; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009683 (gene) of Snake gourd v1 genome

Gene IDTan0009683
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationLG10:47123376..47123810
RNA-Seq ExpressionTan0009683
SyntenyTan0009683
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]1.1e-3796.55Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGK TGFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]5.5e-3795.4Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPT K TGFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]6.0e-3694.25Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT K TGFS+STDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022974055.1 uncharacterized protein LOC111472683 [Cucurbita maxima]3.0e-3593.1Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPTG  TGFS+STDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_023536368.1 uncharacterized protein LOC111797558 [Cucurbita pepo subsp. pepo]7.1e-3795.4Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPTGK TGFS+STDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein2.6e-3795.4Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPT K TGFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A2P5BV48 Uncharacterized protein5.3e-3079.31Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKS+SFP+YSS+ SGEFGF+ RSNSYNFNGP  KG+GF +S+DPELQRK+RIASYNVF ME KVKSSV+NSFKWIK+KFSDIRYG+
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 85.3e-3896.55Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGK TGFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366832.9e-3694.25Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT K TGFS+STDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726831.5e-3593.1Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPTG  TGFS+STDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)5.7e-0839Show/hide
Query:  EKSKSFP----------KYSSSTSGEFGFQT----RSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        EKS+S P           YS+ST   +   T     SN+ +      K  GF    + E+QRK+R+ASYNV+ +E +VK S+K SFKW K   S+  YGL
Subjt:  EKSKSFP----------KYSSSTSGEFGFQT----RSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT2G19460.1 Protein of unknown function (DUF3511)1.1e-0651.02Show/hide
Query:  KGTGFSSST----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK
        KG   SSS+    DP+LQRK+R+ SY  + +E K+K S + SFKWIK K
Subjt:  KGTGFSSST----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK

AT3G05725.1 Protein of unknown function (DUF3511)1.1e-0645.45Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        DPE++RKRR+A Y +++ E K+K +++ S+KWIK + S I +G+
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT4G09890.1 Protein of unknown function (DUF3511)4.6e-1855.91Show/hide
Query:  MEKSKSFPKYSSS-TSGEFGF-QTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL
        M+ SKS+ +YSSS ++ EFG+ Q RSNSYNFNGP         +TDPE++RK+R+ASYN+F  E K+KS++KNSFKWIK KFS     IRY +
Subjt:  MEKSKSFPKYSSS-TSGEFGF-QTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL

AT5G11970.1 Protein of unknown function (DUF3511)1.5e-0838.82Show/hide
Query:  YSSSTSGEF-----GFQTRSNSYNFNGPTGKGTGFSSS---TDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG
        Y  +  G+F      + TR N+  ++    K    S S   TDPELQRK+R+ASY ++ +E KVK S +NSF+W+K +++ + YG
Subjt:  YSSSTSGEF-----GFQTRSNSYNFNGPTGKGTGFSSS---TDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAATCATTCCCCAAGTACTCGTCCTCGACTTCGGGCGAGTTCGGTTTTCAAACCCGATCCAACTCGTACAATTTCAACGGCCCGACTGGGAAGGGGAC
CGGGTTTTCGTCCTCGACCGATCCCGAGCTCCAAAGGAAGAGAAGGATTGCCTCTTATAATGTTTTCAATATGGAAAACAAGGTCAAGTCCAGTGTAAAGAACAGCTTCA
AGTGGATCAAAACAAAGTTTAGTGACATTCGCTATGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
GAGAAGAGAGGAGAAAAGGAAAGAAGAAAAGAATAGAAGCTCTGCCAAGGTAATTCCAGGCTATGGAGAAGAGCAAATCATTCCCCAAGTACTCGTCCTCGACTTCGGGC
GAGTTCGGTTTTCAAACCCGATCCAACTCGTACAATTTCAACGGCCCGACTGGGAAGGGGACCGGGTTTTCGTCCTCGACCGATCCCGAGCTCCAAAGGAAGAGAAGGAT
TGCCTCTTATAATGTTTTCAATATGGAAAACAAGGTCAAGTCCAGTGTAAAGAACAGCTTCAAGTGGATCAAAACAAAGTTTAGTGACATTCGCTATGGTTTGTGAGTTT
ATGAATTAAGGGTTTTGTTTCTTTTTCTTTTTTCTTCTTTGTGTAAACAGTTTGCCATTTGCTGCCTTTAAAGGCTTCCAACCAAATTGAAGATATATTTCAAGA
Protein sequenceShow/hide protein sequence
MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGTGFSSSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL