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Tan0009771 (gene) of Snake gourd v1 genome

Gene IDTan0009771
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlow-molecular-weight cysteine-rich 44
Genome locationLG06:16264109..16265078
RNA-Seq ExpressionTan0009771
SyntenyTan0009771
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH10080.1 Gamma-thionin family protein [Prunus dulcis]1.7e-0754.1Show/hide
Query:  FVCIAFLLISGPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL SGPAGA  A   CLG CS+F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FVCIAFLLISGPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

KAF4378121.1 hypothetical protein G4B88_022944 [Cannabis sativa]9.3e-0653.23Show/hide
Query:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

KAF4386996.1 hypothetical protein G4B88_024568 [Cannabis sativa]9.3e-0653.23Show/hide
Query:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1053.16Show/hide
Query:  MASSFVIRSSFLCFVCIAFLLISG----PAGAQN--ADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNST
        MASSF +RSSF   +C+AF+LI+G    P  A N    CLG CS  PNC  ACI AG+  GG C G   +  SCCCNST
Subjt:  MASSFVIRSSFLCFVCIAFLLISG----PAGAQN--ADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNST

XP_012448045.1 PREDICTED: putative defensin-like protein 73 isoform X1 [Gossypium raimondii]1.6e-0545.16Show/hide
Query:  LCFVCIAFLLISGPAGAQNAD---CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCC
        LC + I + L++GP G    +   CLG CS  PNCN++CI  G+  GG+C G   E L+CCC
Subjt:  LCFVCIAFLLISGPAGAQNAD---CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCC

TrEMBL top hitse value%identityAlignment
A0A4Y1S039 Gamma-thionin family protein8.2e-0854.1Show/hide
Query:  FVCIAFLLISGPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL SGPAGA  A   CLG CS+F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FVCIAFLLISGPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A5D2K8R8 Uncharacterized protein7.7e-0645.16Show/hide
Query:  LCFVCIAFLLISGPAGAQNAD---CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCC
        LC + I + L++GP G    +   CLG CS  PNCN++CI  G+  GG+C G   E L+CCC
Subjt:  LCFVCIAFLLISGPAGAQNAD---CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCC

A0A6J5VUM4 Uncharacterized protein7.7e-0649.21Show/hide
Query:  FVCIAFLL--ISGPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL  ++GP GA  A   CLG CS F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FVCIAFLL--ISGPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A7J6G557 Uncharacterized protein4.5e-0653.23Show/hide
Query:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A7J6GVQ0 Uncharacterized protein4.5e-0653.23Show/hide
Query:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FVCIAFLLIS-GPAGAQNAD--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56233.1 Protein of unknown function (PD694200)7.1e-0436.92Show/hide
Query:  VIRSSFLCFVCIAFLLISGPAGAQNADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCC
        ++ SS + +  I   +ISG +      C GAC++ P CNK C   GY+  G+C GS      CCC
Subjt:  VIRSSFLCFVCIAFLLISGPAGAQNADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCC

AT3G06985.1 low-molecular-weight cysteine-rich 442.5e-0438.24Show/hide
Query:  SFVIRSSFLCFVCIAFLLISGPAGAQNADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCN
        SF++ +S    + I FL +SG   A+   C+G+C    +CN ACI  GY   G C G     + CCCN
Subjt:  SFVIRSSFLCFVCIAFLLISGPAGAQNADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCTTTGTCATTCGATCTTCATTCCTATGCTTCGTTTGTATTGCTTTCCTTCTCATCTCTGGGCCAGCAGGTGCCCAAAATGCAGATTGTTTGGGAGCATG
CTCAAATTTTCCAAACTGCAATAAAGCTTGCATCATTGCAGGATATGAGGCAGGCGGTATGTGCACAGGCTCCCCCCTAGAGTCTCTTTCTTGCTGCTGCAACAGTACCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCTTTGTCATTCGATCTTCATTCCTATGCTTCGTTTGTATTGCTTTCCTTCTCATCTCTGGGCCAGCAGGTGCCCAAAATGCAGATTGTTTGGGAGCATG
CTCAAATTTTCCAAACTGCAATAAAGCTTGCATCATTGCAGGATATGAGGCAGGCGGTATGTGCACAGGCTCCCCCCTAGAGTCTCTTTCTTGCTGCTGCAACAGTACCT
AA
Protein sequenceShow/hide protein sequence
MASSFVIRSSFLCFVCIAFLLISGPAGAQNADCLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNST