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Tan0009539 (gene) of Snake gourd v1 genome

Gene IDTan0009539
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiondormancy-associated protein 2-like isoform X2
Genome locationLG11:9711617..9713199
RNA-Seq ExpressionTan0009539
SyntenyTan0009539
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578909.1 hypothetical protein SDJN03_23357, partial [Cucurbita argyrosperma subsp. sororia]5.1e-2271.28Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIST NV AAL Y+SI PQ+   GRKVLE KYE NGRSGYN+ EPNGR GYNS E NGRSGYN  +P GR GYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

KAG7016430.1 hypothetical protein SDJN02_21539, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-2271.28Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIST NV AAL Y+SI PQ+   G KVLE KYE NGRSGYN+ EPNGR GYNS EPNGRSGYN  +P GR GYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

XP_022939479.1 dormancy-associated protein 2-like isoform X2 [Cucurbita moschata]8.8e-2270.21Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIS  NV AAL Y+SI PQ+   GRKVLE KYE  GRSGYN+ EPNGR GYNS EPNGRSGYN ++P GR GYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

XP_022993935.1 P granule abnormality protein 1-like [Cucurbita maxima]2.5e-2474.47Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDS-IPQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIST  VAAAL Y+S IPQ+   GRKVLE KYE NGRSGYN+ EP GRGGYNSYEPNGRSGYN  +P GRGGYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDS-IPQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

XP_023551561.1 N66 matrix protein-like [Cucurbita pepo subsp. pepo]1.5e-2171.28Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIS  NV AAL Y+SI PQ+   GRKVLE KYE NGRSGYNN EPNGR GYNS E NGRSGYN  +P GR GYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

TrEMBL top hitse value%identityAlignment
A0A0E0CEQ9 Uncharacterized protein3.9e-0773.17Show/hide
Query:  PNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        P+GRSGYN+  PNGRGGYNS  PNGR GYN   P GRGGYN
Subjt:  PNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

A0A0E0JUX1 Uncharacterized protein1.1e-0673.17Show/hide
Query:  PNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        PNGRSGYN+  PNGR GYNS  PNGRSGYN   P GR GYN
Subjt:  PNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

A0A6J1FHA4 dormancy-associated protein 2-like isoform X24.2e-2270.21Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIS  NV AAL Y+SI PQ+   GRKVLE KYE  GRSGYN+ EPNGR GYNS EPNGRSGYN ++P GR GYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

A0A6J1FLR8 N66 matrix protein-like isoform X12.6e-1957.76Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKY----------------------EPNGRSGYNNYEPNGRGGYNSYEPNG
        MA+SKA   M MAAFLA+FLLIS  NV AAL Y+SI PQ+   GRKVLE KY                      EPNGRS YN+ EPNGR GYNS EPNG
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDSI-PQQLPFGRKVLEAKY----------------------EPNGRSGYNNYEPNGRGGYNSYEPNG

Query:  RSGYNGYKPTGRGGYN
        RSGYN ++P GR GYN
Subjt:  RSGYNGYKPTGRGGYN

A0A6J1JZW6 P granule abnormality protein 1-like1.2e-2474.47Show/hide
Query:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDS-IPQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN
        MA+SKA   M MAAFLA+FLLIST  VAAAL Y+S IPQ+   GRKVLE KYE NGRSGYN+ EP GRGGYNSYEPNGRSGYN  +P GRGGYN
Subjt:  MANSKA---MVMAAFLAIFLLISTQNVAAALPYDS-IPQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCTAAGGCTATGGTCATGGCTGCCTTCCTTGCCATCTTCCTCCTCATATCCACTCAGAACGTAGCGGCTGCTCTGCCTTATGACTCCATACCGCAACAACT
TCCATTTGGACGAAAGGTTCTTGAAGCTAAATATGAACCCAATGGAAGAAGTGGATATAATAACTATGAACCCAATGGAAGAGGTGGATATAATAGCTATGAACCCAACG
GCAGAAGTGGCTACAATGGCTACAAGCCCACAGGAAGGGGAGGATATAATTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAAAAAAAAACATAAAGCTTTCCCTTATTCTGAAAATGGCAAACTCTAAGGCTATGGTCATGGCTGCCTTCCTTGCCATCTTCCTCCTCATATCCACTC
AGAACGTAGCGGCTGCTCTGCCTTATGACTCCATACCGCAACAACTTCCATTTGGACGAAAGGTTCTTGAAGCTAAATATGAACCCAATGGAAGAAGTGGATATAATAAC
TATGAACCCAATGGAAGAGGTGGATATAATAGCTATGAACCCAACGGCAGAAGTGGCTACAATGGCTACAAGCCCACAGGAAGGGGAGGATATAATTAATTAAGTTCATA
ATCGATTATGAACTTAATTAATCCCATGCATGTTCACAAAATATATGAACAGTACTCTACCTATATATATGTGTATATATATGCTGTTATGTTACAGTTTTTATAGATAA
AAACAAATAAATAAATAAATATCTGGGTTTGTGTGTGTTATGTATTAATGTGTTTCTAATCTGCATCTAAATTTATAAATGTTGTCTTGTCTATGTGGACTATTACTTTT
GTGAAGCTCAAACCCCAGCTAAGAAGATTGACCCAGAAGTCAAAAATTAAC
Protein sequenceShow/hide protein sequence
MANSKAMVMAAFLAIFLLISTQNVAAALPYDSIPQQLPFGRKVLEAKYEPNGRSGYNNYEPNGRGGYNSYEPNGRSGYNGYKPTGRGGYN