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Tan0009647 (gene) of Snake gourd v1 genome

Gene IDTan0009647
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG01:46592670..46592891
RNA-Seq ExpressionTan0009647
SyntenyTan0009647
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035138.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.3e-1764.29Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA ++W  FS+LV TALRVE+S+ +++
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.3e-1768.18Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W +FSKLV  ALRVE+SL
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
KAA0057197.1 gag/pol protein [Cucumis melo var. makuwa]5.3e-1762.86Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
        ++++EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W  FS+LV TALRVE+S+V+++
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]4.0e-1768.18Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA ++W +FSKLV  ALRVE+SL
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
XP_008464978.1 PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo]5.3e-1762.86Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
        ++++EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W  FS+LV TALRVE+S+V+++
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
TrEMBL top hitse value%identityAlignment
A0A5A7SX06 DNA/RNA polymerases superfamily protein2.6e-1764.29Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA ++W  FS+LV TALRVE+S+ +++
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
A0A5A7URC7 Gag/pol protein2.6e-1762.86Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
        ++++EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W  FS+LV TALRVE+S+V+++
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
A0A5A7UZM6 Gag protease polyprotein-like protein2.0e-1768.18Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA ++W +FSKLV  ALRVE+SL
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
A0A5D3BB91 Reverse transcriptase2.6e-1768.18Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W +FSKLV  ALRVE+SL
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSL
A0A5D3D5E2 Gag/pol protein2.6e-1762.86Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
        ++++EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W  FS+LV TALRVE+S+V+++
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAGAGGTTCGAGGATGGTTTACGAGC
AGAGATCCGAACACCTGTGACAGCAAGTTCTGAGTGGGCTGAGTTCTCCAAGCTTGTGGGGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAGAGGTTCGAGGATGGTTTACGAGC
AGAGATCCGAACACCTGTGACAGCAAGTTCTGAGTGGGCTGAGTTCTCCAAGCTTGTGGGGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAT
GA
Protein sequenceShow/hide protein sequence
MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVGTALRVERSLVDDRMGK