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Tan0009420 (gene) of Snake gourd v1 genome

Gene IDTan0009420
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG02:3552971..3553384
RNA-Seq ExpressionTan0009420
SyntenyTan0009420
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449396.1 PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo]2.1e-5987.59Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSYSEML+EL +LRVFET FGIDVKPDP+ELSSVY+SLFLQFDHDSSGTVDLDEFKAE KR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA
        MML MANG+G LPVQMVLEEGSFLMK VERET I AA
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA

XP_022135623.1 uncharacterized protein LOC111007532 [Momordica charantia]2.8e-5988.32Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAF AFIRDRFAHLDTNHDGLLSY+EML+ELQSLRVFE  FGIDVKPDPDELS+VY+SLFLQFDHDSSG VDLDEFKAE KR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA
        MMLA ANG+G LPVQMVLEEGSFLMK VERET IMAA
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA

XP_022930659.1 uncharacterized protein LOC111437060 [Cucurbita moschata]1.0e-5888.89Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAFGA I DRFAHLDTNHDGLLS+SEMLKELQSLRV E DFGIDVKPDPDELSSVY+S+FLQFD +SSGTVDLDEFKAENKR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM
        MMLAMANGIG LPVQMVLEEGSFLMK VERE  IM
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM

XP_022989004.1 uncharacterized protein LOC111486198 [Cucurbita maxima]4.2e-6090.37Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAFGAFI DRFAHLDTNHDGLLSYSEMLKELQSLRV E DFGIDVKPDPDELSSVY+S+FLQFD +SSGTVDLDEFKAENKR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM
        MMLAMANGIG LPVQMVLEEGSFLMK VERE  IM
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM

XP_023529816.1 uncharacterized protein LOC111792530 [Cucurbita pepo subsp. pepo]3.6e-5989.63Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAFGA I DRFAHLDTNHDGLLSYSEMLKELQSLRV E DFGIDVKPDPDELSSVY+S+FLQFD +SSGTVDLDEFKAENKR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM
        MMLAMANGIG LPVQMVLEEGSFLMK VERE  IM
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM

TrEMBL top hitse value%identityAlignment
A0A1S3BLY5 uncharacterized protein LOC1034912941.0e-5987.59Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSYSEML+EL +LRVFET FGIDVKPDP+ELSSVY+SLFLQFDHDSSGTVDLDEFKAE KR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA
        MML MANG+G LPVQMVLEEGSFLMK VERET I AA
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA

A0A5D3E445 Calcium-binding EF-hand family protein1.0e-5987.59Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSYSEML+EL +LRVFET FGIDVKPDP+ELSSVY+SLFLQFDHDSSGTVDLDEFKAE KR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA
        MML MANG+G LPVQMVLEEGSFLMK VERET I AA
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA

A0A6J1C5B4 uncharacterized protein LOC1110075321.3e-5988.32Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAF AFIRDRFAHLDTNHDGLLSY+EML+ELQSLRVFE  FGIDVKPDPDELS+VY+SLFLQFDHDSSG VDLDEFKAE KR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA
        MMLA ANG+G LPVQMVLEEGSFLMK VERET IMAA
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIMAA

A0A6J1ES35 uncharacterized protein LOC1114370605.1e-5988.89Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAFGA I DRFAHLDTNHDGLLS+SEMLKELQSLRV E DFGIDVKPDPDELSSVY+S+FLQFD +SSGTVDLDEFKAENKR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM
        MMLAMANGIG LPVQMVLEEGSFLMK VERE  IM
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM

A0A6J1JN55 uncharacterized protein LOC1114861982.1e-6090.37Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        MSVEILD +TIVNFVEDEAAFGAFI DRFAHLDTNHDGLLSYSEMLKELQSLRV E DFGIDVKPDPDELSSVY+S+FLQFD +SSGTVDLDEFKAENKR
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM
        MMLAMANGIG LPVQMVLEEGSFLMK VERE  IM
Subjt:  MMLAMANGIGVLPVQMVLEEGSFLMKVVERETGIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein9.6e-1031.25Show/hide
Query:  ILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKRMMLA
        ++   T++ F+ D  +F +   D F  LD + +G+LS SE+ + L ++   E+    +V P  DE  +VYN++F +F  D    +    F+     ++ A
Subjt:  ILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKRMMLA

Query:  MANGIGVLPVQMVLEEGSFLMKVVERET
        MA GIG  PV MV+     +MK V  E+
Subjt:  MANGIGVLPVQMVLEEGSFLMKVVERET

AT2G44310.1 Calcium-binding EF-hand family protein8.3e-3046.62Show/hide
Query:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR
        M V ++DGST+ +FV+DE  F   + +RFA LD N DG+LS SE+ K  +S+R+ E+ FG+DV    DEL+++Y+S+F +FD D SG+VDL+EF++E K+
Subjt:  MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKR

Query:  MMLAMANGIGVLPVQMVL--EEGSFLMKVVERE
        ++LA+A+G+G  P+ MVL  ++ +FL K  + E
Subjt:  MMLAMANGIGVLPVQMVL--EEGSFLMKVVERE

AT4G38810.2 Calcium-binding EF-hand family protein7.3e-1028.8Show/hide
Query:  EILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKRMML
        ++LDGS IV  VE+E  F  F+  +F  LD + DG LS +E+   +  +       G+  +    +   +Y+ +  +F H S   V   EFK     ++L
Subjt:  EILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKRMML

Query:  AMANGIGVLPVQMVLEEGSFLMKVV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGIGVLPVQMVLEEGSFLMKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAGATATTGGATGGTTCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCTTTCGGTGCCTTCATAAGAGACCGGTTTGCTCACCTCGACACCAATCATGA
TGGTCTCCTTTCCTATAGTGAGATGTTGAAGGAATTGCAGAGCCTCAGGGTCTTCGAGACCGATTTTGGGATCGATGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCT
ATAATTCTCTGTTTTTGCAGTTTGATCATGACTCGAGTGGAACGGTCGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCCATGGCTAATGGAATTGGA
GTCTTACCTGTTCAGATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGTTGTTGAGAGAGAAACCGGTATAATGGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAGATATTGGATGGTTCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCTTTCGGTGCCTTCATAAGAGACCGGTTTGCTCACCTCGACACCAATCATGA
TGGTCTCCTTTCCTATAGTGAGATGTTGAAGGAATTGCAGAGCCTCAGGGTCTTCGAGACCGATTTTGGGATCGATGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCT
ATAATTCTCTGTTTTTGCAGTTTGATCATGACTCGAGTGGAACGGTCGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCCATGGCTAATGGAATTGGA
GTCTTACCTGTTCAGATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGTTGTTGAGAGAGAAACCGGTATAATGGCTGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDGSTIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLKELQSLRVFETDFGIDVKPDPDELSSVYNSLFLQFDHDSSGTVDLDEFKAENKRMMLAMANGIG
VLPVQMVLEEGSFLMKVVERETGIMAA