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Tan0009750 (gene) of Snake gourd v1 genome

Gene IDTan0009750
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCyclin-dependent kinase inhibitor
Genome locationLG01:29958966..29959175
RNA-Seq ExpressionTan0009750
SyntenyTan0009750
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067757.1 hypothetical protein E6C27_scaffold352G00780 [Cucumis melo var. makuwa]1.7e-0975.44Show/hide
Query:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKK-REA-PE-NGYFQVLPDDLERFF
        MDG RTPER EFRIP A++ PPPPRKKPV  VKK REA PE NGYFQ+  DDLERFF
Subjt:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKK-REA-PE-NGYFQVLPDDLERFF

KAF8022732.1 hypothetical protein BT93_F0293 [Corymbia citriodora subsp. variegata]7.0e-1158.82Show/hide
Query:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSCS
        DGC TP R EFRIP+A+ PPPPPRKKP+   KKR  P+NGYFQ  PDDLE  F      A   R +CS
Subjt:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSCS

KAG6607256.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1471.43Show/hide
Query:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVG
        M+G RTPER+EFRI  A VPPPPPRKK VAA KKREAP NGYFQ LPDDLE +F V+  V  G
Subjt:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVG

KAG7036940.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-1473.02Show/hide
Query:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVG
        M+G RTPER+EFRI  A VPPPPPRKK VAA KKREAP NGYFQ LPDDLE +F V+  VA G
Subjt:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVG

XP_018720939.1 cyclin-dependent protein kinase inhibitor SMR4 [Eucalyptus grandis]1.7e-0956.72Show/hide
Query:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSC
        DGC TP R EFRIP+A+ PPPPPRKK   + KKR  P++GYFQ  PDDLE  F      A G R +C
Subjt:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSC

TrEMBL top hitse value%identityAlignment
A0A059D4M4 Uncharacterized protein8.3e-1056.72Show/hide
Query:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSC
        DGC TP R EFRIP+A+ PPPPPRKK   + KKR  P++GYFQ  PDDLE  F      A G R +C
Subjt:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSC

A0A4P1R788 Uncharacterized protein1.2e-0857.63Show/hide
Query:  GCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVA
        GC TP+R E RIP++ VPPPPP+KKP +  KKR  P+NGYFQ  P DLE  F V+S+ +
Subjt:  GCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVA

A0A5A7VKP1 Uncharacterized protein8.3e-1075.44Show/hide
Query:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKK-REA-PE-NGYFQVLPDDLERFF
        MDG RTPER EFRIP A++ PPPPRKKPV  VKK REA PE NGYFQ+  DDLERFF
Subjt:  MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKK-REA-PE-NGYFQVLPDDLERFF

A0A6A4PGK5 Uncharacterized protein2.0e-0860.71Show/hide
Query:  GCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLS
        GC TP+R E RIP+A VPPPPP+KKP +  KKR  P+NGYFQ  P DLE  F ++S
Subjt:  GCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLS

A0A6A5NMJ2 Uncharacterized protein2.0e-0860.71Show/hide
Query:  GCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLS
        GC TP+R E RIP+A VPPPPP+KKP +  KKR  P+NGYFQ  P DLE  F ++S
Subjt:  GCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLS

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR47.5e-0856.6Show/hide
Query:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFF
        +GC TP    +RIP A+V PPPPRKK +  V+KR+ P NGYFQ  P DLE  F
Subjt:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFF

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein5.3e-0956.6Show/hide
Query:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFF
        +GC TP    +RIP A+V PPPPRKK +  V+KR+ P NGYFQ  P DLE  F
Subjt:  DGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCTGCCGTACGCCGGAGCGACGGGAATTTCGGATTCCGTCGGCAGCCGTGCCACCGCCGCCGCCGAGAAAGAAGCCGGTTGCGGCGGTGAAGAAGCGGGAGGC
TCCTGAGAATGGTTATTTTCAAGTACTGCCGGACGATCTTGAACGATTCTTTTCGGTCCTTTCGACCGTAGCAGTCGGTGATCGGAGCAGTTGTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCTGCCGTACGCCGGAGCGACGGGAATTTCGGATTCCGTCGGCAGCCGTGCCACCGCCGCCGCCGAGAAAGAAGCCGGTTGCGGCGGTGAAGAAGCGGGAGGC
TCCTGAGAATGGTTATTTTCAAGTACTGCCGGACGATCTTGAACGATTCTTTTCGGTCCTTTCGACCGTAGCAGTCGGTGATCGGAGCAGTTGTTCCTGA
Protein sequenceShow/hide protein sequence
MDGCRTPERREFRIPSAAVPPPPPRKKPVAAVKKREAPENGYFQVLPDDLERFFSVLSTVAVGDRSSCS