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Tan0009534 (gene) of Snake gourd v1 genome

Gene IDTan0009534
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationLG06:63207878..63208255
RNA-Seq ExpressionTan0009534
SyntenyTan0009534
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]2.2e-1036.67Show/hide
Query:  PNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPS-----------EDEPQ------------G
        PN   + + A    N     + NQ T+IKLDR+N+L+W+ +ALP L+ YKLEGHLTGE  CPE  + I  S           +D  Q             
Subjt:  PNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPS-----------EDEPQ------------G

Query:  LLLPNPEHDIWMSTDQLLMG
          + NP  + W+ TD LL+G
Subjt:  LLLPNPEHDIWMSTDQLLMG

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]8.2e-1038.46Show/hide
Query:  NAYQVRSGAIPVGNLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ------GLLL
        NA  +   A P    SFTN     + NQ T+IKLDR N+L+W+ +ALP L+SYKL  HL GES C          P  SI+    E   +       ++ 
Subjt:  NAYQVRSGAIPVGNLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ------GLLL

Query:  PNPEHDIWMSTDQLLMG
         NP+++ W++TD LL+G
Subjt:  PNPEHDIWMSTDQLLMG

XP_016900937.1 PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo]4.8e-1037.3Show/hide
Query:  KNPNAYQ-VRSGAIPVG-----NLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ-
        +NP  YQ   + A P+        SFTN     + NQ T+IKLDR N+L+W+ +ALP L+SYKL  HL GES C          P  SI+    E   + 
Subjt:  KNPNAYQ-VRSGAIPVG-----NLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ-

Query:  -----GLLLPNPEHDIWMSTDQLLMG
              ++  NP+++ W++TD LL+G
Subjt:  -----GLLLPNPEHDIWMSTDQLLMG

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]5.7e-1138.79Show/hide
Query:  ILKVPGPVHIPKNPNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLP------
        I  +P P+  P       V SGA+   +     L NQ TSIK+DR NFL+WQN+ALP LRSYKL  +LTG+  CP   ++   +    +G          
Subjt:  ILKVPGPVHIPKNPNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLP------

Query:  NPEHDIWMSTDQLLMG
        NP ++ W+  D+LL+G
Subjt:  NPEHDIWMSTDQLLMG

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]4.3e-1141.49Show/hide
Query:  VRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPP--SEDEPQGLLLPNPEHDIWMSTDQLLMG
        + S      N     + NQ  S+KLDR N+L+WQ +ALP L+SYKL+GHLT E+ CP   II P   +          NP+ D W++ D LL+G
Subjt:  VRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPP--SEDEPQGLLLPNPEHDIWMSTDQLLMG

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911162.3e-1037.3Show/hide
Query:  KNPNAYQ-VRSGAIPVG-----NLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ-
        +NP  YQ   + A P+        SFTN     + NQ T+IKLDR N+L+W+ +ALP L+SYKL  HL GES C          P  SI+    E   + 
Subjt:  KNPNAYQ-VRSGAIPVG-----NLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ-

Query:  -----GLLLPNPEHDIWMSTDQLLMG
              ++  NP+++ W++TD LL+G
Subjt:  -----GLLLPNPEHDIWMSTDQLLMG

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase1.0e-1036.67Show/hide
Query:  PNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPS-----------EDEPQ------------G
        PN   + + A    N     + NQ T+IKLDR+N+L+W+ +ALP L+ YKLEGHLTGE  CPE  + I  S           +D  Q             
Subjt:  PNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPS-----------EDEPQ------------G

Query:  LLLPNPEHDIWMSTDQLLMG
          + NP  + W+ TD LL+G
Subjt:  LLLPNPEHDIWMSTDQLLMG

A0A5A7VPY0 Uncharacterized protein4.0e-1038.46Show/hide
Query:  NAYQVRSGAIPVGNLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ------GLLL
        NA  +   A P    SFTN     + NQ T+IKLDR N+L+W+ +ALP L+SYKL  HL GES C          P  SI+    E   +       ++ 
Subjt:  NAYQVRSGAIPVGNLSFTN-----LFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESIC----------PEMSIIIPPSEDEPQ------GLLL

Query:  PNPEHDIWMSTDQLLMG
         NP+++ W++TD LL+G
Subjt:  PNPEHDIWMSTDQLLMG

A0A6J1DCW4 uncharacterized protein LOC1110195982.7e-1138.79Show/hide
Query:  ILKVPGPVHIPKNPNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLP------
        I  +P P+  P       V SGA+   +     L NQ TSIK+DR NFL+WQN+ALP LRSYKL  +LTG+  CP   ++   +    +G          
Subjt:  ILKVPGPVHIPKNPNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLP------

Query:  NPEHDIWMSTDQLLMG
        NP ++ W+  D+LL+G
Subjt:  NPEHDIWMSTDQLLMG

A0A803PAZ1 Uncharacterized protein1.8e-1039.78Show/hide
Query:  VRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLP-NPEHDIWMSTDQLLMG
        V  G+    N+SF N   Q  SIKLDRNN+ +W+N+    +R ++LEG++ G   CP   +  P + +   G  L  NPE++ W+  DQLLMG
Subjt:  VRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLP-NPEHDIWMSTDQLLMG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACACCCAAGAATCCTCGACCTCTCAAACTCACTCCCCTATCCTCAAGGTCCCTGGACCTGTTCATATCCCAAAAAACCCAAACGCCTACCAGGTGAGATCGGG
AGCCATACCGGTAGGCAACCTTTCCTTCACCAATCTTTTCAATCAAGCCACTTCCATCAAGCTTGACCGAAACAACTTCCTTGTATGGCAGAACATTGCCCTTCCATTTC
TCAGGAGTTACAAACTAGAGGGACATCTTACTGGTGAGTCTATTTGCCCTGAGATGTCAATCATCATCCCTCCGTCTGAAGACGAACCACAAGGTTTACTCCTACCGAAT
CCAGAGCACGATATTTGGATGTCAACTGATCAACTACTTATGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACACCCAAGAATCCTCGACCTCTCAAACTCACTCCCCTATCCTCAAGGTCCCTGGACCTGTTCATATCCCAAAAAACCCAAACGCCTACCAGGTGAGATCGGG
AGCCATACCGGTAGGCAACCTTTCCTTCACCAATCTTTTCAATCAAGCCACTTCCATCAAGCTTGACCGAAACAACTTCCTTGTATGGCAGAACATTGCCCTTCCATTTC
TCAGGAGTTACAAACTAGAGGGACATCTTACTGGTGAGTCTATTTGCCCTGAGATGTCAATCATCATCCCTCCGTCTGAAGACGAACCACAAGGTTTACTCCTACCGAAT
CCAGAGCACGATATTTGGATGTCAACTGATCAACTACTTATGGGATGA
Protein sequenceShow/hide protein sequence
MANTQESSTSQTHSPILKVPGPVHIPKNPNAYQVRSGAIPVGNLSFTNLFNQATSIKLDRNNFLVWQNIALPFLRSYKLEGHLTGESICPEMSIIIPPSEDEPQGLLLPN
PEHDIWMSTDQLLMG