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Tan0009778 (gene) of Snake gourd v1 genome

Gene IDTan0009778
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:49622972..49630669
RNA-Seq ExpressionTan0009778
SyntenyTan0009778
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013803.1 hypothetical protein SDJN02_23970, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1574.24Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLRS----LRIKVVMTRNQLQQLMAMADLRLSDDLGLLILQECCKG
        MGNW+GK R  +IHPIEG EGLRS    LRIKVVMTRNQL++LMAMADL L DDL  LILQECC+G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLRS----LRIKVVMTRNQLQQLMAMADLRLSDDLGLLILQECCKG

VVA25557.1 PREDICTED: POPTR_0014s10080g [Prunus dulcis]2.0e-0445.95Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLR------SLRIKVVMTRNQLQQLMAMADL------RLSDDLGLLILQECCKG
        MGNWVG+  K L+HP E  + +R      SL +KV MT  QL++LMA  D+      R S++LG +ILQEC +G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLR------SLRIKVVMTRNQLQQLMAMADL------RLSDDLGLLILQECCKG

XP_024197720.1 uncharacterized protein LOC112200945 [Rosa chinensis]1.5e-0444.44Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLRS------LRIKVVMTRNQLQQLMAMADLR----LSDDLGLLILQECCKG
        MGNWVGK R   +HP++  EGL        +RIK+ MT+ +L++LMA  D+      S++LG LIL+EC +G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLRS------LRIKVVMTRNQLQQLMAMADLR----LSDDLGLLILQECCKG

TrEMBL top hitse value%identityAlignment
A0A5E4FCI7 PREDICTED: POPTR_0014s10080g9.8e-0545.95Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLR------SLRIKVVMTRNQLQQLMAMADL------RLSDDLGLLILQECCKG
        MGNWVG+  K L+HP E  + +R      SL +KV MT  QL++LMA  D+      R S++LG +ILQEC +G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLR------SLRIKVVMTRNQLQQLMAMADL------RLSDDLGLLILQECCKG

A0A5N6QMG2 Uncharacterized protein8.3e-0449.21Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLRSLRIKVVMTRNQLQQLMAMADLRLSD-DLGLLILQECCKG
        MGNW G  RK+++HP+  +     LR+KV MT+ QL++LM   DL   D +LG LILQEC +G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLRSLRIKVVMTRNQLQQLMAMADLRLSD-DLGLLILQECCKG

B9RNJ7 Uncharacterized protein6.3e-0447.62Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLRSLRIKVVMTRNQLQQLMAMADLRLSD-DLGLLILQECCKG
        MGN +G  RKQ++HP+E       LRIKV M+  QL++ M+  DLR  D +LG ++LQEC  G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLRSLRIKVVMTRNQLQQLMAMADLRLSD-DLGLLILQECCKG

M5X856 Uncharacterized protein (Fragment)8.3e-0444.59Show/hide
Query:  MGNWVGKSRKQLIHPIEGQEGLR------SLRIKVVMTRNQLQQLMAMADL------RLSDDLGLLILQECCKG
        MGNWVG+  K L+ P E  + +R      SL +KV MT  QL++LMA  D+      R S++LG +ILQEC +G
Subjt:  MGNWVGKSRKQLIHPIEGQEGLR------SLRIKVVMTRNQLQQLMAMADL------RLSDDLGLLILQECCKG

V4U720 Uncharacterized protein8.3e-0437.5Show/hide
Query:  MGNWVGKSRKQLIHPIE----------GQEGLRSLRIKVVMTRNQLQQLMAMADLRLSDD------LGLLILQECCKGDV
        MG+W GK +   +HP++           ++   +LRIKV++++NQL +LMA  DL   DD      LG +ILQEC +G++
Subjt:  MGNWVGKSRKQLIHPIE----------GQEGLRSLRIKVVMTRNQLQQLMAMADLRLSDD------LGLLILQECCKGDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGGGTGGGAAAGAGCAGGAAGCAGCTGATACACCCAATTGAGGGTCAGGAAGGGCTGAGAAGTTTGAGGATCAAAGTAGTGATGACTCGAAACCAGCTACA
GCAGCTCATGGCTATGGCTGACCTCAGATTGAGTGATGATTTAGGCCTCTTGATTTTGCAAGAATGCTGCAAAGGAGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
AGACATTATACGTTTGTGTTTAATACAAGTGTTCCATAAAACAATTCCCAAAGGCAAATAAAAAAGAAAAAAAGAGAGATGGGAAATTGGGTGGGAAAGAGCAGGAAGCA
GCTGATACACCCAATTGAGGGTCAGGAAGGGCTGAGAAGTTTGAGGATCAAAGTAGTGATGACTCGAAACCAGCTACAGCAGCTCATGGCTATGGCTGACCTCAGATTGA
GTGATGATTTAGGCCTCTTGATTTTGCAAGAATGCTGCAAAGGAGATGTGTAAAAGAAAAAAAATTACAAAAACCCATAAGGGCATTTTAGACATTTTATCCGAAGGGCA
AAATGGTCTTTATACCCTAAATGGCGTGTTTGTAATTATCAAACTAGGGCAACATCTTCTTGTGATAAAAGGAAAAGAAGAGAGG
Protein sequenceShow/hide protein sequence
MGNWVGKSRKQLIHPIEGQEGLRSLRIKVVMTRNQLQQLMAMADLRLSDDLGLLILQECCKGDV