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Tan0009749 (gene) of Snake gourd v1 genome

Gene IDTan0009749
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein CURVATURE THYLAKOID 1B, chloroplastic
Genome locationLG05:36671897..36673784
RNA-Seq ExpressionTan0009749
SyntenyTan0009749
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR025564 - Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain
IPR033344 - Protein CURVATURE THYLAKOID 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575306.1 Protein CURVATURE THYLAKOID 1B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2778.26Show/hide
Query:  SIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        S A  RKIA NVMAMATGEVPAEVA  E+A+L EIIKKVQE WDKV+DKYAVSSL +SGFVALWAS GVVSAID   +IPGLLELVG GY+G
Subjt:  SIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

XP_004140528.1 protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus]3.0e-2877.08Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  RKIA NVM MATGEVPAEVAAGELA++ EI+KKVQE WDKVEDKYAVSSL +SGFVALWAS GVVSAID   ++PGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

XP_008459821.1 PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis melo]7.9e-2979.17Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  RKIA NVMAMATGEVPAEVAAGELA++ EIIKKVQE WDKVEDKYAVSSL +SGFVALWAS GVVSAID   ++PGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

XP_022929793.1 protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita moschata]5.6e-2778.26Show/hide
Query:  SIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        S A  RKIA NVMAMATGEVPAEVA  E+A+L EIIKKVQE WDKV+DKYAVSSL +SGFVALWAS GVVSAID   +IPGLLELVG GY+G
Subjt:  SIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

XP_038906765.1 protein CURVATURE THYLAKOID 1B, chloroplastic [Benincasa hispida]7.9e-2979.17Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  RK+A NVMAMATGEVPAEVAAGELA++ EIIKKVQE WDKVEDKYAVSSL +SGFVALWAS GVVSAID   +IPGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

TrEMBL top hitse value%identityAlignment
A0A0A0KCB7 CAAD domain-containing protein1.4e-2877.08Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  RKIA NVM MATGEVPAEVAAGELA++ EI+KKVQE WDKVEDKYAVSSL +SGFVALWAS GVVSAID   ++PGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

A0A1S3CCA4 protein CURVATURE THYLAKOID 1B, chloroplastic3.8e-2979.17Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  RKIA NVMAMATGEVPAEVAAGELA++ EIIKKVQE WDKVEDKYAVSSL +SGFVALWAS GVVSAID   ++PGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

A0A5A7T8Q0 Protein CURVATURE THYLAKOID 1B3.8e-2979.17Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  RKIA NVMAMATGEVPAEVAAGELA++ EIIKKVQE WDKVEDKYAVSSL +SGFVALWAS GVVSAID   ++PGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

A0A6J1ET79 protein CURVATURE THYLAKOID 1B, chloroplastic2.7e-2778.26Show/hide
Query:  SIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        S A  RKIA NVMAMATGEVPAEVA  E+A+L EIIKKVQE WDKV+DKYAVSSL +SGFVALWAS GVVSAID   +IPGLLELVG GY+G
Subjt:  SIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

A0A6J1JPR9 protein CURVATURE THYLAKOID 1B, chloroplastic4.7e-2776.04Show/hide
Query:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG
        PW  S A  R+IA NVMAMATGEVPAEVA  E+A+L EIIKKVQE WDKV+DKYAVSSL +SGFVALWAS GVVSAID   +IPGLLELVG GY+G
Subjt:  PWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAID---IIPGLLELVGNGYSG

SwissProt top hitse value%identityAlignment
Q8LCA1 Protein CURVATURE THYLAKOID 1B, chloroplastic6.5e-1842.75Show/hide
Query:  MDKRLIITSQSFTSVRNTSWVKLPFYP------WVTSIALSRKIACNVMAMAT---GEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFV
        +D R   +  +  S  + S + LP  P         + A  RKI  NV+  AT   GE PA     E  +L EI+K  QE W+KV+DKYA+ SL  +G V
Subjt:  MDKRLIITSQSFTSVRNTSWVKLPFYP------WVTSIALSRKIACNVMAMAT---GEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFV

Query:  ALWASVGVVSAID---IIPGLLELVGNGYSG
        ALW S G++SAID   ++PG+LELVG GY+G
Subjt:  ALWASVGVVSAID---IIPGLLELVGNGYSG

Q9M812 Protein CURVATURE THYLAKOID 1C, chloroplastic1.1e-0433.02Show/hide
Query:  TSWVKLPFYPW-----VTSIALSRK-IACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPGL--
        TS  KLPF        ++ ++L+R   + ++M  A+GE      + + +   +++  +Q VWDK ED+  +  L  +G VALWAS+ +++AID +P +  
Subjt:  TSWVKLPFYPW-----VTSIALSRK-IACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPGL--

Query:  -LELVG
          ELVG
Subjt:  -LELVG

Arabidopsis top hitse value%identityAlignment
AT1G52220.1 FUNCTIONS IN: molecular_function unknown7.6e-0633.02Show/hide
Query:  TSWVKLPFYPW-----VTSIALSRK-IACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPGL--
        TS  KLPF        ++ ++L+R   + ++M  A+GE      + + +   +++  +Q VWDK ED+  +  L  +G VALWAS+ +++AID +P +  
Subjt:  TSWVKLPFYPW-----VTSIALSRK-IACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPGL--

Query:  -LELVG
          ELVG
Subjt:  -LELVG

AT1G52220.2 FUNCTIONS IN: molecular_function unknown4.2e-0432.08Show/hide
Query:  TSWVKLPFYPW-----VTSIALSRK-IACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPGL--
        TS  KLPF        ++ ++L+R   + ++M  A+GE      + + +   +++  +Q  WDK ED+  +  L  +G VALWAS+ +++AID +P +  
Subjt:  TSWVKLPFYPW-----VTSIALSRK-IACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPGL--

Query:  -LELVG
          ELVG
Subjt:  -LELVG

AT2G46820.1 photosystem I P subunit4.6e-1942.75Show/hide
Query:  MDKRLIITSQSFTSVRNTSWVKLPFYP------WVTSIALSRKIACNVMAMAT---GEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFV
        +D R   +  +  S  + S + LP  P         + A  RKI  NV+  AT   GE PA     E  +L EI+K  QE W+KV+DKYA+ SL  +G V
Subjt:  MDKRLIITSQSFTSVRNTSWVKLPFYP------WVTSIALSRKIACNVMAMAT---GEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFV

Query:  ALWASVGVVSAID---IIPGLLELVGNGYSG
        ALW S G++SAID   ++PG+LELVG GY+G
Subjt:  ALWASVGVVSAID---IIPGLLELVGNGYSG

AT2G46820.2 photosystem I P subunit4.6e-1942.75Show/hide
Query:  MDKRLIITSQSFTSVRNTSWVKLPFYP------WVTSIALSRKIACNVMAMAT---GEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFV
        +D R   +  +  S  + S + LP  P         + A  RKI  NV+  AT   GE PA     E  +L EI+K  QE W+KV+DKYA+ SL  +G V
Subjt:  MDKRLIITSQSFTSVRNTSWVKLPFYP------WVTSIALSRKIACNVMAMAT---GEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFV

Query:  ALWASVGVVSAID---IIPGLLELVGNGYSG
        ALW S G++SAID   ++PG+LELVG GY+G
Subjt:  ALWASVGVVSAID---IIPGLLELVGNGYSG

AT4G01150.1 unknown protein1.9e-0437.29Show/hide
Query:  EIIKKVQEVWDKVEDKYAVSSLTMSGFVALWAS---VGVVSAIDIIPGLLELVGNGYSG
        E+I  ++E WD +E+K  V        VA+W S   VG ++++ ++P ++ELVG GY+G
Subjt:  EIIKKVQEVWDKVEDKYAVSSLTMSGFVALWAS---VGVVSAIDIIPGLLELVGNGYSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGATAAAAGATTAATAATAACAAGTCAATCATTCACGAGTGTTCGTAACACTAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACATCTATAGCCTTAAG
CAGGAAGATTGCTTGCAATGTGATGGCCATGGCGACTGGAGAAGTGCCAGCGGAAGTGGCTGCAGGGGAGCTGGCGAAGCTGCAGGAAATTATAAAAAAAGTTCAAGAAG
TTTGGGATAAGGTTGAAGATAAGTACGCAGTAAGTTCACTTACAATGTCTGGTTTTGTCGCACTTTGGGCCTCTGTTGGCGTTGTCTCGGCAATTGATATAATTCCTGGC
CTCCTTGAGCTTGTGGGCAATGGCTATTCTGGTGTAAGTTTTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGATAAAAGATTAATAATAACAAGTCAATCATTCACGAGTGTTCGTAACACTAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACATCTATAGCCTTAAG
CAGGAAGATTGCTTGCAATGTGATGGCCATGGCGACTGGAGAAGTGCCAGCGGAAGTGGCTGCAGGGGAGCTGGCGAAGCTGCAGGAAATTATAAAAAAAGTTCAAGAAG
TTTGGGATAAGGTTGAAGATAAGTACGCAGTAAGTTCACTTACAATGTCTGGTTTTGTCGCACTTTGGGCCTCTGTTGGCGTTGTCTCGGCAATTGATATAATTCCTGGC
CTCCTTGAGCTTGTGGGCAATGGCTATTCTGGTGTAAGTTTTATTTAG
Protein sequenceShow/hide protein sequence
MSMDKRLIITSQSFTSVRNTSWVKLPFYPWVTSIALSRKIACNVMAMATGEVPAEVAAGELAKLQEIIKKVQEVWDKVEDKYAVSSLTMSGFVALWASVGVVSAIDIIPG
LLELVGNGYSGVSFI