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Tan0009428 (gene) of Snake gourd v1 genome

Gene IDTan0009428
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWD repeat containing protein
Genome locationLG09:63864137..63866651
RNA-Seq ExpressionTan0009428
SyntenyTan0009428
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4781.75Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN
        MAD RA L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAYMFASARKKDLGQMEND+AEKDL QLEND +EK SD EI EIPSTFM +TT IVTEN
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN

Query:  ISEDQQQEPFQWLVHGWREKIGFSKK
        ISEDQ Q+PF W+V GWREK G SKK
Subjt:  ISEDQQQEPFQWLVHGWREKIGFSKK

XP_004135711.1 uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]1.8e-3366.93Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDE-ISEIPSTFMENTTSIVTE
        M D RAPLPS SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+   Q+ENDQ            VEK SD E I+EIPST M +TT IVTE
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDE-ISEIPSTFMENTTSIVTE

Query:  NISEDQQQEPFQWLVHGWREKIGFSKK
        N+ EDQQQEP Q +V GWREK+GFS+K
Subjt:  NISEDQQQEPFQWLVHGWREKIGFSKK

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]1.6e-4580.16Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN
        MAD RA L S SSPPSL PND LPRRFKV+WRVLLISNFALSAYMFASARKKDLGQMEN++AEKDL QLEND +EK SD EI EIPSTFM +TT IVTEN
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN

Query:  ISEDQQQEPFQWLVHGWREKIGFSKK
        ISEDQ Q+PF W+V GWREK G SKK
Subjt:  ISEDQQQEPFQWLVHGWREKIGFSKK

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]4.2e-4680.16Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN
        MAD RA L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAYMFASARKKDLGQME+D+AEKDL QLEND +EK SD EI EIPSTFM +TT IVTEN
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN

Query:  ISEDQQQEPFQWLVHGWREKIGFSKK
        I EDQ Q+PF W+V GWREK G SKK
Subjt:  ISEDQQQEPFQWLVHGWREKIGFSKK

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]1.4e-4680.95Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN
        MAD RA L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAYMFASARKKDLGQMEND+AEKDL QLEND +EK SD EI EIPST M +TT IVTEN
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN

Query:  ISEDQQQEPFQWLVHGWREKIGFSKK
        ISEDQ Q+PF W+V GWREK G SKK
Subjt:  ISEDQQQEPFQWLVHGWREKIGFSKK

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein8.8e-3466.93Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDE-ISEIPSTFMENTTSIVTE
        M D RAPLPS SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+   Q+ENDQ            VEK SD E I+EIPST M +TT IVTE
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDE-ISEIPSTFMENTTSIVTE

Query:  NISEDQQQEPFQWLVHGWREKIGFSKK
        N+ EDQQQEP Q +V GWREK+GFS+K
Subjt:  NISEDQQQEPFQWLVHGWREKIGFSKK

A0A1S3BR82 uncharacterized protein LOC1034923202.2e-3264.57Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDE-ISEIPSTFMENTTSIVTE
        M  SR PLPS SS   LPPND LP+RFKV+WR+LLISNFALSAYMFASARK+   ++ENDQ            VEK SD E I+EIPST M +TT IVTE
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDE-ISEIPSTFMENTTSIVTE

Query:  NISEDQQQEPFQWLVHGWREKIGFSKK
        N+ EDQQQEP Q +V GWREK+GFS+K
Subjt:  NISEDQQQEPFQWLVHGWREKIGFSKK

A0A6J1D315 uncharacterized protein LOC1110165442.7e-3068.7Show/hide
Query:  MADSRAPLPSPSS-PPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEI-SEIPSTFMENTTSIVT
        M D RAPLPS SS PP LPPNDLLPRRFKVIWRVLLISNFAL+AYMFA+ARKKDLG+ME D             VEKHSD E+ + IPST M +TT+I  
Subjt:  MADSRAPLPSPSS-PPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEI-SEIPSTFMENTTSIVT

Query:  ENISEDQQQEPFQWL
        ENISED Q+EPFQW+
Subjt:  ENISEDQQQEPFQWL

A0A6J1EIP0 uncharacterized protein LOC1114337167.7e-4680.16Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN
        MAD RA L S SSPPSL PND LPRRFKV+WRVLLISNFALSAYMFASARKKDLGQMEN++AEKDL QLEND +EK SD EI EIPSTFM +TT IVTEN
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN

Query:  ISEDQQQEPFQWLVHGWREKIGFSKK
        ISEDQ Q+PF W+V GWREK G SKK
Subjt:  ISEDQQQEPFQWLVHGWREKIGFSKK

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X12.0e-4680.16Show/hide
Query:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN
        MAD RA L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAYMFASARKKDLGQME+D+AEKDL QLEND +EK SD EI EIPSTFM +TT IVTEN
Subjt:  MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTEN

Query:  ISEDQQQEPFQWLVHGWREKIGFSKK
        I EDQ Q+PF W+V GWREK G SKK
Subjt:  ISEDQQQEPFQWLVHGWREKIGFSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTCACGAGCGCCGCTGCCATCTCCATCTTCCCCACCGTCTTTACCTCCCAATGATTTGCTACCCAGACGCTTCAAGGTCATATGGCGCGTTCTATTGATCTC
CAATTTCGCCCTTTCAGCCTATATGTTTGCAAGTGCAAGGAAGAAAGATTTGGGCCAAATGGAGAATGATCAAGCAGAAAAAGATTTGGCTCAACTGGAAAATGATCGAG
TAGAAAAACACAGTGATGATGAAATTTCGGAAATACCCTCAACATTTATGGAGAATACCACTAGCATAGTTACAGAGAACATCTCGGAAGATCAACAGCAAGAACCATTC
CAGTGGCTGGTTCATGGTTGGAGAGAAAAAATAGGCTTCAGTAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
GTCAACGCTGCCATCACCAAGCACTCAACTTCGCCATTTTCAATGGCGGACTCACGAGCGCCGCTGCCATCTCCATCTTCCCCACCGTCTTTACCTCCCAATGATTTGCT
ACCCAGACGCTTCAAGGTCATATGGCGCGTTCTATTGATCTCCAATTTCGCCCTTTCAGCCTATATGTTTGCAAGTGCAAGGAAGAAAGATTTGGGCCAAATGGAGAATG
ATCAAGCAGAAAAAGATTTGGCTCAACTGGAAAATGATCGAGTAGAAAAACACAGTGATGATGAAATTTCGGAAATACCCTCAACATTTATGGAGAATACCACTAGCATA
GTTACAGAGAACATCTCGGAAGATCAACAGCAAGAACCATTCCAGTGGCTGGTTCATGGTTGGAGAGAAAAAATAGGCTTCAGTAAAAAATGAATTGATAGGTGAAAAGC
TGATTCTTGAACAGTTCAATGTTCATCTTCTCAAAACTGATTGCTTCTCATCCAGGTAAATATGTTCAGCTGCTGTAAAATTTTCTTTTAGGCGATTTTTAGGAGACTGA
TTATTGTACTGAAACCTTCCTTAACCGGATATCTTCATGTAGATTTATTTGCAAGTTTGTAACAATAATTTCTAAGAATGTCAAACTTTTT
Protein sequenceShow/hide protein sequence
MADSRAPLPSPSSPPSLPPNDLLPRRFKVIWRVLLISNFALSAYMFASARKKDLGQMENDQAEKDLAQLENDRVEKHSDDEISEIPSTFMENTTSIVTENISEDQQQEPF
QWLVHGWREKIGFSKK