; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009608 (gene) of Snake gourd v1 genome

Gene IDTan0009608
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RMA3
Genome locationLG01:109222776..109225415
RNA-Seq ExpressionTan0009608
SyntenyTan0009608
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141226.1 E3 ubiquitin-protein ligase RMA3 [Cucumis sativus]5.8e-13591.95Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQNYS PEAYLESEQDVSLKQNWKSIS QS +SEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQA-YGDFASYAPSYLGNAVITSLLNPTIGMFGE
        LYGRGTSNSDSESKKSHLGM VPRRPPPSMNTP HSN++S L+PSQELH +YIRSPS PIYHQQYFPQA YG+FASY+PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQA-YGDFASYAPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGS+DGNLL Y PYNNSI GNAS+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_008452467.1 PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo]8.1e-13792.69Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQNYS PEAYLESEQDVSLKQNWKSIS +S +SEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET
        LYGRGTSNSDSESKKSHLGM VPRRPPPSMNTPP SN++SA +PSQELH +YIRSPS PIYHQQYFPQAYG+FASYAPSYLGNAVITSLLNPTIGMFGET
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET

Query:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        VFTRIFGS+DGNLL YPPYNNSI GNAS+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_022139659.1 E3 ubiquitin-protein ligase RMA3-like [Momordica charantia]4.8e-12988.12Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQ Y+TPEAY ESEQDVSLKQNWKSIS+Q  VS+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPS-MNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGE
        LYGRG SN+DSESKKSHLG+ VPRRPPPS  NT  +SNATSALHPSQ+LHP+Y RSPS PIYHQQYFPQAYGD A+Y PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPS-MNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGS+D NLL YPPYNNSIPGN SSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_023521850.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo]2.8e-12986.92Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        M+Q YS+PEAYLESEQDVSLKQNWKS+SAQS VSEDANGCFDCNICLDSAADPVVTLCGHL+CWPCIYKW HVQISSNE ENT NCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET
        LYGRG S SDSESKKSHLG+ VPRRPPPSMNTPPHSNA SALHPS+ELHP+YIRSP   IYHQQYFPQAYG+FA YAPSYLGNA++TSLLNPTIG+ GET
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET

Query:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        V+TRIFGS DGNLL YPPYN+S+ GN  +RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_038899693.1 E3 ubiquitin-protein ligase RMA3 [Benincasa hispida]2.7e-14093.94Show/hide
Query:  MEQNYSTP----EAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPS
        MEQNYS P    EAYLESEQDVSLKQNWKSIS QS VSEDANGCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWLHVQISSN PENTQNCPVCKASITPS
Subjt:  MEQNYSTP----EAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPS

Query:  SLVPLYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGM
        SLVPLYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHP+Y+RSPS PIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGM
Subjt:  SLVPLYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGM

Query:  FGETVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        FGETVFTRIFGS+DGNLL YPPYNN+IPGNAS+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  FGETVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

TrEMBL top hitse value%identityAlignment
A0A0A0KZN0 RING-type domain-containing protein2.8e-13591.95Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQNYS PEAYLESEQDVSLKQNWKSIS QS +SEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQA-YGDFASYAPSYLGNAVITSLLNPTIGMFGE
        LYGRGTSNSDSESKKSHLGM VPRRPPPSMNTP HSN++S L+PSQELH +YIRSPS PIYHQQYFPQA YG+FASY+PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQA-YGDFASYAPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGS+DGNLL Y PYNNSI GNAS+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A1S3BTX0 E3 ubiquitin-protein ligase RMA33.9e-13792.69Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQNYS PEAYLESEQDVSLKQNWKSIS +S +SEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET
        LYGRGTSNSDSESKKSHLGM VPRRPPPSMNTPP SN++SA +PSQELH +YIRSPS PIYHQQYFPQAYG+FASYAPSYLGNAVITSLLNPTIGMFGET
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET

Query:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        VFTRIFGS+DGNLL YPPYNNSI GNAS+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A5A7VD79 E3 ubiquitin-protein ligase RMA33.9e-13792.69Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQNYS PEAYLESEQDVSLKQNWKSIS +S +SEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET
        LYGRGTSNSDSESKKSHLGM VPRRPPPSMNTPP SN++SA +PSQELH +YIRSPS PIYHQQYFPQAYG+FASYAPSYLGNAVITSLLNPTIGMFGET
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET

Query:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        VFTRIFGS+DGNLL YPPYNNSI GNAS+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A6J1CDN1 E3 ubiquitin-protein ligase RMA3-like2.3e-12988.12Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        MEQ Y+TPEAY ESEQDVSLKQNWKSIS+Q  VS+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPS-MNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGE
        LYGRG SN+DSESKKSHLG+ VPRRPPPS  NT  +SNATSALHPSQ+LHP+Y RSPS PIYHQQYFPQAYGD A+Y PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPS-MNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGS+D NLL YPPYNNSIPGN SSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A6J1J1I0 E3 ubiquitin-protein ligase RMA3-like1.7e-12785.77Show/hide
Query:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP
        M+Q YS  EAYLESE DVSLKQNWKS+SAQS VSEDANGCFDCNICLDSAADPVVTLCGHL+CWPCIYKW HVQISSNE ENT NCPVCKASIT SSLVP
Subjt:  MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVP

Query:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET
        LYGRG SNSDSESKKSHLG+ +PRRPPPSMNTPPHSNA SALHPS+ELHP+YIRSP   IYHQQYFPQAYG+FA YAPSYLGNA++TSLLNPTIG+ GET
Subjt:  LYGRGTSNSDSESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET

Query:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        V+TRIFGS DGNLL YPPYN+S+ GN  +RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  VFTRIFGSMDGNLLSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA11.6e-3942.5Show/hide
Query:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVP
        ++S  S  ++D+N  FDCNICLDS  +PVVTLCGHL+CWPCI+KWL VQ   +S+E +  + CPVCK+ ++ S+LVPLYGRG   +  E K S     VP
Subjt:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVP

Query:  RRPPP---SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN
        +RP      +  P    A++ L  SQ +H     SP      + Y+P + G  +S + SY      +++L+P + M GE V TR+FG+   +  +YP   
Subjt:  RRPPP---SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN

Query:  NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        N + G +  RMRR+ MQ DKSL R+  F  CC ++CLLLF
Subjt:  NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

P93030 E3 ubiquitin-protein ligase RMA22.5e-2733.62Show/hide
Query:  DANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNE-------PENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRRPPP
        D+ G FDCNICLD   DPVVTLCGHL+CWPCI+KW +   +S +             CPVCK+ ++ ++LVP+YGRG        K    G  VP R   
Subjt:  DANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNE-------PENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRRPPP

Query:  SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYNNSIPGNAS
                                   P+ P+Y  +   Q  G+  S    Y        + +P +G+  E V+ R+FG    N+  Y   N        
Subjt:  SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYNNSIPGNAS

Query:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
         R RR+ MQ ++SL+RV +FL C   +CL LF
Subjt:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Q09463 E3 ubiquitin ligase rnf-54.2e-1945.19Show/hide
Query:  SMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRRPPPSM
        S  ++D +  F+CNICLD+A D VV+LCGHL+CWPC+ +WL  +       N Q CPVCK++I  + +VP+YGRG  +SD   K       VP RP    
Subjt:  SMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRRPPPSM

Query:  NTPP
        + PP
Subjt:  NTPP

Q6R567 E3 ubiquitin-protein ligase RMA1H11.4e-4342.17Show/hide
Query:  WKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQ--NCPVCKASITPSSLVPLYGR-GTSNSDSESKKSHLGM
        WKS++ +  V E+ +G FDCNICLD   +PV+TLCGHLYCWPCIYKW++ Q  S+E  + Q   CPVCKA ++  +L+PLYGR G S   SE K  +LG+
Subjt:  WKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQ--NCPVCKASITPSSLVPLYGR-GTSNSDSESKKSHLGM

Query:  VVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNP--------TIGMFGETVFTRIFGSMDGN
        V+P+RPP            S       L P    +PSQ +  + Y  Q+     +  P+Y G+ + + +L+P           M GE  + RIFG+    
Subjt:  VVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNP--------TIGMFGETVFTRIFGSMDGN

Query:  LLSYP-PYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        + +YP  YN +I  ++S RMRRQ  Q D+SL R+  FLFCCF+ CL+LF
Subjt:  LLSYP-PYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Q8GUK7 E3 ubiquitin-protein ligase RMA36.6e-4948.58Show/hide
Query:  KQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISS-NEPENTQNCPVCKASITPSSLVPLYGRGTSNSDS---ESKKS
        KQ     +A +    + +GCFDCNICLD+A DPVVTLCGHL+CWPCIYKWLHVQ+SS +  ++  NCPVCK++IT +SLVPLYGRG S+  S     K+ 
Subjt:  KQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISS-NEPENTQNCPVCKASITPSSLVPLYGRGTSNSDS---ESKKS

Query:  HLGMVVPRRPPPSMNTPPHSNATSALHPS---QELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNL
         L   +PRRP PS    P ++A S+L+PS   Q L P +        ++ QY P+    F +   + L NAV+ S L P IGMFG+ V+TRIFG+    +
Subjt:  HLGMVVPRRPPPSMNTPPHSNATSALHPS---QELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNL

Query:  LSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
            PY        S RM    MQ +KSLNRVSIF  CC I+CLLLF
Subjt:  LSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein2.4e-2549.59Show/hide
Query:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRR
        S S+ +  + + +  F+CNICLD A DP+VTLCGHL+CWPC+YKWLH+   S      ++CPVCKA I    LVPLYGRG S++D  S KS  G+ VP R
Subjt:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRR

Query:  PP---PSMNTPPHSNATSALH
        P    P    PP  N   A H
Subjt:  PP---PSMNTPPHSNATSALH

AT4G03510.1 RING membrane-anchor 11.2e-4042.5Show/hide
Query:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVP
        ++S  S  ++D+N  FDCNICLDS  +PVVTLCGHL+CWPCI+KWL VQ   +S+E +  + CPVCK+ ++ S+LVPLYGRG   +  E K S     VP
Subjt:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVP

Query:  RRPPP---SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN
        +RP      +  P    A++ L  SQ +H     SP      + Y+P + G  +S + SY      +++L+P + M GE V TR+FG+   +  +YP   
Subjt:  RRPPP---SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN

Query:  NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        N + G +  RMRR+ MQ DKSL R+  F  CC ++CLLLF
Subjt:  NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

AT4G03510.2 RING membrane-anchor 11.2e-4042.5Show/hide
Query:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVP
        ++S  S  ++D+N  FDCNICLDS  +PVVTLCGHL+CWPCI+KWL VQ   +S+E +  + CPVCK+ ++ S+LVPLYGRG   +  E K S     VP
Subjt:  SISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVP

Query:  RRPPP---SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN
        +RP      +  P    A++ L  SQ +H     SP      + Y+P + G  +S + SY      +++L+P + M GE V TR+FG+   +  +YP   
Subjt:  RRPPP---SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN

Query:  NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        N + G +  RMRR+ MQ DKSL R+  F  CC ++CLLLF
Subjt:  NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

AT4G27470.1 RING membrane-anchor 34.7e-5048.58Show/hide
Query:  KQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISS-NEPENTQNCPVCKASITPSSLVPLYGRGTSNSDS---ESKKS
        KQ     +A +    + +GCFDCNICLD+A DPVVTLCGHL+CWPCIYKWLHVQ+SS +  ++  NCPVCK++IT +SLVPLYGRG S+  S     K+ 
Subjt:  KQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISS-NEPENTQNCPVCKASITPSSLVPLYGRGTSNSDS---ESKKS

Query:  HLGMVVPRRPPPSMNTPPHSNATSALHPS---QELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNL
         L   +PRRP PS    P ++A S+L+PS   Q L P +        ++ QY P+    F +   + L NAV+ S L P IGMFG+ V+TRIFG+    +
Subjt:  HLGMVVPRRPPPSMNTPPHSNATSALHPS---QELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNL

Query:  LSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
            PY        S RM    MQ +KSLNRVSIF  CC I+CLLLF
Subjt:  LSYPPYNNSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

AT4G28270.1 RING membrane-anchor 21.7e-2833.62Show/hide
Query:  DANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNE-------PENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRRPPP
        D+ G FDCNICLD   DPVVTLCGHL+CWPCI+KW +   +S +             CPVCK+ ++ ++LVP+YGRG        K    G  VP R   
Subjt:  DANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNE-------PENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMVVPRRPPP

Query:  SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYNNSIPGNAS
                                   P+ P+Y  +   Q  G+  S    Y        + +P +G+  E V+ R+FG    N+  Y   N        
Subjt:  SMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYNNSIPGNAS

Query:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
         R RR+ MQ ++SL+RV +FL C   +CL LF
Subjt:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAAACTACTCTACACCTGAGGCATATTTAGAGTCTGAACAAGATGTCTCTCTCAAGCAAAACTGGAAATCTATCTCAGCCCAGTCGATGGTCTCCGAAGATGC
GAATGGTTGCTTCGATTGTAACATTTGCTTAGACTCAGCAGCTGACCCTGTTGTCACCCTCTGTGGTCACCTCTACTGCTGGCCGTGCATTTACAAATGGCTTCATGTAC
AAATCTCCAGCAACGAACCTGAAAACACACAGAACTGCCCCGTTTGTAAGGCTAGCATCACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCACGTCGAACTCAGAT
TCCGAATCCAAGAAGTCTCACTTGGGTATGGTCGTACCTCGAAGGCCACCACCCTCAATGAACACACCACCCCATTCCAATGCAACCTCTGCACTGCATCCTAGCCAGGA
GCTTCATCCAGATTATATCCGCTCGCCCTCGCAGCCAATCTATCACCAGCAATATTTCCCCCAGGCCTATGGTGACTTTGCCTCATATGCACCGTCTTATCTCGGTAATG
CCGTGATAACAAGTCTGCTAAACCCGACAATCGGGATGTTCGGGGAAACGGTATTCACTAGAATTTTCGGTAGCATGGATGGGAACTTGTTGTCGTACCCGCCTTACAAC
AACTCCATCCCAGGGAATGCAAGTAGCAGAATGAGAAGACAGGAAATGCAGCTGGATAAGTCTCTTAATAGAGTTTCCATCTTTCTATTTTGCTGCTTTATTATCTGTCT
TCTATTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
AATTCCCTTTTGTGTCAACATCTTTTTGCCTTCATTCCTCTCTTTGATTCCCGTCGGAGATTGTCGATCGAAACCTGTCGGATTCTTATTTAACGAACGTGATTCTTCCA
TGGAACAAAACTACTCTACACCTGAGGCATATTTAGAGTCTGAACAAGATGTCTCTCTCAAGCAAAACTGGAAATCTATCTCAGCCCAGTCGATGGTCTCCGAAGATGCG
AATGGTTGCTTCGATTGTAACATTTGCTTAGACTCAGCAGCTGACCCTGTTGTCACCCTCTGTGGTCACCTCTACTGCTGGCCGTGCATTTACAAATGGCTTCATGTACA
AATCTCCAGCAACGAACCTGAAAACACACAGAACTGCCCCGTTTGTAAGGCTAGCATCACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCACGTCGAACTCAGATT
CCGAATCCAAGAAGTCTCACTTGGGTATGGTCGTACCTCGAAGGCCACCACCCTCAATGAACACACCACCCCATTCCAATGCAACCTCTGCACTGCATCCTAGCCAGGAG
CTTCATCCAGATTATATCCGCTCGCCCTCGCAGCCAATCTATCACCAGCAATATTTCCCCCAGGCCTATGGTGACTTTGCCTCATATGCACCGTCTTATCTCGGTAATGC
CGTGATAACAAGTCTGCTAAACCCGACAATCGGGATGTTCGGGGAAACGGTATTCACTAGAATTTTCGGTAGCATGGATGGGAACTTGTTGTCGTACCCGCCTTACAACA
ACTCCATCCCAGGGAATGCAAGTAGCAGAATGAGAAGACAGGAAATGCAGCTGGATAAGTCTCTTAATAGAGTTTCCATCTTTCTATTTTGCTGCTTTATTATCTGTCTT
CTATTGTTTTGAACTGGGCAATAGATGTTGTATGGAGAACCATATGATATAAAGATAAGCCAGCTAGAATTTTGCTAGATGATTTTACTCTGAGAAGTCATCTATGTACA
GAAGGTTTAGCTAATATCACATATTATTTTGTAATTTCTTTTGGTTTTTGTGTGGATGGCATGTTTATATATAATACTACCCCCTGTTTTTCCACCCCAGAAAATAATTT
ATCATATCAAAATAATATAAAGTCTAATTCTAATTTTATTTTTGTTTCAGATATTGTTGACACCGGTATATAAGTCATGTTAATAAGTTGGAACTCTTTGCAATGGATGG
TATGATTTCGAGTTAACAAATTCAATGGAGTTGGAGC
Protein sequenceShow/hide protein sequence
MEQNYSTPEAYLESEQDVSLKQNWKSISAQSMVSEDANGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSD
SESKKSHLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPDYIRSPSQPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSMDGNLLSYPPYN
NSIPGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF