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Tan0009721 (gene) of Snake gourd v1 genome

Gene IDTan0009721
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 9
Genome locationLG01:72033654..72033881
RNA-Seq ExpressionTan0009721
SyntenyTan0009721
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]3.6e-1356Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS
        M + K  T +F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HPELC     NPYQRGC+ IDRCR G+
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]5.6e-1464.18Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        KGS  +F+GIL V    IEITNA  YI Y  LK D+SPGCS KHP LC   E N YQRGCSAI+RCR
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]4.4e-1966.22Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS
        MAI KGS FIFVGIL  C+  I+ITNA  +I Y PL+GD+SPGCS  HPELC     NPY+RGC++IDRCRGGS
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS

XP_022942029.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]1.1e-1250.68Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG
        MAI   +  +  G LF+CID + IT  NAN I+Y  ++ D+SPGC+ KHP LC   + NPY+RGC+AI++CRG
Subjt:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]6.9e-1257.35Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG
        KG+  IF+ +LFV I+ IEITNA +YI Y PLK +    CS  HP+LC     NPYQRGC+ IDRCRG
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein1.8e-1356Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS
        M + K  T +F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HPELC     NPYQRGC+ IDRCR G+
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS

A0A6J1C8U5 uncharacterized protein LOC1110084952.7e-1464.18Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        KGS  +F+GIL V    IEITNA  YI Y  LK D+SPGCS KHP LC   E N YQRGCSAI+RCR
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

A0A6J1DYH7 uncharacterized protein LOC1110257772.1e-1966.22Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS
        MAI KGS FIFVGIL  C+  I+ITNA  +I Y PL+GD+SPGCS  HPELC     NPY+RGC++IDRCRGGS
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGS

A0A6J1FQ53 auxin-induced in root cultures protein 12-like5.1e-1350.68Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG
        MAI   +  +  G LF+CID + IT  NAN I+Y  ++ D+SPGC+ KHP LC   + NPY+RGC+AI++CRG
Subjt:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG

A0A6J1HAJ8 protein RALF-like 93.3e-1257.35Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG
        KG+  IF+ +LFV I+ IEITNA +YI Y PLK +    CS  HP+LC     NPYQRGC+ IDRCRG
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRG

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 62.2e-0547.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+ C +     Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

A8MQM7 Protein RALF-like 151.0e-0539.66Show/hide
Query:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        ILF+ +   ++    YI Y G   GD +  C   HP  C +   NPY+RGC  I+RCR
Subjt:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

A8MRM1 Protein RALF-like 164.9e-0537.7Show/hide
Query:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRC
        F+F  ++ V         A  + YG +KGD  P C  K+P  C +  VN Y RGC  I RC
Subjt:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRC

F4ISE1 Protein RALF-like 124.2e-0438.46Show/hide
Query:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        +G+L +C   I   + + NYIEYG +      +  PGC+    E      VN Y RGCS I RCR
Subjt:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

Q3ECL0 Protein RALF-like 98.1e-0840Show/hide
Query:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG
        ++F+ +   ++    YI Y  + +GD +  C   HP  C + E NPYQRGC  I+RCRGG
Subjt:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 61.6e-0647.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+ C +     Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

AT1G61566.1 ralf-like 95.8e-0940Show/hide
Query:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG
        ++F+ +   ++    YI Y  + +GD +  C   HP  C + E NPYQRGC  I+RCRGG
Subjt:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG

AT2G19040.1 RALF-like 123.0e-0538.46Show/hide
Query:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        +G+L +C   I   + + NYIEYG +      +  PGC+    E      VN Y RGCS I RCR
Subjt:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

AT2G22055.1 RALF-like 157.1e-0739.66Show/hide
Query:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        ILF+ +   ++    YI Y G   GD +  C   HP  C +   NPY+RGC  I+RCR
Subjt:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

AT2G32835.1 RALF-like 163.5e-0637.7Show/hide
Query:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRC
        F+F  ++ V         A  + YG +KGD  P C  K+P  C +  VN Y RGC  I RC
Subjt:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCATCAAAGGAAGCACGTTTATTTTTGTTGGCATTCTCTTTGTTTGTATTGACACGATTGAGATTACAAATGCAAATTACATTGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCTGGATGTAGCGCTAAACATCCTGAACTTTGTGGAAGACCTGAAGTAAACCCATACCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCGA
TGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCATCAAAGGAAGCACGTTTATTTTTGTTGGCATTCTCTTTGTTTGTATTGACACGATTGAGATTACAAATGCAAATTACATTGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCTGGATGTAGCGCTAAACATCCTGAACTTTGTGGAAGACCTGAAGTAAACCCATACCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCGA
TGTCATAG
Protein sequenceShow/hide protein sequence
MAIIKGSTFIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSMS