; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009718 (gene) of Snake gourd v1 genome

Gene IDTan0009718
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG04:16524790..16526984
RNA-Seq ExpressionTan0009718
SyntenyTan0009718
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]4.4e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPK TRGG FYDPK++KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
KAA0059681.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-1185Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPKE+RGGLFYDP+E+KVFVSTN+IFL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
TYJ96633.1 gag/pol protein [Cucumis melo var. makuwa]4.4e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPK TRGG FYDPK++KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]4.4e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPK TRGG FYDPK++KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
TYK03644.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPKE++GGLFYDP+E+KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.1e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPK TRGG FYDPK++KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
A0A5A7V4M1 Gag/pol protein2.1e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPK TRGG FYDPK++KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
A0A5D3BX45 Gag/pol protein7.3e-1182.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPKE++GGLFYDP+E+KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
A0A5D3CPJ6 Gag/pol protein2.1e-1082.5Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPK TRGG FYDPK++KVFVSTNA FL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
A0A5D3DRU1 Gag/pol protein1.9e-1185Show/hide
Query:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
        KL+ RSKLCLFVGYPKE+RGGLFYDP+E+KVFVSTN+IFL
Subjt:  KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGAAGGCAGAAGACAGAAATTTGCTGTCAAATCCAAGAAGTCTCTGGTTTTTTGATTCAGAAGTTAGTTCCTGGGAAAGAAGTTTTCGAGGTAGTTTTGAACA
AATCCGTTGGGAATCTCAATTTCATACAAGAAGAAATAGGTCAAGTGTACGGGTCAAGACTCTAGTAGAGATCGAGCTCCCGGTGCCTGATAACCTGCCATATTTAGTAT
GCTTACCAGGTAAAACAGGATCAACAGGTATCGTTAGAGAGGTGAACGATGTCTTTTGGCTTCACGCCGTCTACCGGGCTAAGTTAGTAGGTAGTTCGGGAGGGGGTAAG
TTGGATTCACGTTCAAAGTTATGCCTATTCGTAGGATACCCAAAAGAAACAAGAGGTGGTTTATTCTATGATCCTAAGGAAGATAAGGTTTTTGTGTCAACAAATGCCAT
TTTCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGAAGGCAGAAGACAGAAATTTGCTGTCAAATCCAAGAAGTCTCTGGTTTTTTGATTCAGAAGTTAGTTCCTGGGAAAGAAGTTTTCGAGGTAGTTTTGAACA
AATCCGTTGGGAATCTCAATTTCATACAAGAAGAAATAGGTCAAGTGTACGGGTCAAGACTCTAGTAGAGATCGAGCTCCCGGTGCCTGATAACCTGCCATATTTAGTAT
GCTTACCAGGTAAAACAGGATCAACAGGTATCGTTAGAGAGGTGAACGATGTCTTTTGGCTTCACGCCGTCTACCGGGCTAAGTTAGTAGGTAGTTCGGGAGGGGGTAAG
TTGGATTCACGTTCAAAGTTATGCCTATTCGTAGGATACCCAAAAGAAACAAGAGGTGGTTTATTCTATGATCCTAAGGAAGATAAGGTTTTTGTGTCAACAAATGCCAT
TTTCTTATAG
Protein sequenceShow/hide protein sequence
MKRKAEDRNLLSNPRSLWFFDSEVSSWERSFRGSFEQIRWESQFHTRRNRSSVRVKTLVEIELPVPDNLPYLVCLPGKTGSTGIVREVNDVFWLHAVYRAKLVGSSGGGK
LDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAIFL