; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009700 (gene) of Snake gourd v1 genome

Gene IDTan0009700
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAlba domain-containing protein
Genome locationLG10:6091258..6092098
RNA-Seq ExpressionTan0009700
SyntenyTan0009700
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438573.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]3.0e-5986.49Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        M+SG VVSE T EVKNEI+NE+EKLLV  PD EVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +KNLTISSVSL NGEN +LV KPKIEIALVNAEKIKNI+TA TSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

XP_022147424.1 uncharacterized protein At2g34160-like [Momordica charantia]7.1e-6190.6Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MES  VVSE  TEVK+EIRNE+EKLLVV PDG+VKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSEDC
        A EKNLTISSVSL NGEN+RLV KPKIEIALVNAEK KNI TATTSEDC
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSEDC

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]4.6e-6087.16Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MESG VVSE  +E+KNEIRNE+EKLLVV PDGEVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +K LTISSVSL NGEN+RLV KPKIEIAL+NAEK+K I+TATTSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]4.6e-6087.84Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MESG VVSE T+EVKNEIRNE+EKLLVV PD EVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +K LTISSVSL NGEN+RLV KPKIEIAL+NAEK+K I+TATTSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]2.3e-5987.16Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MESG VVSEGT EVKNEIR+E+EKLLVV  DGEVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +K LTISSVSL  GEN++LV KPKIEIALVNAEKIKNI+TA TSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

TrEMBL top hitse value%identityAlignment
A0A1S3AXD3 uncharacterized protein At2g34160-like1.4e-5986.49Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        M+SG VVSE T EVKNEI+NE+EKLLV  PD EVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +KNLTISSVSL NGEN +LV KPKIEIALVNAEKIKNI+TA TSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

A0A5D3CZ81 Alba DNA/RNA-binding protein1.4e-5986.49Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        M+SG VVSE T EVKNEI+NE+EKLLV  PD EVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +KNLTISSVSL NGEN +LV KPKIEIALVNAEKIKNI+TA TSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

A0A6J1D0Y9 uncharacterized protein At2g34160-like3.4e-6190.6Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MES  VVSE  TEVK+EIRNE+EKLLVV PDG+VKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSEDC
        A EKNLTISSVSL NGEN+RLV KPKIEIALVNAEK KNI TATTSEDC
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSEDC

A0A6J1EFH1 uncharacterized protein At2g34160-like2.2e-6087.16Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MESG VVSE  +E+KNEIRNE+EKLLVV PDGEVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +K LTISSVSL NGEN+RLV KPKIEIAL+NAEK+K I+TATTSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

A0A6J1IXN8 uncharacterized protein At2g34160-like2.2e-6087.84Show/hide
Query:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MESG VVSE T+EVKNEIRNE+EKLLVV PD EVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED
        A +K LTISSVSL NGEN+RLV KPKIEIAL+NAEK+K I+TATTSED
Subjt:  ALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSED

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341603.2e-2457.28Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QYN+VELSALGMAI TVVT+ EILK NG A+EK +  S+V + +    R V+K KIEI LV +EK   +  A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTAT

Query:  TSE
          E
Subjt:  TSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein8.8e-2556.31Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QY +VELSALGMAI TVVT+AEILK NG A+EK +  S+V + +    R V+K KIEI L  +EK   +  A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTAT

Query:  TSE
          E
Subjt:  TSE

AT2G34160.1 Alba DNA/RNA-binding protein2.3e-2557.28Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QYN+VELSALGMAI TVVT+ EILK NG A+EK +  S+V + +    R V+K KIEI LV +EK   +  A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLVRKPKIEIALVNAEKIKNITTAT

Query:  TSE
          E
Subjt:  TSE

AT3G04620.1 Alba DNA/RNA-binding protein2.6e-2450.81Show/hide
Query:  EKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLV
        E+ +V+ P        V T    KKN+IQVSN KKP F+Y NL+KRYI+Q+NEVELSALGMAI TVVTI+EILK NGLA EK +  S+V + +    ++V
Subjt:  EKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISSVSLNNGENERLV

Query:  RKPKIEIALVNAEKIKNITTATTS
        +K KIEI L  ++K  ++    T+
Subjt:  RKPKIEIALVNAEKIKNITTATTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCGGCAAGGTTGTCTCCGAAGGCACTACTGAGGTCAAGAATGAAATCCGCAATGAGGACGAAAAGCTCCTCGTCGTTGTCCCCGATGGTGAGGTTAAGGAGAT
TGCCGTTTTAACCGAGTTTAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCATTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGTACA
ATGAAGTTGAGCTCTCTGCCTTAGGAATGGCTATACCTACTGTCGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTGGAAAAGAACTTAACGATATCTTCT
GTCAGTTTGAATAATGGGGAAAATGAAAGGCTGGTTAGGAAACCTAAGATTGAGATTGCACTGGTAAATGCAGAGAAGATCAAGAACATTACGACTGCTACAACAAGTGA
GGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCGGCAAGGTTGTCTCCGAAGGCACTACTGAGGTCAAGAATGAAATCCGCAATGAGGACGAAAAGCTCCTCGTCGTTGTCCCCGATGGTGAGGTTAAGGAGAT
TGCCGTTTTAACCGAGTTTAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCATTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGTACA
ATGAAGTTGAGCTCTCTGCCTTAGGAATGGCTATACCTACTGTCGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTGGAAAAGAACTTAACGATATCTTCT
GTCAGTTTGAATAATGGGGAAAATGAAAGGCTGGTTAGGAAACCTAAGATTGAGATTGCACTGGTAAATGCAGAGAAGATCAAGAACATTACGACTGCTACAACAAGTGA
GGATTGTTGA
Protein sequenceShow/hide protein sequence
MESGKVVSEGTTEVKNEIRNEDEKLLVVVPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLALEKNLTISS
VSLNNGENERLVRKPKIEIALVNAEKIKNITTATTSEDC