; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009680 (gene) of Snake gourd v1 genome

Gene IDTan0009680
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionexosome complex component RRP4 homolog
Genome locationLG09:49035493..49051966
RNA-Seq ExpressionTan0009680
SyntenyTan0009680
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-17094.8Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEGS  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI++TVSLSISLNIDV
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKKRG
        HEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKKRG

KAG7036378.1 Exosome complex component RRP4-like protein [Cucurbita argyrosperma subsp. argyrosperma]6.6e-16891.18Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRA-------------RY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGE+VATICGVVERVNKLIYVR LRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRA-------------RY

Query:  KPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDI+VGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIV
        LVKRRKQHFHHLEQYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEGS  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI+
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIV

Query:  DTVSLSISLNIDVHEMLGSEFCVLTAEKEAERRGSSKKRG
        +TVSLSISLNIDVHEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  DTVSLSISLNIDVHEMLGSEFCVLTAEKEAERRGSSKKRG

XP_022931250.1 exosome complex component RRP4 homolog [Cucurbita moschata]1.6e-16994.77Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEGS  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI++TVSLSISLNIDV
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKK
        HEMLGSEFCVLTAEKEAERR SSKK
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKK

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]9.2e-17094.5Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDL GE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEGS  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI++TVSLSISLNIDV
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKKRG
        HEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]7.0e-17094.19Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEG+  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI++TVSL ISLNIDV
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKKRG
        HEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKKRG

TrEMBL top hitse value%identityAlignment
A0A6J1DNK7 exosome complex component RRP4 homolog isoform X26.7e-15886.89Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GE+VAT+CGVVERVNKLIYVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVN-QVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNID
        QYGIDLILGCNGF+WIGEHVDP EDMM++DQ+NK EQKG K EG+  N + QER+YTPLETR+ ICR ANA+RVLS LGFI+TVEVI++TV+LS+SLNID
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVN-QVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNID

Query:  VHEMLGSEFCVLTAEKEAERRGSSKKRG
        VHEMLGSEFCVL AE E ERR SSKKRG
Subjt:  VHEMLGSEFCVLTAEKEAERRGSSKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog7.6e-17094.77Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEGS  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI++TVSLSISLNIDV
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKK
        HEMLGSEFCVLTAEKEAERR SSKK
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X16.0e-16792.05Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLI GCNGF+WIGEHVDPTEDMM++DQ+NKSEQKGSKFEG+  NQVQER+YTPLETRQ ICR ANAIRVLS LGFIMTVEVI++TVSLS SLNI+V
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKKRG
        HEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKKRG

A0A6J1HVC7 exosome complex component RRP4 homolog isoform X11.5e-16289.91Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MR LQ+SLNQTQ+IRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGE+VATICGVVER+NKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRR+TA DELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGK+ERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLI GCNGF+ IGE VDPTEDMM++DQ+NKSEQKGSKFEG+  NQVQER+YTPLETRQ ICR ANAIRVLS LGFIMTVEVI++TVSLS+SLNI+V
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKKRG
        HEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog4.4e-17094.5Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDL GE+VATICGVVERVNKLIYVR LRARYKPEVGDI+VGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV
        QYGIDLILGCNGF+WIGEHVDPTEDMMV+D INKSEQKGSKFEGS  NQVQER+YTPLETRQ ICR ANAIRVLS+LGFIM+VEVI++TVSLSISLNIDV
Subjt:  QYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRGSSKKRG
        HEMLGSEFCVLTAEKEAERR SSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRGSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp43.6e-4442.58Show/hide
Query:  LKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G I A++ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQ
        ++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG+VW+ +H    E+      I + E++ S+   S  N 
Subjt:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQ

Query:  VQERMYTPLE-TRQIICRIANAIRVL-----SVLGFIMTVEVIVDTVSLSISLNID
          +  YT L  +R  IC    A R L     S+  F  +  V  +   L++  N+D
Subjt:  VQERMYTPLE-TRQIICRIANAIRVL-----SVLGFIMTVEVIVDTVSLSISLNID

Q13868 Exosome complex component RRP42.8e-4450.24Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A + L     +      VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+ L+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFVWI
        GF+WI
Subjt:  GFVWI

Q2KID0 Exosome complex component RRP44.3e-4543.85Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A + L     + +    VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+ L+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAI
        GF+W    V PT +   DD             G  +  ++      L  R++I R+ N I
Subjt:  GFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAI

Q8VBV3 Exosome complex component RRP41.5e-4549.77Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL +A + L     + +    VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+ L+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFVWI---GEHVD
        GF+WI    EH D
Subjt:  GFVWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog3.1e-12066.67Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASV+V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNID
        E  GIDLI+GCNGF+W+GEHV+  + M +DDQ    E   S   G      +E+ + PLETRQ ICRI NAIRVLS LGF +T+EVI++TV+LS S NID
Subjt:  EQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNID

Query:  VHEMLGSEFCVLTAEKEAERRGSSKKR
        +H+MLGSEF V+ AE EAERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEAERRGSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 42.2e-12166.67Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASV+V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNID
        E  GIDLI+GCNGF+W+GEHV+  + M +DDQ    E   S   G      +E+ + PLETRQ ICRI NAIRVLS LGF +T+EVI++TV+LS S NID
Subjt:  EQYGIDLILGCNGFVWIGEHVDPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNID

