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Tan0009725 (gene) of Snake gourd v1 genome

Gene IDTan0009725
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG04:38236507..38236758
RNA-Seq ExpressionTan0009725
SyntenyTan0009725
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.7e-1759.49Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKELA
        M  F+ ESR+RT  LEN V +++STV S G +++N+E+Q+SQM T+L T+QKGKFPS  E+NPRE+CK VTLRSGK+L+
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKELA

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]4.3e-1557.69Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        + +FI E R+R +++EN V  +   +  +  SIKN+E+QI Q+A TLNT+QKGKFPSD EV PRE CK VTLRSGKEL
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

XP_022883717.1 uncharacterized protein LOC111400543 [Olea europaea var. sylvestris]1.8e-1351.28Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        + +FI+E+R+R N+ E+ +  + + V++ GA++KN+E+QI Q+AT++ + QKGKFPSDTEVNP+E CK V LRSGK++
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

XP_022893883.1 uncharacterized protein LOC111408348 [Olea europaea var. sylvestris]3.1e-1350Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        + +FI+E+R+R N+ E+ + ++ + V++ GA++KN+E+QI Q+AT++ + QKGKFPSDTEVNP+E CK V LR+GK++
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

XP_035539656.1 uncharacterized protein LOC118344026 [Juglans regia]1.8e-1352.56Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        M SF+ E+  R  + ++ + ++ +  ++ GA+IKNIE+QI Q+ATT+N  Q+G FPS+TEVNPREQCK +TLRSG+EL
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047121.4e-1151.9Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASI-KNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        M SFI E+  R  + ++ + ++ +  ++ GA+I KNIE+QI Q+ATT+N  Q+G FPS+TEVNPREQCK + LRSG+EL
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASI-KNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

A0A2P5B220 Uncharacterized protein3.1e-1144.87Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        +S FI+ES++R N+ E    ++ + +NS GA IK+ E+Q+ Q+ATT+N+ Q+GKFPSD E NP+E C ++ L++G+++
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

A0A6J1DU19 uncharacterized protein LOC1110243612.1e-1557.69Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        + +FI E R+R +++EN V  +   +  +  SIKN+E+QI Q+A TLNT+QKGKFPSD EV PRE CK VTLRSGKEL
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

A0A6J1E1F6 uncharacterized protein LOC1110255511.6e-1280.85Show/hide
Query:  SIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        +IKN+E+QI QMA+TLN +QKGKFPSDTEVNPRE CK VTLRSGKEL
Subjt:  SIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

A0A6P9DWY0 uncharacterized protein LOC1183440268.7e-1452.56Show/hide
Query:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL
        M SF+ E+  R  + ++ + ++ +  ++ GA+IKNIE+QI Q+ATT+N  Q+G FPS+TEVNPREQCK +TLRSG+EL
Subjt:  MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCATTCATCACTGAATCCAGGAATCGAACCAACCAGTTGGAAAATGTAGTGCTAAGTCTAAGTAGCACAGTGAACTCACATGGAGCATCCATCAAGAACATAGA
AATACAAATTAGTCAGATGGCAACCACCCTAAATACGTTGCAGAAAGGTAAGTTTCCTAGTGACACTGAAGTGAATCCTAGGGAACAGTGCAAGGTCGTGACCTTAAGAA
GTGGTAAGGAGCTTGCTTTGGCGAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCATTCATCACTGAATCCAGGAATCGAACCAACCAGTTGGAAAATGTAGTGCTAAGTCTAAGTAGCACAGTGAACTCACATGGAGCATCCATCAAGAACATAGA
AATACAAATTAGTCAGATGGCAACCACCCTAAATACGTTGCAGAAAGGTAAGTTTCCTAGTGACACTGAAGTGAATCCTAGGGAACAGTGCAAGGTCGTGACCTTAAGAA
GTGGTAAGGAGCTTGCTTTGGCGAAAAGGTAA
Protein sequenceShow/hide protein sequence
MSSFITESRNRTNQLENVVLSLSSTVNSHGASIKNIEIQISQMATTLNTLQKGKFPSDTEVNPREQCKVVTLRSGKELALAKR