; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009578 (gene) of Snake gourd v1 genome

Gene IDTan0009578
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationLG03:78429007..78431891
RNA-Seq ExpressionTan0009578
SyntenyTan0009578
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142284.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]1.0e-3690.72Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MS+AAAMAARSALRSTVARA ISGR+T GAKVKS RSPFG+PK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

XP_022142285.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]2.5e-3590.53Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MS+AAAMAARSALRSTVARA ISGR+T GAKVKS RSPFG+PK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPE

XP_022142286.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]2.5e-3590.53Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MS+AAAMAARSALRSTVARA ISGR+T GAKVKS RSPFG+PK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPE

XP_022142288.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Momordica charantia]5.0e-3690.62Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MS+AAAMAARSALRSTVARA ISGR+T GAKVKS RSPFG+PK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

XP_022926141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]1.5e-3589.69Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSA RST+ARATIS R+TNGAKVKSP SPF IPK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein1.0e-3971.72Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG--QV
        MSSAAAMAARSA RST+ARA ISGR T+ AK KS  SPF IPK NPLSQSH ILRSPVE+S C+ESLLPYHSATASALLTSMLSVSRRSYGWTPE   ++
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG--QV

Query:  TYDFSFSLFIVGIN-----CSNMTRMILISSTTQIAMMMYDECQM
          D       + IN      SN T MILISSTTQIAMMMYDE +M
Subjt:  TYDFSFSLFIVGIN-----CSNMTRMILISSTTQIAMMMYDECQM

A0A6J1CL53 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X14.9e-3790.72Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MS+AAAMAARSALRSTVARA ISGR+T GAKVKS RSPFG+PK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

A0A6J1CMX8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X42.4e-3690.62Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MS+AAAMAARSALRSTVARA ISGR+T GAKVKS RSPFG+PK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

A0A6J1EE17 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X27.0e-3689.69Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSA RST+ARATIS R+TNGAKVKSP SPF IPK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

A0A6J1IR78 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X37.0e-3689.69Show/hide
Query:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSA RST+ARATIS R+TNGAKVKSP SPF IPK NPLSQSH ILRSPVEMS CVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial3.4e-1150.54Show/hide
Query:  SSAAAMAARSALRSTVAR--ATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGW
        +SA    ARS LR+  +R  A  +GR  + AK  +P       + +PL      LR+PVE+SFCVESLLPYHSATASAL+TS LS+S ++YGW
Subjt:  SSAAAMAARSALRSTVAR--ATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGW

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.2e-1454.35Show/hide
Query:  AARSALRSTVARATISG-RITNGAK--VKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS  +RA+ +  R + G K    S R+ F +PK +PL+    I RSPVE+S CVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSALRSTVARATISG-RITNGAK--VKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT1G28395.2 unknown protein1.2e-1454.35Show/hide
Query:  AARSALRSTVARATISG-RITNGAK--VKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS  +RA+ +  R + G K    S R+ F +PK +PL+    I RSPVE+S CVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSALRSTVARATISG-RITNGAK--VKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT1G28395.3 unknown protein1.2e-1454.35Show/hide
Query:  AARSALRSTVARATISG-RITNGAK--VKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS  +RA+ +  R + G K    S R+ F +PK +PL+    I RSPVE+S CVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSALRSTVARATISG-RITNGAK--VKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT2G33847.1 unknown protein1.0e-1558.14Show/hide
Query:  AARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS  RS V RA ++   +      S RS F +PK +PL  SH I RSPVE+S CVE++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWT

AT2G33847.2 unknown protein2.1e-1657.3Show/hide
Query:  AARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS V RA ++   +      S RS F +PK +PL  SH I RSPVE+S CVE++LPYH+ATASALL SMLSVS RS  WT +G
Subjt:  AARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCAGATCAACCGTAGCCCGAGCCACCATTTCCGGCAGAATTACCAACGGTGCGAAAGTGAAATCCCCCCGATC
TCCGTTCGGCATCCCCAAGCATAACCCACTCTCCCAATCCCATTGCATTTTGAGGTCTCCTGTTGAGATGAGTTTCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTTTCTCGTCGGAGCTACGGTTGGACCCCTGAAGGTCAAGTTACCTATGACTTTTCTTTTTCTTTGTTTATCGTTGGC
ATTAATTGTAGTAACATGACAAGGATGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATGTCAGATGGACTTACCTAAGATGGGTGATTACTT
TCTGTTGAGATGCGGTGCATCGATCATATTTTCGGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCAGATCAACCGTAGCCCGAGCCACCATTTCCGGCAGAATTACCAACGGTGCGAAAGTGAAATCCCCCCGATC
TCCGTTCGGCATCCCCAAGCATAACCCACTCTCCCAATCCCATTGCATTTTGAGGTCTCCTGTTGAGATGAGTTTCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTTTCTCGTCGGAGCTACGGTTGGACCCCTGAAGGTCAAGTTACCTATGACTTTTCTTTTTCTTTGTTTATCGTTGGC
ATTAATTGTAGTAACATGACAAGGATGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATGTCAGATGGACTTACCTAAGATGGGTGATTACTT
TCTGTTGAGATGCGGTGCATCGATCATATTTTCGGGAATTTGA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSALRSTVARATISGRITNGAKVKSPRSPFGIPKHNPLSQSHCILRSPVEMSFCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQVTYDFSFSLFIVG
INCSNMTRMILISSTTQIAMMMYDECQMDLPKMGDYFLLRCGASIIFSGI