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Tan0009801 (gene) of Snake gourd v1 genome

Gene IDTan0009801
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG04:36908153..36908521
RNA-Seq ExpressionTan0009801
SyntenyTan0009801
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035138.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.2e-2351.61Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA +KW  FS+LVETALRVE+S+ +++       G  TT       + F+  + RRF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPG--ISGKGSFKPHRGGQTTPRI
        TPG  IS +  FK   GGQ +  +
Subjt:  TPG--ISGKGSFKPHRGGQTTPRI

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.1e-2250.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA + W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         P +S +GSFK    G +
Subjt:  TPGISGKGSFKPHRGGQT

KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.3e-2249.15Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT++EYEK +TELSKYA++++  E  RCKRF++GLR EIRTPV AS+ W +F KLVE ALRVE+SL ++R  +        T+S  + R+R  +G +  F
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         PG+S KG+FK    G +
Subjt:  TPGISGKGSFKPHRGGQT

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]4.8e-2350.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA + W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         PG+S +G+FK    G +
Subjt:  TPGISGKGSFKPHRGGQT

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.1e-2250.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA + W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         P +S +GSFK    G +
Subjt:  TPGISGKGSFKPHRGGQT

TrEMBL top hitse value%identityAlignment
A0A5A7SX06 DNA/RNA polymerases superfamily protein4.0e-2351.61Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA +KW  FS+LVETALRVE+S+ +++       G  TT       + F+  + RRF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPG--ISGKGSFKPHRGGQTTPRI
        TPG  IS +  FK   GGQ +  +
Subjt:  TPG--ISGKGSFKPHRGGQTTPRI

A0A5A7T1M0 Reverse transcriptase1.5e-2250.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA + W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         P +S +GSFK    G +
Subjt:  TPGISGKGSFKPHRGGQT

A0A5A7TG44 DNA/RNA polymerases superfamily protein2.6e-2249.15Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT++EYEK +TELSKYA++++  E  RCKRF++GLR EIRTPV AS+ W +F KLVE ALRVE+SL ++R  +        T+S  + R+R  +G +  F
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         PG+S KG+FK    G +
Subjt:  TPGISGKGSFKPHRGGQT

A0A5A7UZM6 Gag protease polyprotein-like protein2.3e-2350.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA + W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         PG+S +G+FK    G +
Subjt:  TPGISGKGSFKPHRGGQT

A0A5D3BB91 Reverse transcriptase1.5e-2250.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA + W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPHRGGQT
         P +S +GSFK    G +
Subjt:  TPGISGKGSFKPHRGGQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAAAGGTTCGAGGATGGTTTACGAGC
AGAGATCCGAACACCTGTGACTGCAAGTTCTAAGTGGGCTGAGTTCTCCAAGCTTGTGGAGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAG
GAGCTGTAGGTGGTGGTCATACCACTTATTCTGTTGGTTTACCACGAGACCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTATCTCTGGAAAAGGAAGCTTT
AAACCCCATCGTGGTGGGCAAACTACTCCAAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAAAGGTTCGAGGATGGTTTACGAGC
AGAGATCCGAACACCTGTGACTGCAAGTTCTAAGTGGGCTGAGTTCTCCAAGCTTGTGGAGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAG
GAGCTGTAGGTGGTGGTCATACCACTTATTCTGTTGGTTTACCACGAGACCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTATCTCTGGAAAAGGAAGCTTT
AAACCCCATCGTGGTGGGCAAACTACTCCAAGGATCTGA
Protein sequenceShow/hide protein sequence
MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSKWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRFTPGISGKGSF
KPHRGGQTTPRI