Query:  VHEMLGSEFCVLTAEKEAERRGSSKKR
        +H+MLGSEF V+ AE EAERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEAERRGSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGATTACAGGTTTCCTTGAATCAAACCCAGAAGATTCGACTTCAAAGAGCCCTAGAAACGCTTGAGTCTATCTCTTCGAAAGCCAATTCTGATGCTTCTGTTGT
AGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGGACCCTCGACTTGAATGGAGAAATAGTTGCCACTATTTGTGGAGTGGTTGAGCGAG
TCAATAAGCTTATCTATGTACGTGGCTTACGTGCCAGATATAAACCGGAGGTTGGTGATATTGTAGTGGGCCGTGTTACGGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATAAATTATAGTCAAGATGCTGTTTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTGGATGAACTCAACATGCGAAGTATTTTTGA
AGAAAATGATGTTATTTGCGCGGAAGTTCGTGGATTCCAGCATGATGGCCTACACCTTCAAGCAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGCTGCTCACAG
TATCACCATATCTAGTAAAGAGACGTAAACAACACTTTCATCATTTGGAGCAGTATGGTATTGATTTAATACTTGGATGCAATGGGTTTGTGTGGATTGGGGAGCATGTT
GATCCCACAGAGGATATGATGGTAGACGATCAAATTAATAAATCTGAACAAAAGGGTTCAAAATTTGAAGGAAGTCTTGTTAATCAAGTGCAAGAAAGAATGTATACTCC
ATTAGAGACACGTCAGATTATATGCAGAATTGCAAATGCTATTCGAGTATTGTCTGTCTTAGGTTTCATAATGACAGTAGAAGTCATAGTGGACACAGTTAGTCTAAGTA
TTTCTCTAAACATAGATGTGCATGAAATGCTTGGTTCGGAGTTCTGTGTTCTCACTGCAGAAAAAGAGGCTGAGCGACGGGGTTCGAGTAAGAAGAGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATTAAATAAAGAAATTTTCAGTTGAGGAAAAGATTTTATTTGGTTAAAAAAAAAGAATTCGAAAACCCTCGGCGTGCGACCCCTCCCTCCCAACTCTTCTTCTTCTTCCT
CGTACCGCAACCCTTCAGCATCCCTCTCCTTCACCGCCGGCGAACCTTCGACTCTCGTCCCCGATTCCAGTCGCCGTCGTTCCGTCCGCCTTCAACGAAGCCGACGTTCA
GCGACTCCGACCGCCGCGCGTCTCCCTCTTCTTTTCTTCGGTTCTTCAACCCAAAGTAATTTTGGATATGAGAGGATTACAGGTTTCCTTGAATCAAACCCAGAAGATTC
GACTTCAAAGAGCCCTAGAAACGCTTGAGTCTATCTCTTCGAAAGCCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTC
AAGGGACATGGGACCCTCGACTTGAATGGAGAAATAGTTGCCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGGCTTACGTGCCAGATATAA
ACCGGAGGTTGGTGATATTGTAGTGGGCCGTGTTACGGAGGTTGCTCCAAAACGTTGGAGATTGGATATAAATTATAGTCAAGATGCTGTTTTGATGCTTTCTTCAATGA
ACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTGGATGAACTCAACATGCGAAGTATTTTTGAAGAAAATGATGTTATTTGCGCGGAAGTTCGTGGATTCCAGCAT
GATGGCCTACACCTTCAAGCAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGCTGCTCACAGTATCACCATATCTAGTAAAGAGACGTAAACAACACTTTCATCA
TTTGGAGCAGTATGGTATTGATTTAATACTTGGATGCAATGGGTTTGTGTGGATTGGGGAGCATGTTGATCCCACAGAGGATATGATGGTAGACGATCAAATTAATAAAT
CTGAACAAAAGGGTTCAAAATTTGAAGGAAGTCTTGTTAATCAAGTGCAAGAAAGAATGTATACTCCATTAGAGACACGTCAGATTATATGCAGAATTGCAAATGCTATT
CGAGTATTGTCTGTCTTAGGTTTCATAATGACAGTAGAAGTCATAGTGGACACAGTTAGTCTAAGTATTTCTCTAAACATAGATGTGCATGAAATGCTTGGTTCGGAGTT
CTGTGTTCTCACTGCAGAAAAAGAGGCTGAGCGACGGGGTTCGAGTAAGAAGAGGGGGTGATTTGGTTTTCAAAATTGTTAGTAATTAATGAACAATTTGATTTGCAGAG
GAACTCACAATTACATTGTAGTTTGTGGAATTTTATGTTACCACCACTTGGTCTGCTAGTGTTAACATGGCTCTCTCTAAAAGTTTACTGGACCAACTTCCTA
Protein sequenceShow/hide protein sequence
MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEIVATICGVVERVNKLIYVRGLRARYKPEVGDIVVGRVTEVAPKRWRLD
INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFVWIGEHV
DPTEDMMVDDQINKSEQKGSKFEGSLVNQVQERMYTPLETRQIICRIANAIRVLSVLGFIMTVEVIVDTVSLSISLNIDVHEMLGSEFCVLTAEKEAERRGSSKKRG