; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009776 (gene) of Snake gourd v1 genome

Gene IDTan0009776
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMitochondrial 28S Ribosomal protein
Genome locationLG05:3044724..3047299
RNA-Seq ExpressionTan0009776
SyntenyTan0009776
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR032053 - Mitochondrial 28S ribosomal protein S34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605433.1 hypothetical protein SDJN03_02750, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6584.62Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRT ISRALDFSRL+SSFIR+FSTS+ S SSS+P+AS A+SK KRRKKKKNLFEVIQFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PIAEAPKKISGVHKRCWKYI SL +S E+E  TMTNLGESNPSAEVQ+S
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

XP_022947647.1 uncharacterized protein LOC111451448 [Cucurbita moschata]4.1e-6785.9Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVIQFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PIAEAPKKISGVHKRCWKYI SLP+S E+E  TMTNLGESNPSAEVQ+S
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

XP_023007567.1 uncharacterized protein LOC111500023 [Cucurbita maxima]8.2e-6887.18Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PIAEAPKKISGVHKRCWKYI SL +SSE+E  TMTNLGESNPSAEVQTS
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

XP_023532313.1 uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo]8.2e-6886.54Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVIQFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PIAEAPKKISGVHKRCWKYI SLP+SSE+E  TMTNLGESNPSAE QTS
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

XP_038900676.1 uncharacterized protein LOC120087826 [Benincasa hispida]9.1e-6788.31Show/hide
Query:  VANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIA
        VANRTAISRALDFSRLSS+FIR+FSTSSPSTSSSNPNASTAS+K KRRKKKKNLFEV+QFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIA
Subjt:  VANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIA

Query:  HKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        HKDGTPIAEAPKKISGVHKRCWKYIASLP+S           GESNPSAEVQTS
Subjt:  HKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

TrEMBL top hitse value%identityAlignment
A0A0A0KH76 Uncharacterized protein1.0e-6383.97Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRTAISRALDFSRLSSSF+R+FS+SSPSTSSSNPNAS  SS+TKRRKKKKNLFEV+QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+GTPI EAPKKISGVHKRCWKYIASLP S           GES  SAEVQTS
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

A0A1S3CKN2 uncharacterized protein LOC1035020491.7e-6383.97Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNAS +SS+TKRRKKKKNLFEVIQFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PI EAPKKISGVHKRCWKYIASLP+           LGES  SAEVQTS
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

A0A5A7V0Y6 Uncharacterized protein1.7e-6383.97Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNAS +SS+TKRRKKKKNLFEVIQFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PI EAPKKISGVHKRCWKYIASLP+           LGES  SAEVQTS
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

A0A6J1G714 uncharacterized protein LOC1114514482.0e-6785.9Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVIQFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PIAEAPKKISGVHKRCWKYI SLP+S E+E  TMTNLGESNPSAEVQ+S
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

A0A6J1KZ28 uncharacterized protein LOC1115000234.0e-6887.18Show/hide
Query:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG
        M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWG
Subjt:  MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS
        IAHK+G PIAEAPKKISGVHKRCWKYI SL +SSE+E  TMTNLGESNPSAEVQTS
Subjt:  IAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G52370.1 unknown protein3.8e-3963.97Show/hide
Query:  MSVANRTAISR--ALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKA
        M++ NR AISR   +   RLS + +R+FS +  S      N S+ SSK KRR KKKNL EV QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKA
Subjt:  MSVANRTAISR--ALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKA

Query:  WGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSS
        WGI HKDG   AEAPKKISGVHKRCWKYI +L K++
Subjt:  WGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSS

AT5G58990.1 unknown protein8.6e-3962.77Show/hide
Query:  MSVANRTAISR--ALDFSRLSSSFIRSFSTS-SPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGK
        M++ NR AISR   +    LS S +R+FS + S +++ ++ N S+ S+K KRR KKKNL EV QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGK
Subjt:  MSVANRTAISR--ALDFSRLSSSFIRSFSTS-SPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGK

Query:  AWGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSS
        AWGI HKDG   AEAPKKISGVHKRCWKYI +L K++
Subjt:  AWGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGATTATCTTCTAGCTTTATCAGAAGCTTCAGTACGTCTTCGCCGTCAACGTCTTCTTCGAA
CCCCAATGCCTCGACTGCTTCGAGTAAAACCAAGCGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAATTCAGTTTTTGCCCAATTGGGGTGTAGGATACCATGTCGCCA
AGGCTCACTGGGATGAAATATCGTATCAGATCACCAAAATCAACCTATACAAGAGTGGTACGCATGGCAAGGCATGGGGCATCGCTCATAAAGATGGCACGCCCATTGCA
GAAGCTCCAAAGAAAATAAGCGGAGTTCACAAGCGTTGTTGGAAGTATATCGCAAGCTTGCCAAAATCATCGGAGAGTGAATCAATCACAATGACGAATTTGGGAGAAAG
CAACCCATCAGCTGAAGTTCAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAATTACAATTTCCCAGCCACTTGCCGAAGCCCCGTGGAGCAGTGAAATAGCGATACCAGAGAGAAGGGCAACCAAACCTAGAGAGAGAGACGCCAATGTCTGTCGC
CAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGATTATCTTCTAGCTTTATCAGAAGCTTCAGTACGTCTTCGCCGTCAACGTCTTCTTCGAACCCCAATGCCT
CGACTGCTTCGAGTAAAACCAAGCGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAATTCAGTTTTTGCCCAATTGGGGTGTAGGATACCATGTCGCCAAGGCTCACTGG
GATGAAATATCGTATCAGATCACCAAAATCAACCTATACAAGAGTGGTACGCATGGCAAGGCATGGGGCATCGCTCATAAAGATGGCACGCCCATTGCAGAAGCTCCAAA
GAAAATAAGCGGAGTTCACAAGCGTTGTTGGAAGTATATCGCAAGCTTGCCAAAATCATCGGAGAGTGAATCAATCACAATGACGAATTTGGGAGAAAGCAACCCATCAG
CTGAAGTTCAAACTTCATGACTGCAGATAAATTTAAGCTGCTGATTCTTTTTGGCCAACCTTATTTCCTGATTCACAGAGTTCTAGTCTCTCCAGATTAGCAGCCCTTAA
ACATAGTCAGGTTTCTTAACTCCATTATATGAGGGGCATTCTGTGTTTTACTTGTTTCCGAGATAAAAGAAAGATCAATCATCCCGAACTAAGTTTGGTTTTGAAGATGA
ATTGAGGCAGCTTACATGGATTCAGGATTCAAGTGGTTCAGATTGTAAGGATGTTTGTTGGTTAAAATAAATTG
Protein sequenceShow/hide protein sequence
MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIA
EAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS