; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009448 (gene) of Snake gourd v1 genome

Gene IDTan0009448
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionhistone H4
Genome locationLG09:60427680..60427880
RNA-Seq ExpressionTan0009448
SyntenyTan0009448
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACG30835.1 histone H4 [Zea mays]3.2e-2196.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR+RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

CAA2631833.1 unnamed protein product [Spirodela intermedia]2.4e-2195.16Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISG+IYEETRGVL IL
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL

KAF2916318.1 hypothetical protein DAI22_09g110300 [Oryza sativa Japonica Group]1.4e-2196.77Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL IL
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL

XP_024360725.1 histone H4-like isoform X2 [Physcomitrium patens]3.2e-2190.91Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILFLII
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I   I+
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILFLII

XP_033491978.1 histone H4-like [Epinephelus lanceolatus]1.9e-2195.16Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL +L
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL

TrEMBL top hitse value%identityAlignment
A0A7I8JLM6 Histone H41.2e-2195.16Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISG+IYEETRGVL IL
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL

A0A7K5NZ86 Histone H4 (Fragment)9.1e-2295.16Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL +L
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGIL

A9SPA5 Histone H41.5e-2190.91Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILFLII
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I   I+
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILFLII

B6T152 Histone H41.5e-2196.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR+RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

M1CZH9 Histone H41.5e-2193.65Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILF
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I +
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILF

SwissProt top hitse value%identityAlignment
P59259 Histone H45.5e-2496.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

P62785 Histone H4 variant TH0115.5e-2496.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

Q6PMI5 Histone H45.5e-2496.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

Q6WZ83 Histone H45.5e-2496.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

Q71V09 Histone H45.5e-2496.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein3.9e-2596.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

AT1G07820.1 Histone superfamily protein3.9e-2596.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

AT1G07820.2 Histone superfamily protein3.9e-2596.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

AT2G28740.1 histone H43.9e-2596.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI

AT3G45930.1 Histone superfamily protein3.9e-2596.72Show/hide
Query:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI
        MSGRGKGGKGLGKGGAKR RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL I
Subjt:  MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCAGAGGCAAAGGAGGGAAAGGCCTCGGAAAAGGAGGAGCGAAGAGGCAGCGTAAGGTTCTGAGAGACAACATTCAAGGAATCACGAAGCCAGCGATCCGGCG
ACTGGCCAGGCGAGGCGGCGTAAAGCGAATCAGCGGCCTGATCTACGAAGAAACTCGCGGTGTCCTCGGAATTCTCTTTTTAATAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGCAGAGGCAAAGGAGGGAAAGGCCTCGGAAAAGGAGGAGCGAAGAGGCAGCGTAAGGTTCTGAGAGACAACATTCAAGGAATCACGAAGCCAGCGATCCGGCG
ACTGGCCAGGCGAGGCGGCGTAAAGCGAATCAGCGGCCTGATCTACGAAGAAACTCGCGGTGTCCTCGGAATTCTCTTTTTAATAATATGA
Protein sequenceShow/hide protein sequence
MSGRGKGGKGLGKGGAKRQRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLGILFLII