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Tan0009648 (gene) of Snake gourd v1 genome

Gene IDTan0009648
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG09:30863250..30867065
RNA-Seq ExpressionTan0009648
SyntenyTan0009648
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017217082.1 PREDICTED: uncharacterized protein LOC108194640 [Daucus carota subsp. sativus]3.3e-0939.66Show/hide
Query:  NHSSPFLQSLLGSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRK
        N      Q L+G  A  L  +   K   L+  I   K+ I D     TP  +  IK  E  L   L +EE+Y +QRSR  WLK  D+NT++FHH+AS RK
Subjt:  NHSSPFLQSLLGSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRK

Query:  RKNTIKRISNTTGAWQ
        +KN IK + +  G WQ
Subjt:  RKNTIKRISNTTGAWQ

XP_022158772.1 uncharacterized protein LOC111025237 [Momordica charantia]1.6e-0848.65Show/hide
Query:  PTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQDNPR
        P PL+F +I  +E +L   L  EEI+ KQRSRE+WLKW D N KWFH +A+ RK  N I  I +  G W + P+
Subjt:  PTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQDNPR

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]9.5e-0933.12Show/hide
Query:  LSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPL-NFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQ
        L  + R +  G K ++ +LK+ + +     T     + IKS E  +E  LL+EE+Y KQRSR +WLK  D+NTK+FH +AS RKRKN I  + +    W 
Subjt:  LSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPL-NFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQ

Query:  DNPRLDQVGSWEHNYARWNSLIPAFRETKGVVP-LK-EVTFETFLQVLSPLAHDLVN
        D+    +    E+  + + +  P+ ++ +  +  LK  VT E   Q+ SP   + V+
Subjt:  DNPRLDQVGSWEHNYARWNSLIPAFRETKGVVP-LK-EVTFETFLQVLSPLAHDLVN

XP_030497559.1 uncharacterized protein LOC115713217 [Cannabis sativa]1.1e-0938.14Show/hide
Query:  NHSSPFLQSLLGSRANLLSSY--GRKKNSGLKPEICRLKQCIQDAY--AQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRA
        N S P LQS L  +++ +S      K    +K +I R +  + +    +QPTP   + + +L++ L+  L++EE+Y KQRSR +WL+  D+NTK+FHHRA
Subjt:  NHSSPFLQSLLGSRANLLSSY--GRKKNSGLKPEICRLKQCIQDAY--AQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRA

Query:  SGRKRKNTIKRISNTTGA
        S RK+ N I++I+   G+
Subjt:  SGRKRKNTIKRISNTTGA

XP_034696393.1 uncharacterized protein LOC117922369 [Vitis riparia]1.2e-0834.4Show/hide
Query:  SPFLQSLLG---SRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRK
        SP  +SL+    + +  L  +GR+     K +I   K+CI+    +  P N  V+K+ +  L + L++EE + KQR++ +WL+  D NT +FH  AS RK
Subjt:  SPFLQSLLG---SRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRK

Query:  RKNTIKRISNTTGA-WQDNPRLDQV
        R N I ++ +  G  W+D P L +V
Subjt:  RKNTIKRISNTTGA-WQDNPRLDQV

TrEMBL top hitse value%identityAlignment
A0A803P3X4 Uncharacterized protein6.2e-1443.56Show/hide
Query:  YGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQDNPR
        + +KK  GL  EI + K+ + +   Q  P  + +I+ +E  L   L ++E YR+QRSR  WLKW DRNTK+FHH+AS R++KN IK + +  G WQD+  
Subjt:  YGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQDNPR

Query:  L
        L
Subjt:  L

A0A803PI64 Uncharacterized protein1.1e-1035.62Show/hide
Query:  GSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNT
        G     L S+ RKK   L  +I +LK  + +  +   P  +  +K +E  L + L ++E Y +QRSR  WLKW D NTK+FH +AS R++KN IK + + 
Subjt:  GSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNT

Query:  TGAWQDNPRLDQVGSWEHNYARWN----SLIP--AFRETKGVVPLK
         G W     +  V     NY  WN    S +P   F E   V+P K
Subjt:  TGAWQDNPRLDQVGSWEHNYARWN----SLIP--AFRETKGVVPLK

A0A803PV25 Uncharacterized protein1.4e-1342.57Show/hide
Query:  LSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQD
        L ++ RKK S L  E+ +LK+ + +      P  +  I+ +EA L   L ++E Y +QRSR  WL+W DRNTK+FHH+AS R++KN IK + +  G WQD
Subjt:  LSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQD

