; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009475 (gene) of Snake gourd v1 genome

Gene IDTan0009475
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA ligase
Genome locationLG01:101028521..101029685
RNA-Seq ExpressionTan0009475
SyntenyTan0009475
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031776.1 hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-5489.43Show/hide
Query:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        MLN+Y+PFSFT KLKSSI CFR DHGD  ENE DSSPRTPRSPLK+ AAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
Subjt:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASPPTS R SP K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
XP_022138148.1 uncharacterized protein LOC111009386 [Momordica charantia]3.9e-4679.67Show/hide
Query:  NEYN--PFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        NEYN  PFSFTHKLKSSI CFR DHGDL ++ED++S R+PRSPLK+TA+E  ELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDE  R DD+F
Subjt:  NEYN--PFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASP +S  F P K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
XP_022940408.1 uncharacterized protein LOC111446022 [Cucurbita moschata]1.0e-5489.43Show/hide
Query:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        MLN+Y+PFSFT KLKSSI CFR DHGD  ENE DSSPRTPRSPLK+ AAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
Subjt:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASPPTS R SP K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
XP_022981208.1 uncharacterized protein LOC111480417 [Cucurbita maxima]2.7e-5589.43Show/hide
Query:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        MLNEY+PFSFT KLKSSIRCFR DH D  E+EDDSSPRTPRSPLK+ AAEFPE+RGMCRNLVARIGR RRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
Subjt:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASPPTSRR SP K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
XP_023523424.1 uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]2.5e-5691.06Show/hide
Query:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        MLN+Y+PFSFT KLKSSI CFR DHGD  ENEDDSSPRTPRSPLK+ AAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
Subjt:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASPPTSRR SP K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
TrEMBL top hitse value%identityAlignment
A0A1S3BVQ9 uncharacterized protein LOC1034937782.1e-3775.21Show/hide
Query:  MLNEYNPFSFTHKLKSSI-RCFRPDH-GDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDD
        M N YNPFSFTHKLKSSI  CFRPDH  +L ENEDD+        LK+  ++ PELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDEQVRDD
Subjt:  MLNEYNPFSFTHKLKSSI-RCFRPDH-GDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFASRLPASPP
        +EFPIRDF SRLPASPP
Subjt:  DEFPIRDFASRLPASPP
A0A5A7VBS3 DNA ligase2.1e-3775.21Show/hide
Query:  MLNEYNPFSFTHKLKSSI-RCFRPDH-GDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDD
        M N YNPFSFTHKLKSSI  CFRPDH  +L ENEDD+        LK+  ++ PELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDEQVRDD
Subjt:  MLNEYNPFSFTHKLKSSI-RCFRPDH-GDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFASRLPASPP
        +EFPIRDF SRLPASPP
Subjt:  DEFPIRDFASRLPASPP
A0A6J1CC83 uncharacterized protein LOC1110093861.9e-4679.67Show/hide
Query:  NEYN--PFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        NEYN  PFSFTHKLKSSI CFR DHGDL ++ED++S R+PRSPLK+TA+E  ELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDE  R DD+F
Subjt:  NEYN--PFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASP +S  F P K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
A0A6J1FP70 uncharacterized protein LOC1114460225.0e-5589.43Show/hide
Query:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        MLN+Y+PFSFT KLKSSI CFR DHGD  ENE DSSPRTPRSPLK+ AAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
Subjt:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASPPTS R SP K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
A0A6J1J1H3 uncharacterized protein LOC1114804171.3e-5589.43Show/hide
Query:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
        MLNEY+PFSFT KLKSSIRCFR DH D  E+EDDSSPRTPRSPLK+ AAEFPE+RGMCRNLVARIGR RRRYHHSADFRYDPSSYALNFEDEQVRDDDEF
Subjt:  MLNEYNPFSFTHKLKSSIRCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEF

Query:  PIRDFASRLPASPPTSRRFSPTK
        PIRDFASRLPASPPTSRR SP K
Subjt:  PIRDFASRLPASPPTSRRFSPTK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein9.8e-1141.54Show/hide
Query:  HKLKSSIRCFRPDHGDLAENEDDS-----SPRTPRSP---LKATAAEFPELRGMCRNLVARIGRSRR-----------RYHHS----ADFRYDPSSYALN
        H+++S I C     G  A  E ++       RTPRSP   LK+TA E  ELR  CR + +RI  + R            +HHS     DF YDP SYALN
Subjt:  HKLKSSIRCFRPDHGDLAENEDDS-----SPRTPRSP---LKATAAEFPELRGMCRNLVARIGRSRR-----------RYHHS----ADFRYDPSSYALN

Query:  FEDEQVRDDDEFPIRDFASRLPASPPTSRR
        FED  VR DD+    +F +RLP SP T  R
Subjt:  FEDEQVRDDDEFPIRDFASRLPASPPTSRR
AT5G35090.1 unknown protein3.7e-1034.53Show/hide
Query:  SFTHKLKSSI---RCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGM-----------------CRNLVARI--------GRSRRRYHHSADFRY
        S   KLKS      CFR  +    +N  D  P +P +  K+T  + P   GM                 C++L+ R+        G  +    H+ADF Y
Subjt:  SFTHKLKSSI---RCFRPDHGDLAENEDDSSPRTPRSPLKATAAEFPELRGM-----------------CRNLVARI--------GRSRRRYHHSADFRY

Query:  DPSSYALNFEDEQVRDD-DEFPIRDFASRLPASPPTSRR
        DPSSYALNF+     D+ D FP+R+F++RLP SPP+S +
Subjt:  DPSSYALNFEDEQVRDD-DEFPIRDFASRLPASPPTSRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACGCAAGTCCCACGGTTTCGCCGCTGCTTCCCAACCCGGTTGTGACAGCCAAACAGCCGCAAATGTCTCCTCTTCAGTCTTATCCATCTGTTTTTTCATTCTTCT
TCTTCCTCAAATTCTCTATATATTTCTTCCATTTCTCATTCCCAACTTCATCACTTCTCATTCATTTTTCATCTCTCTTAAAAAACCACTCAAGAAGTTGCAGAACACAG
CAAATTTCATCTTCACCATGTTGAACGAGTACAATCCATTTTCATTCACTCACAAGCTCAAATCCTCAATCCGCTGTTTCCGTCCCGATCATGGCGATTTGGCCGAAAAC
GAAGACGATTCTTCTCCAAGAACTCCTAGATCTCCTCTCAAAGCCACGGCCGCAGAGTTCCCGGAGCTCCGGGGAATGTGCCGGAATCTCGTCGCTCGGATCGGCCGGAG
TCGACGCCGGTACCATCACTCCGCCGATTTCCGATACGATCCTTCGAGCTATGCGCTTAATTTCGAAGACGAGCAGGTTCGCGATGATGACGAGTTTCCGATTAGGGATT
TCGCTTCGAGATTGCCGGCGTCGCCGCCGACTTCTCGGAGATTTTCGCCGACAAAATGA
mRNA sequenceShow/hide mRNA sequence
CTGATGCTACGCAAGTCCCACGGTTTCGCCGCTGCTTCCCAACCCGGTTGTGACAGCCAAACAGCCGCAAATGTCTCCTCTTCAGTCTTATCCATCTGTTTTTTCATTCT
TCTTCTTCCTCAAATTCTCTATATATTTCTTCCATTTCTCATTCCCAACTTCATCACTTCTCATTCATTTTTCATCTCTCTTAAAAAACCACTCAAGAAGTTGCAGAACA
CAGCAAATTTCATCTTCACCATGTTGAACGAGTACAATCCATTTTCATTCACTCACAAGCTCAAATCCTCAATCCGCTGTTTCCGTCCCGATCATGGCGATTTGGCCGAA
AACGAAGACGATTCTTCTCCAAGAACTCCTAGATCTCCTCTCAAAGCCACGGCCGCAGAGTTCCCGGAGCTCCGGGGAATGTGCCGGAATCTCGTCGCTCGGATCGGCCG
GAGTCGACGCCGGTACCATCACTCCGCCGATTTCCGATACGATCCTTCGAGCTATGCGCTTAATTTCGAAGACGAGCAGGTTCGCGATGATGACGAGTTTCCGATTAGGG
ATTTCGCTTCGAGATTGCCGGCGTCGCCGCCGACTTCTCGGAGATTTTCGCCGACAAAATGAGGTGTAAATCTCATGCGATTTTGAAGTGATGGGATTGGAATCTTCGGA
GTCTTTCTCCATTGCTTGTAACTGTATACGGTAATTTTATTTGGTGTTCGTCGAGCTAAATGTATAAATATCTAAAGCTCGCTAATTATTCTTTATAATAATAACAATAA
GCAATAATAAAAAGTTCGATGATTATCTCATCAAGTTTGACTTCAATCTTGCAAGTTTCAATAAATGTTCAAACCTAGTCCAACTTTATTCAAATTAATCATTGTTAATT
ACTAATATAAACTAAAATTTTAGTTGAATTGAAACCAGGGTTTTGTTAAGAAATCAAATGAATTTGAAGTAGTATATTATAAAATCATATCCAAATTATTCAACAGGTAA
TACATTACATCAATCATGAAATTATAGAGATAACAAGAACATAGTTTAACCGACATCAAATATGATTCAAGTAATGAGTTTGAATCCTCACACCTCCAATTGTTGATGGT
ACTAAAAAAGATCATGAAATTATTATTTTTTTTAGTCCAACAATAATGGAAATGTAAAAGATTTG
Protein sequenceShow/hide protein sequence
MLRKSHGFAAASQPGCDSQTAANVSSSVLSICFFILLLPQILYIFLPFLIPNFITSHSFFISLKKPLKKLQNTANFIFTMLNEYNPFSFTHKLKSSIRCFRPDHGDLAEN
EDDSSPRTPRSPLKATAAEFPELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEQVRDDDEFPIRDFASRLPASPPTSRRFSPTK