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Tan0009602 (gene) of Snake gourd v1 genome

Gene IDTan0009602
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG03:25335913..25336818
RNA-Seq ExpressionTan0009602
SyntenyTan0009602
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]3.2e-2039.1Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F KALL+ EEP G     E +F    FW+ +H +PL+C   +  + LG+ IGE  E+D    G+C G  ++++V +DV K L R   V +    +E  + 
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDCDLFAKDSEEE
          YE+LPD CY+CG+IGHV +DC +     E E
Subjt:  TTYEKLPDFCYKCGKIGHVFKDCDLFAKDSEEE

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]4.2e-2031.67Show/hide
Query:  MFYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIG--SMVEEV
        +F K LL+  E  G+ + ++ +F+Y  FW+ LHNLPL C  R+    LG  +G+  E+D+ + G C G  ++I+V IDV   L RG  V +G    V EV
Subjt:  MFYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIG--SMVEEV

Query:  WIPTTYEKLPDFCYKCGKIGHVFKDCDLFAKD--SEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSREDES
         I   YE+LP+FCY CGKIGH+ +DC L  K+  S     F   +  +   +S+  G K+        G          V+   ++ +   S     D  
Subjt:  WIPTTYEKLPDFCYKCGKIGHVFKDCDLFAKD--SEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSREDES

Query:  KADISLNLSKQNVSEDSPSLT
        + D+   L   N  E   +++
Subjt:  KADISLNLSKQNVSEDSPSLT

VVA32948.1 PREDICTED: DUF4283 domain-containing [Prunus dulcis]2.5e-2034.42Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F KAL+L E P G+   S+   KYA FW+ +HN+PL C      + +GN  G  ++V     G C G  ++++V +DV+K L RG  + + S    V++ 
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDC---DLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSRED-ESK
          YE+LP+FC+ CG++GHVFK+C   D  AK ++E+   S   +   ++  R+   K          R  G GS    +  KE +++    QS    E  
Subjt:  TTYEKLPDFCYKCGKIGHVFKDC---DLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSRED-ESK

Query:  ADISLN-LSKQNVSE
        A+ SL  LSKQ V E
Subjt:  ADISLN-LSKQNVSE

XP_024042744.1 uncharacterized protein LOC112099563 [Citrus clementina]2.9e-2140.65Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F +AL++ +EP G     +  F +A FW+ +HN+PL C  R  V+ LG  +GE +EV++DD+G C GL  +++V ID+ K L +   +++    +EV +P
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDC
          Y++L DFC+ CG IGH FK+C
Subjt:  TTYEKLPDFCYKCGKIGHVFKDC

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]1.5e-2041.94Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F K LL+  E   N + S+ +  +  FWVH+ NLPLI   +K  +++GN +G+FI++D +D G   G TM I+V +DV K L RG  + + S VE +W+ 
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDCD
          YE+LP +CY CG++GH  ++CD
Subjt:  TTYEKLPDFCYKCGKIGHVFKDCD

TrEMBL top hitse value%identityAlignment
A0A5C7GZQ4 CCHC-type domain-containing protein1.6e-2039.1Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F KALL+ EEP G     E +F    FW+ +H +PL+C   +  + LG+ IGE  E+D    G+C G  ++++V +DV K L R   V +    +E  + 
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDCDLFAKDSEEE
          YE+LPD CY+CG+IGHV +DC +     E E
Subjt:  TTYEKLPDFCYKCGKIGHVFKDCDLFAKDSEEE

A0A5C7H9Y2 CCHC-type domain-containing protein2.1e-2031.67Show/hide
Query:  MFYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIG--SMVEEV
        +F K LL+  E  G+ + ++ +F+Y  FW+ LHNLPL C  R+    LG  +G+  E+D+ + G C G  ++I+V IDV   L RG  V +G    V EV
Subjt:  MFYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIG--SMVEEV

Query:  WIPTTYEKLPDFCYKCGKIGHVFKDCDLFAKD--SEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSREDES
         I   YE+LP+FCY CGKIGH+ +DC L  K+  S     F   +  +   +S+  G K+        G          V+   ++ +   S     D  
Subjt:  WIPTTYEKLPDFCYKCGKIGHVFKDCDLFAKD--SEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSREDES

Query:  KADISLNLSKQNVSEDSPSLT
        + D+   L   N  E   +++
Subjt:  KADISLNLSKQNVSEDSPSLT

A0A5E4G034 PREDICTED: DUF4283 domain-containing1.2e-2034.42Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F KAL+L E P G+   S+   KYA FW+ +HN+PL C      + +GN  G  ++V     G C G  ++++V +DV+K L RG  + + S    V++ 
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDC---DLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSRED-ESK
          YE+LP+FC+ CG++GHVFK+C   D  AK ++E+   S   +   ++  R+   K          R  G GS    +  KE +++    QS    E  
Subjt:  TTYEKLPDFCYKCGKIGHVFKDC---DLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSRED-ESK

Query:  ADISLN-LSKQNVSE
        A+ SL  LSKQ V E
Subjt:  ADISLN-LSKQNVSE

A0A6J1DU55 uncharacterized protein LOC1110231352.7e-2035.2Show/hide
Query:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP
        F KAL++ ++P  +   SE EF    FW+HL +LP+    +     LGN IG F++VD +++G   G +++I+V ID+ K L RG  + I   +   WIP
Subjt:  FYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIP

Query:  TTYEKLPDFCYKCGKIGHVFKDCD---LFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSRED
          YE+LPDFCY CG IGH   DCD   L A+D       SE    + +  S++   K      P R    G  S  + E   E      S Q+ +D
Subjt:  TTYEKLPDFCYKCGKIGHVFKDCD---LFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSRED

A0A803P119 Uncharacterized protein3.5e-2037.41Show/hide
Query:  EFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIPTTYEKLPDFCYKCGKIGHVF
        +F +  FWV +H LP +   +    ++G+ +GEF++VD D      G  M+I++ +DV + L+RGT++KI  +V+++W+   YEKLPD CYKCG++GH F
Subjt:  EFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIPTTYEKLPDFCYKCGKIGHVF

Query:  KDCDLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGR
          C  F +   E+V    SL   P+ K           P P RG GR
Subjt:  KDCDLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTACAAAGCCCTCCTTCTGTTCGAAGAACCAAGAGGGAACTGTCGGGGGTCAGAATGGGAGTTCAAATATGCAATTTTCTGGGTCCACTTACATAACTTACCGTT
GATCTGTTATTGCAGGAAATGGGTCAAAGTCCTTGGAAATGGGATAGGAGAATTCATAGAAGTTGATTCCGACGACCAAGGAAACTGCGAAGGATTGACCATGAAAATCA
AAGTCAGAATTGATGTTAACAAGCTGCTGATCAGGGGCACTATGGTTAAAATTGGCTCCATGGTAGAAGAAGTGTGGATTCCGACCACTTACGAAAAGCTACCGGACTTC
TGTTATAAATGTGGTAAAATAGGACATGTTTTCAAAGATTGTGATCTTTTTGCCAAGGATTCGGAAGAGGAGGTTCTTTTTAGCGAGAGCCTGAGTGAAATACCTTATAA
CAAAAGTAGAAGTAGAGGAGGAAAGGAAGAAGATACCCCAAGGCCTATCAGAGGAAGGGGACGAGGTAGGGGATCCGGCAGAGCTGTGGAAGCAAGAAAAGAGTACCAAG
TCGACCCCAGTAGCGGACAGAGCAGAGAGGATGAAAGCAAGGCTGACATAAGTTTGAACCTCTCCAAGCAAAATGTTTCTGAGGATTCCCCATCCTTGACCCTCGAGGAA
AAAGTTTACCAAACGAACATCGAAGGAAAGACCTCAACCCCAACTCCAAAGACAAGTACAATAGGAAAAGATACTCCCCTAAGCCCTCAACAACTACAACCCACAAAAGA
AACTTCTAATGCTGCAAATGATACTAAAATGACAGACCTTATAGGAGTAAAGGTCAAATCCCTTACCTTAGACAGAGAGACAAACTCTTTAGAAAACACAACCATCTGTT
GTTTCTTTTTGGTATCCTACGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTACAAAGCCCTCCTTCTGTTCGAAGAACCAAGAGGGAACTGTCGGGGGTCAGAATGGGAGTTCAAATATGCAATTTTCTGGGTCCACTTACATAACTTACCGTT
GATCTGTTATTGCAGGAAATGGGTCAAAGTCCTTGGAAATGGGATAGGAGAATTCATAGAAGTTGATTCCGACGACCAAGGAAACTGCGAAGGATTGACCATGAAAATCA
AAGTCAGAATTGATGTTAACAAGCTGCTGATCAGGGGCACTATGGTTAAAATTGGCTCCATGGTAGAAGAAGTGTGGATTCCGACCACTTACGAAAAGCTACCGGACTTC
TGTTATAAATGTGGTAAAATAGGACATGTTTTCAAAGATTGTGATCTTTTTGCCAAGGATTCGGAAGAGGAGGTTCTTTTTAGCGAGAGCCTGAGTGAAATACCTTATAA
CAAAAGTAGAAGTAGAGGAGGAAAGGAAGAAGATACCCCAAGGCCTATCAGAGGAAGGGGACGAGGTAGGGGATCCGGCAGAGCTGTGGAAGCAAGAAAAGAGTACCAAG
TCGACCCCAGTAGCGGACAGAGCAGAGAGGATGAAAGCAAGGCTGACATAAGTTTGAACCTCTCCAAGCAAAATGTTTCTGAGGATTCCCCATCCTTGACCCTCGAGGAA
AAAGTTTACCAAACGAACATCGAAGGAAAGACCTCAACCCCAACTCCAAAGACAAGTACAATAGGAAAAGATACTCCCCTAAGCCCTCAACAACTACAACCCACAAAAGA
AACTTCTAATGCTGCAAATGATACTAAAATGACAGACCTTATAGGAGTAAAGGTCAAATCCCTTACCTTAGACAGAGAGACAAACTCTTTAGAAAACACAACCATCTGTT
GTTTCTTTTTGGTATCCTACGAATAG
Protein sequenceShow/hide protein sequence
MFYKALLLFEEPRGNCRGSEWEFKYAIFWVHLHNLPLICYCRKWVKVLGNGIGEFIEVDSDDQGNCEGLTMKIKVRIDVNKLLIRGTMVKIGSMVEEVWIPTTYEKLPDF
CYKCGKIGHVFKDCDLFAKDSEEEVLFSESLSEIPYNKSRSRGGKEEDTPRPIRGRGRGRGSGRAVEARKEYQVDPSSGQSREDESKADISLNLSKQNVSEDSPSLTLEE
KVYQTNIEGKTSTPTPKTSTIGKDTPLSPQQLQPTKETSNAANDTKMTDLIGVKVKSLTLDRETNSLENTTICCFFLVSYE