Query:  N
        +
Subjt:  N

A0A803PWX1 Uncharacterized protein1.2e-1240.38Show/hide
Query:  LSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQD
        L  + +KK + L  EI + K+ + +   Q  P  +  I+ +E  L   L ++E Y +QRSR  WL+W DRNTK+FHH+AS R++KN IK + +  G WQD
Subjt:  LSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQD

Query:  NPRL
        +  L
Subjt:  NPRL

A0A803PYI0 Uncharacterized protein5.4e-1034.27Show/hide
Query:  GSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNT
        G     L S+ RKK   L  +I +LK  + +  +   P  +  +K +E  L + L ++E Y  Q SR  WLKW D NTK+FH +AS R++KN IK + + 
Subjt:  GSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLESKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNT

Query:  TGAWQDNPRLDQ--VGSWEHNYARWNSL-IPAFRETKGVVPLK
         G W     + Q  V ++  N  R +S+    F E   V+P K
Subjt:  TGAWQDNPRLDQ--VGSWEHNYARWNSL-IPAFRETKGVVPLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACTCTTTGTTGGAATGTTCGAGGGTTGGGGAGCGACGAATTATCTCGCTATAATCCTCATTTATGTTTTTTGTTGGAAATGAAAAGTTGGTGTTTCACTGGTCT
GTATGGTCAGCCGATTCAGGGTCTACGTTTGAACCATTCCAGCCCGTTTTTGCAATCGTTGTTAGGGTCGAGAGCAAATTTGTTAAGTTCATACGGCAGAAAAAAGAACA
GTGGTTTGAAACCGGAGATATGCAGACTTAAACAATGTATTCAGGATGCCTATGCTCAACCTACACCTTTAAACTTCAACGTCATCAAGTCTCTTGAAGCCAATCTTGAG
AGCAAGCTGCTTGAGGAAGAGATTTACAGGAAACAGAGATCGAGAGAAAACTGGTTAAAATGGAGGGATAGAAATACCAAGTGGTTTCACCATAGGGCTTCAGGGAGAAA
GAGGAAAAATACGATCAAAAGAATTTCAAATACCACGGGGGCATGGCAGGATAACCCAAGATTGGACCAAGTAGGGAGCTGGGAACATAACTACGCGAGATGGAATTCAC
TCATTCCTGCCTTTAGGGAAACTAAAGGGGTTGTTCCCTTAAAAGAAGTTACCTTTGAAACCTTTCTTCAAGTGCTCTCTCCACTGGCCCACGATCTCGTAAACAAGAAC
TCCAACGTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATACTCTTTGTTGGAATGTTCGAGGGTTGGGGAGCGACGAATTATCTCGCTATAATCCTCATTTATGTTTTTTGTTGGAAATGAAAAGTTGGTGTTTCACTGGTCT
GTATGGTCAGCCGATTCAGGGTCTACGTTTGAACCATTCCAGCCCGTTTTTGCAATCGTTGTTAGGGTCGAGAGCAAATTTGTTAAGTTCATACGGCAGAAAAAAGAACA
GTGGTTTGAAACCGGAGATATGCAGACTTAAACAATGTATTCAGGATGCCTATGCTCAACCTACACCTTTAAACTTCAACGTCATCAAGTCTCTTGAAGCCAATCTTGAG
AGCAAGCTGCTTGAGGAAGAGATTTACAGGAAACAGAGATCGAGAGAAAACTGGTTAAAATGGAGGGATAGAAATACCAAGTGGTTTCACCATAGGGCTTCAGGGAGAAA
GAGGAAAAATACGATCAAAAGAATTTCAAATACCACGGGGGCATGGCAGGATAACCCAAGATTGGACCAAGTAGGGAGCTGGGAACATAACTACGCGAGATGGAATTCAC
TCATTCCTGCCTTTAGGGAAACTAAAGGGGTTGTTCCCTTAAAAGAAGTTACCTTTGAAACCTTTCTTCAAGTGCTCTCTCCACTGGCCCACGATCTCGTAAACAAGAAC
TCCAACGTGAGATGA
Protein sequenceShow/hide protein sequence
MNTLCWNVRGLGSDELSRYNPHLCFLLEMKSWCFTGLYGQPIQGLRLNHSSPFLQSLLGSRANLLSSYGRKKNSGLKPEICRLKQCIQDAYAQPTPLNFNVIKSLEANLE
SKLLEEEIYRKQRSRENWLKWRDRNTKWFHHRASGRKRKNTIKRISNTTGAWQDNPRLDQVGSWEHNYARWNSLIPAFRETKGVVPLKEVTFETFLQVLSPLAHDLVNKN
SNVR