        DLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPS+EDDE D DDDDE  NSSDED DDR+KERRKKKA
Subjt:  DLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA

XP_022939254.1 nucleolin [Cucurbita moschata]3.5e-7688.83Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED
        +K+ SGN+DEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS AAA RNPRPSQP   S SSSRPP IENLVVDGESQS+LG+D
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED

Query:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA
        LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPS+EDDE   DDD+E NSSDED DDR+KERRKKKA
Subjt:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA

XP_022993807.1 glucosidase 2 subunit beta [Cucurbita maxima]5.0e-7588.89Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED
        +K+GSGN+DEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS AAA RNPR SQP   S SSSRPP IENLVVDGESQS+LG+D
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED

Query:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA
        LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDA RLDPSPPS+EDDE D DDDDE  NSSDED DDR+KERRKKKA
Subjt:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA

XP_023550367.1 nucleolin [Cucurbita pepo subsp. pepo]1.7e-7588.36Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED
        +K+GSGN+DEQVEQLLQAAQDDLMLK SVDSHMSRVSPNYLDSDLDRRFQALRSRPSS AAA RNPRPSQ    S SSSRPP IENLVVDGESQS+LG+D
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED

Query:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA
        LAARFAALKASLPSSITPPPSSI NDVDSDDEEDEVEKLIQWAKDAARLDPSPPS+EDDE D DDDDE  NSSDED DDR+KERRKKKA
Subjt:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA

TrEMBL top hitse value%identityAlignment
A0A1S4E6L5 uncharacterized protein LOC1035028662.4e-6781.12Show/hide
Query:  MNSRKKIGSGNDD--EQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAA-PRNPRPSQPPLHSYSSSR-PPAIENLVVDGE
        M+SRKK G GNDD  EQ+EQLLQAAQDDL+LKL++DSHMSRVSPNYL SDLDRRFQALRSRPSSTAAA PRNPR S P + S SSSR PP IENLVVDGE
Subjt:  MNSRKKIGSGNDD--EQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAA-PRNPRPSQPPLHSYSSSR-PPAIENLVVDGE

Query:  SQSLLGEDLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA
        SQS+LG+DLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDAARLDPSPPS+EDDE     ++E  SSDED +DR KERRKKKA
Subjt:  SQSLLGEDLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA

A0A5D3CTC3 Transcription initiation factor TFIID subunit 11 isoform X31.4e-6781.63Show/hide
Query:  MNSRKKIGSGNDD--EQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAA-PRNPRPSQPPLHSYSSSR-PPAIENLVVDGE
        M+SRKK G GNDD  EQ+EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSSTAAA PRNPR S P + S SSSR PP IENLVVDGE
Subjt:  MNSRKKIGSGNDD--EQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAA-PRNPRPSQPPLHSYSSSR-PPAIENLVVDGE

Query:  SQSLLGEDLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA
        SQS+LG+DLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDAARLDPSPPS+EDDE     ++E  SSDED +DR KERRKKKA
Subjt:  SQSLLGEDLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA

A0A6J1CIG2 uncharacterized protein LOC1110118973.1e-7083.08Show/hide
Query:  MNSRKKI-GSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS-TAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQ
        M+ RKK  GSGNDDEQVEQLLQAAQDDLMLKL++DSHMSRVSPNYLDSDLDRRFQALRSRPSS  AAAPRNPRPS+  L     S+PPAIENL VDGESQ
Subjt:  MNSRKKI-GSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS-TAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQ

Query:  SLLGEDLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKAA
        S+LG+DLA RFAALKASLPSS  PPPSS+PNDVDS+DEEDEVEKLIQWAKDAARLDPSPPSD+DD+   D DDES+SSDED DDRRKERRKKKAA
Subjt:  SLLGEDLAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKAA

A0A6J1FGM0 nucleolin1.7e-7688.83Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED
        +K+ SGN+DEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS AAA RNPRPSQP   S SSSRPP IENLVVDGESQS+LG+D
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED

Query:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA
        LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPS+EDDE   DDD+E NSSDED DDR+KERRKKKA
Subjt:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKA

A0A6J1JTW4 glucosidase 2 subunit beta2.4e-7588.89Show/hide
Query:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED
        +K+GSGN+DEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSS AAA RNPR SQP   S SSSRPP IENLVVDGESQS+LG+D
Subjt:  KKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGED

Query:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA
        LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDA RLDPSPPS+EDDE D DDDDE  NSSDED DDR+KERRKKKA
Subjt:  LAARFAALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDES-NSSDEDFDDRRKERRKKKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24370.1 unknown protein2.1e-2345.03Show/hide
Query:  GNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGEDLAARF
        G ++++VEQLLQAAQD+++LKLSVDSH SR S +YLD DL  RF AL+S+        +  RP   P         P                EDL  RF
Subjt:  GNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGEDLAARF

Query:  AALKASLPSSITPP----PSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSS
        AALK SLPS+ +         I  D D   E+ EV+KLIQWA DAARLDPSP SD++   + D DDE++S+
Subjt:  AALKASLPSSITPP----PSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCAGAAAGAAGATAGGAAGCGGCAACGACGACGAACAAGTTGAGCAATTGCTGCAAGCGGCTCAGGACGATCTCATGCTGAAATTGAGCGTCGATTCCCACAT
GTCGCGTGTATCACCAAACTATCTCGATTCCGATCTCGATCGCCGATTCCAAGCCCTAAGATCGCGACCTTCCTCCACCGCCGCCGCTCCCCGCAATCCCCGCCCTTCTC
AGCCGCCGCTTCACTCCTATTCGTCGTCCAGGCCGCCGGCGATTGAAAACCTTGTCGTTGATGGCGAATCTCAGTCGCTTCTCGGTGAGGATCTCGCTGCTAGATTCGCT
GCTCTGAAGGCGTCTTTGCCTTCCTCGATTACTCCGCCTCCGTCGTCAATACCTAACGATGTTGATAGCGATGATGAAGAGGACGAGGTTGAGAAGTTGATTCAGTGGGC
TAAGGATGCCGCTCGTCTCGATCCTTCGCCTCCATCTGACGAAGACGATGAAGCCGATGGAGACGATGACGACGAATCGAATAGTTCCGATGAAGATTTCGACGATCGGA
GAAAAGAGCGTAGGAAGAAGAAGGCCGCGTGA
mRNA sequenceShow/hide mRNA sequence
GCGTTATTAACTCCTCCCAATTCCACCCAAGTCTTCAATCCAAACGGCCCTCATTAATGCCGTTACAAAGGTCTTTTGTGGAGTATAATGGTAATTTCACATCCAATTTA
CAATATCAATGGCTGAAATTGCCAAAATCGACAGATGAATTAGGAGAAGAAGAAGAACAGCAAAGTAGACCAGAAAAGAAATGAATTCCAGAAAGAAGATAGGAAGCGGC
AACGACGACGAACAAGTTGAGCAATTGCTGCAAGCGGCTCAGGACGATCTCATGCTGAAATTGAGCGTCGATTCCCACATGTCGCGTGTATCACCAAACTATCTCGATTC
CGATCTCGATCGCCGATTCCAAGCCCTAAGATCGCGACCTTCCTCCACCGCCGCCGCTCCCCGCAATCCCCGCCCTTCTCAGCCGCCGCTTCACTCCTATTCGTCGTCCA
GGCCGCCGGCGATTGAAAACCTTGTCGTTGATGGCGAATCTCAGTCGCTTCTCGGTGAGGATCTCGCTGCTAGATTCGCTGCTCTGAAGGCGTCTTTGCCTTCCTCGATT
ACTCCGCCTCCGTCGTCAATACCTAACGATGTTGATAGCGATGATGAAGAGGACGAGGTTGAGAAGTTGATTCAGTGGGCTAAGGATGCCGCTCGTCTCGATCCTTCGCC
TCCATCTGACGAAGACGATGAAGCCGATGGAGACGATGACGACGAATCGAATAGTTCCGATGAAGATTTCGACGATCGGAGAAAAGAGCGTAGGAAGAAGAAGGCCGCGT
GAGCGTTAATCCGCTGTATCCGCATTCGATTTACTGATTATTTGGGATTTAGAAATTCAAGATTCAAACAGTGGATGCTGTCCGGATTTTGGTTGAACTGGATCGCGAGA
AGGTAGGGTTCACCGGCACGGCGTCTGATTGCCATTTTCGCCGCCATTACAGTTCAAAACTCTGAATCTTCAAATAACATTTTCCGTTGCTTAATCGATTCTTCACTGTT
CTAATTTCATTTTTATCTCCCAACAGATAAACGATTGCATTATTTTAGTTAGGAATGTGGAGTTGGATATTAAAGAAATGCCGATTTCTTTCTTTATGTGGAGATGAAAT
GTTGAGTTTGTGGCATGTGTCCATCGAGATAAATCATTGGATGAGACGACACAATTAAACTATAACTATTGAATAAATTTGAGATTTTTTTTTTCG
Protein sequenceShow/hide protein sequence
MNSRKKIGSGNDDEQVEQLLQAAQDDLMLKLSVDSHMSRVSPNYLDSDLDRRFQALRSRPSSTAAAPRNPRPSQPPLHSYSSSRPPAIENLVVDGESQSLLGEDLAARFA
ALKASLPSSITPPPSSIPNDVDSDDEEDEVEKLIQWAKDAARLDPSPPSDEDDEADGDDDDESNSSDEDFDDRRKERRKKKAA